Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq294625 86.0 5e-12
>seq294625
Length=4757
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 12841 ATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTT 12900
||| ||||| ||||| ||| ||||| || | ||||||||| || || || || || ||
Sbjct 3771 ATTCGACATCACAGATGCTTTCTGATACTCTCCAACTCTTTTCTCGAAGAAATTCGTCTT 3830
Query 12901 TCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTT 12960
|||| ||||||||| ||||| ||||||| ||||| | | || ||||
Sbjct 3831 CCCTTGTAACGAAATCAGCTCCATCCAATCGAATGGATTCTGTGCGTTGTACAATTTCCC 3890
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
||| || ||| | || | ||||||||||| ||||| ||||||| |||| | ||
Sbjct 3891 ACATCCCAATGACACCAAAAGCCTGTCAGCAACGAACTCGATGTACTTACTCATGAGGTC 3950
Query 13021 ACAGTTCATTCC 13032
|| ||||| ||
Sbjct 3951 ACCATTCATCCC 3962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428545688272212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |