Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq259261 168 2e-36
seq284040 163 7e-35
seq156932 149 1e-30
seq228143 145 2e-29
seq62239 129 1e-24
seq25275 129 1e-24
seq304067 113 1e-19
seq243249 113 1e-19
seq141081 113 1e-19
seq277754 107 4e-18
seq268484 100 7e-16
seq118537 93.3 1e-13
seq276382 91.5 3e-13
>seq259261
Length=7884
Score = 168 bits (186), Expect = 2e-36
Identities = 171/222 (77%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||| || | ||||| || ||
Sbjct 2587 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCTGCCGTCC 2528
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || |||||||||||||| |||||||||||||| || ||||| |||
Sbjct 2527 TCGAGCTGTTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCC 2468
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| |||| ||||| | | ||| || |||||||||||||||
Sbjct 2467 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGGATTCGACCTCCAACGTGATCGTC 2408
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGCC 199639
|| ||||| || |||||||| || || || |||||| |||
Sbjct 2407 TTCCCCGTTAGGGTTTTCACGAAGATCTG---CATTTTCGCC 2369
>seq284040
Length=2693
Score = 163 bits (180), Expect = 7e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || || || | || |||||||| |||| |||||| || |||||||||||||| ||
Sbjct 971 CAGAACCAGATGCAACGTGGACTCCTTCTGGATGTTGTAATCGGCCAAAGTCCTTCCGTC 912
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||||||||| | ||||||||||||||| |||||||| ||
Sbjct 911 TTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTC 852
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| ||||||| |||| ||||| | |||| || ||||||||||||||
Sbjct 851 CTGAATCTTCGCCTTCACGTTATCGATCGTGTCGGAGCTTTCCACCTCCAACGTGATCGT 792
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || ||||| || || ||
Sbjct 791 TTTTCCGGTCAACGTCTTCACGAAGATCTG 762
Score = 156 bits (172), Expect = 1e-32
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||||||||||||||| |||| ||||||||| || | || || || ||
Sbjct 742 AGAACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTTCTGCCGTCC 683
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||
Sbjct 682 TCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCC 623
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| || || | | || || |||| ||||| |||
Sbjct 622 TGGATCTTCGCCTTGACGTTATCGATCGTATCGGAGCTCTCGACCTCCAGAGTGATGGTC 563
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || ||||| || || || ||
Sbjct 562 TTGCCGGTTAGGGTTTTGACGAAGATCTG 534
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || || || |||||||| ||||| |||| ||||||||| || | ||
Sbjct 523 CGAAGCCGTAGCACCAGATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGCTAGGGTT 464
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| || || |||||||||||||||||||||||||| |||||||| || ||| |||||||
Sbjct 463 CTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGAATTCCT 404
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| || || | | || || ||||
Sbjct 403 TCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCGGAGCTCTCGACCTCCAGA 344
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || || || ||||| || || || ||
Sbjct 343 GTGATTGTTTTGCCGGTTAGGGTTTTGACGAAGATCTG 306
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || |||||||| || || |||||||| |||| |||||| || |||| ||||
Sbjct 1207 CGAAGACGAAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGAGTC 1148
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||||||||||||||||| || || | | |||||||||||| ||| ||
Sbjct 1147 CGGCCATCTTCCAGCTGCTTTCCGGCAAATATCAACCTCTGCTGGTCCGGTGGAATCCCC 1088
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||||||||| ||| || |||| || || | | || || ||||
Sbjct 1087 TCTTTATCCTGAATCTTGGCCTTGACATTATCGATCGTATCGGAGCTCTCCACCTCCAGA 1028
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || || | || ||||| || || ||
Sbjct 1027 GTAATCGTCTTCCCGGTCAACGTCTTCACGAATATCTG 990
Score = 93.3 bits (102), Expect = 1e-13
Identities = 71/84 (85%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
||||||||||| |||||| | ||||| |||||||||||||||||||||||| |||||||
Sbjct 888 ATCTTCGCCGGCAAGCAGCTCGAAGACGGAAGGACTTTGGCCGATTACAACATCCAGAAG 947
Query 200998 GAGTCTACTCTTCACCTTGTTTTG 201021
||||| || | || || ||| ||
Sbjct 948 GAGTCCACGTTGCATCTGGTTCTG 971
Score = 91.5 bits (100), Expect = 3e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|| || |||||||||||| |||||||||| ||||| |||| ||||||||| |||||||
Sbjct 1116 ATATTTGCCGGAAAGCAGCTGGAAGATGGCCGGACTCTGGCGGATTACAACATCCAGAAG 1175
Query 200998 GAGTCTACTCTTCACCTTGT 201017
||||| || || ||||||||
Sbjct 1176 GAGTCCACCCTGCACCTTGT 1195
>seq156932
Length=6713
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
||||| ||||| || || ||||| ||||| |||| |||||| || || | ||||| |||
