Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq294625 86.0 5e-12 >seq294625 Length=4757 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 12841 ATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTT 12900 ||| ||||| ||||| ||| ||||| || | ||||||||| || || || || || || Sbjct 3771 ATTCGACATCACAGATGCTTTCTGATACTCTCCAACTCTTTTCTCGAAGAAATTCGTCTT 3830 Query 12901 TCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTT 12960 |||| ||||||||| ||||| ||||||| ||||| | | || |||| Sbjct 3831 CCCTTGTAACGAAATCAGCTCCATCCAATCGAATGGATTCTGTGCGTTGTACAATTTCCC 3890 Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020 ||| || ||| | || | ||||||||||| ||||| ||||||| |||| | || Sbjct 3891 ACATCCCAATGACACCAAAAGCCTGTCAGCAACGAACTCGATGTACTTACTCATGAGGTC 3950 Query 13021 ACAGTTCATTCC 13032 || ||||| || Sbjct 3951 ACCATTCATCCC 3962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428545688272212