Sbjct 3769 CTCAGCACAAGATGCAGGGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGCCCA 3828
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||||||||| |||||||| |||||||| | || ||||| || ||||||||
Sbjct 3829 TCTTCCAGCTGTTTTCCGGCAAAGATGAGTCTTTGTTGGTCTGGTGGGATTCCTTCCTTG 3888
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| |||||||| |||||| |||| ||| || | | || || ||||| ||||||
Sbjct 3889 TCTTGAATCTTGGCTTTCACGTTGTCGATGGTATCCGAGCTCTCGACTTCCAAAGTGATC 3948
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || ||||| ||||| || ||||| ||
Sbjct 3949 GTCTTCCCAGTGAGGGTTTTGACGAAAATCTG 3980
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| |||||||||||||| |||| ||||| || || | ||| | |||||
Sbjct 3544 AGAACAAGGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCATCC 3603
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || ||||| || | | ||||||||| || ||| ||||| |||
Sbjct 3604 TCCAACTGCTTCCCTGCGAATATCAACCTCTGCTGGTCTGGTGGAATCCCTTCCTTATCC 3663
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| |||||| || | ||| || | | || || ||||| |||||||||
Sbjct 3664 TGAATCTTTGCCTTCACATTGTCAATGGTATCCGAGCTCTCCACCTCCAAGGTGATCGTC 3723
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || || ||||| ||
Sbjct 3724 TTCCCGGTTAAAGTCTTGACGAAAATCTG 3752
Score = 107 bits (118), Expect = 4e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||| || |||||||| |||| ||||||||| || | ||| | || ||
Sbjct 4000 AGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTACGGCCGTCC 4059
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || || || ||||||||||| | ||||||||||| || || ||||| ||
Sbjct 4060 TCGAGTTGTTTACCGGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 4119
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | ||||||| || | ||||| ||
Sbjct 4120 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCTACTTCAAGAGTGATGGTT 4179
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || || || |||||
Sbjct 4180 TTGCCGGTCAAGGTCTTGACGAAGATTTG 4208
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||| || ||||||||||||| ||||||||| || | ||| | || ||
Sbjct 4228 AGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGGCCGTCC 4287
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || ||||| ||||| || | |||||| || ||| ||| ||||| ||
Sbjct 4288 TCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCT 4347
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | || || | | || || || | ||||| |||
Sbjct 4348 TGGATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTC 4407
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 4408 TTGCCAGTGAGGGTCTTAACGAATATCTG 4436
Score = 84.2 bits (92), Expect = 5e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|| ||||| || ||||||||||| ||||| | ||| | || |||||||| |||||||
Sbjct 3626 ATATTCGCAGGGAAGCAGTTGGAGGATGGTCGTACTCTTGCGGATTACAATATCCAGAAG 3567
Query 200998 GAGTCTACTCTTCACCTTGTT 201018
||||| |||||||||||||||
Sbjct 3566 GAGTCGACTCTTCACCTTGTT 3546
>seq228143
Length=6931
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| | ||| || ||||||||||| |||| ||||||||| || | ||
Sbjct 2861 CGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTT 2802
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||||||||||||||||||||| || || | ||||||||| ||| || |||
Sbjct 2801 CGGCCGTCTTCCAGCTGCTTTCCGGCGAAAATAAGTCTCTGCTGGTCTGGAGGGATGCCT 2742
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || || ||||| ||| ||| || | |||||| | |||| || || ||
Sbjct 2741 TCTTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACTTCTAAT 2682
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | |||||||||||||| ||
Sbjct 2681 GTGATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTG 2644
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||||| || || ||||| |||| ||||||||| || ||||| | ||||||
Sbjct 2396 AGGACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTACGGCCATCT 2337
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||| |||||||| | |||||||| || ||| ||||| ||
Sbjct 2336 TCGAGCTGCTTTCCGGCAAAGATGAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 2277
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||||| | | || || || | ||||| |||
Sbjct 2276 TGGATCTTGGCCTTGACGTTGTCGATTGTGTCGGAACTCTCAACCTCGAGAGTGATTGTC 2217
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| || ||
Sbjct 2216 TTTCCAGTGAGGGTCTTAACAAAGATCTG 2188
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| || || ||||||||||| |||| |||||| |||||||| || | ||||||
Sbjct 3308 AGCACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAACGTACGCCCATCT 3249
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| ||||| || || ||||| | | |||||||||||| || ||||| |||
Sbjct 3248 TCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCC 3189
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| || | |||||| | | || || ||||| ||||| |||
Sbjct 3188 TGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAACTCTCGACCTCCAAAGTGATGGTC 3129
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || |||||||| ||
Sbjct 3128 TTTCCAGTCAACGTCTTAACAAAAATCTG 3100
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| || ||||| ||||||||||| |||| |||||||||||| | ||
Sbjct 3089 CGAAGACGGAGGACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTT 3030
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||||||| || || || ||||| | | ||| ||||| || || |||
Sbjct 3029 CGGCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGGATGCCT 2970
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| ||||| || | |||||||| | || || |||||
Sbjct 2969 TCCTTATCTTGGATCTTAGCTTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAAA 2910
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | || || || ||||| ||
Sbjct 2909 GTGATGGTCTTTCCGGTCAAGGTCTTAACGAAAATCTG 2872
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| || || || ||||| || || | ||| || ||||| | ||||| ||||||
Sbjct 3536 AGCACAAGATGCAGGGTAGACTCTTTCTGAATGTTATAATCAGCAAGTGTCCTCCCATCT 3477
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || || ||||| | | |||||| ||||| || || || ||
Sbjct 3476 TCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCT 3417
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| |||||| || | || || | |||| || |||| |||||||||
Sbjct 3416 TGGATCTTTGCCTTCACATTATCAATCGTATCCGAGCTTTCCACCTCCAGAGTGATCGTC 3357
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || || || || ||
Sbjct 3356 TTTCCAGTCAACGTCTTAACGAATATCTG 3328
>seq62239
Length=9780
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || |||||||| |||| ||||||||| || | ||||| || ||
Sbjct 5346 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCTGCCGTCC 5405
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| |||||||||||||| || ||||||||||| || ||||| ||
Sbjct 5406 TCGAGCTGCTTCCCGGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCT 5465
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | ||| || || | || || ||
Sbjct 5466 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTT 5525
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || |||||||| || || ||
Sbjct 5526 TTCCCGGTTAGGGTTTTCACGAAGATCTG 5554
>seq25275
Length=8276
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || || |||||||| |||| ||| ||||| || | ||| | || ||
Sbjct 5002 AGAACCAAGTGAAGGGTTGACTCCTTCTGGATGTTATAGTCGGCAAGAGTACGGCCGTCC 4943
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||| ||||| || | ||||||||| || ||| ||||| ||
Sbjct 4942 TCGAGCTGCTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCT 4883
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||| || ||||||| || | |||||| | |||| || |||| |||||| ||
Sbjct 4882 TGAATTTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAGCGTGATGGTT 4823
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| ||||| ||||| |||||
Sbjct 4822 TTGCCGGTGAGGGTTTTGACAAAGATTTG 4794
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || || |||||||| || | |||||| || |||||||| | || ||
Sbjct 5230 AGAACCAAGTGAAGGGTGGACTCCTTCTGTATGTTGTAATCGGCCAAAGTGCGACCGTCC 5171
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||| ||||| | | ||||||||| || ||| || || ||
Sbjct 5170 TCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 5111
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||||||| |||| ||||| | | || || ||||||||||| ||
Sbjct 5110 TGGATTTTCGCCTTCACGTTATCGATAGTGTCCGAGCTCTCGACTTCCAACGTGATGGTT 5051
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || ||||| ||||| |||||
Sbjct 5050 TTCCCTGTTAGGGTTTTGACAAAGATTTG 5022
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || ||||| ||||| || | |||||||||||| | || | ||||| || ||||||
Sbjct 5677 TGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGCAAGCGTACGACCATCCTCGAGCTGC 5618
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || || ||||| || | ||||||||| || || || || || ||||||||
Sbjct 5617 TTACCCGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTATCTTGAATCTTA 5558
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||||||| |||| |||||| | | || || || | ||||| ||||| || ||
Sbjct 5557 GCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTTCCGGTC 5498
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| || |||||||| || ||
Sbjct 5497 AATGTCTTCACAAAGATCTG 5478
Score = 100 bits (110), Expect = 7e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | || || || |||||||| |||| ||| || || || | ||||
Sbjct 6151 CGAAGACGAAGAACCAAATGAAGGGTAGACTCCTTCTGGATGTTATAATCCGCAAGAGTC 6092
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|||||||| || |||||||| || || || || || | |||||| ||||| || ||
Sbjct 6091 CTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTGGGATCCCC 6032
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||||| |||| ||||| | | || || |||| |
Sbjct 6031 TCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCCGAACTCTCCACCTCCAGC 5972
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | || || ||||| || ||
Sbjct 5971 GTGATGGTCTTCCCTGTCAACGTCTTAACAAAGATCTG 5934
>seq304067
Length=4417
Score = 113 bits (124), Expect = 1e-19
Identities = 85/100 (85%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| ||||||||||| |||| ||||||||| || | || || || ||
Sbjct 100 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCC 41
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCG 199517
|| |||||||| |||||||||||||| |||||||||||||
Sbjct 40 TCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCG 1
>seq243249
Length=1014
Score = 113 bits (124), Expect = 1e-19
Identities = 146/200 (73%), Gaps = 9/200 (5%)
Strand=Plus/Plus
Query 199436 GACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCG 199495
||||||||||||| | ||||||| || | || || || || || ||||| |||||||||
Sbjct 759 GACTCCTTTTGGATGCTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTCCGGCG 818
Query 199496 AAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACG 199555
|||||||| || ||||||||||| || ||||| | || || | ||||||
Sbjct 819 AAGATGAGCCGTTGCTGGTCCGGCGGGATGCCTTC-----CTTG--TCGGCT--TTCACG 869
Query 199556 GATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTC 199615
| || |||||| | | || || |||||||| || ||||| || || |||||||||
Sbjct 870 TTGTAGATGGTGTCGGAGGACTCAACCTCCAACGTTATGGTCTTGCCGGTTAGAGTTTTC 929
Query 199616 ACAAAAATTTGGTACATTTT 199635
||||| || || | ||| ||
Sbjct 930 ACAAAGATCTGCTGCATCTT 949
>seq141081
Length=4874
Score = 113 bits (124), Expect = 1e-19
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||||| |||||||| ||||||||||||||||| | || | || |||
Sbjct 2008 AGGACCAAATGGAGAGTGGACTCCTTCTGGACGTTGTAGTCAGCAAGGGTTCGACCGTCT 2067
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||| || |||| || || || || | ||||||||| || || | |||| ||
Sbjct 2068 TCCAGTTGTTTTCTAGCAAAAATAAGTCTCTGCTGGTCTAGAGGGATGCATTCTTTGTCT 2127
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||| | || || ||||||| |||| || || || ||||| |||
Sbjct 2128 TGGATCTTGGCCTTCATGTTGTCAACAGTGTCTGAGCTTTCGACCTCTAAAGTGATGGTC 2187
Query 199598 TTACCCGTGAGAGTTTTCACAAAAA 199622
|| | || | ||| ||||| ||||
Sbjct 2188 TTTTCAGTCAAAGTCTTCACCAAAA 2212
>seq277754
Length=2847
Score = 107 bits (118), Expect = 4e-18
Identities = 152/212 (72%), Gaps = 9/212 (4%)
Strand=Plus/Minus
Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483
|| ||||| || ||||||||||||| ||||||||| || | || || || || || ||
Sbjct 2783 AGATGGAGCGTAGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTACCGTCCTCGAGT 2724
Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543
|| ||||||||||||||||| || ||||||||||| || ||||| | || ||
Sbjct 2723 TGTTTTCCGGCGAAGATGAGCCGTTGCTGGTCCGGTGGGATGCCTTC-----CTTG--TC 2671
Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603
| |||||| | || |||||| | | || || |||| ||| || ||||| ||
Sbjct 2670 GGCT--TTCACGTTGTAGATGGTGTCGGAGGACTCAACCTCCAGCGTTATGGTCTTGCCG 2613
Query 199604 GTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || |||||||| || || || | ||| ||
Sbjct 2612 GTTAGGGTTTTCACGAAGATCTGCTGCATCTT 2581
>seq268484
Length=6331
Score = 100 bits (110), Expect = 7e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| |||| ||||||||| || | | | || || || |||| ||||||||||||
Sbjct 937 TCCTTCTGGATGTTGTAGTCGGCTAGGGGTCCGCCGTCCTCGAGCTATTTTCCGGCGAAG 996
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
||||| |||| |||||||| || ||||| || || ||||| ||||||
Sbjct 997 ATGAGGCGCTACTGGTCCGACGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTG 1056
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618
|||| |||||| | | || || ||||||||||| | ||| || || || ||||||||
Sbjct 1057 TCGATGGTGTCGGAGGACTCGACCTCCAACGTGATGGCCTTGCCGGTTAGGGTTTTCACG 1116
Query 199619 AAAATTTG 199626
|| || ||
Sbjct 1117 AAGATCTG 1124
>seq118537
Length=769
Score = 93.3 bits (102), Expect = 1e-13
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| |||| |||||||| || | || || || || || ||||| ||| |||| |||
Sbjct 280 TCCTTCTGGATATTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTTCGGCAAAG 339
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
|||| || ||||||||||| | ||||| || || ||||| ||||||
Sbjct 340 TTGAGGCGTTGCTGGTCCGGCGGGAAGCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTG 399
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTT 199614
||||||||||| | | || || ||||||||||| ||||| || | || |||||
Sbjct 400 TCGACGGTGTCGGAGGACTCGACCTCCAACGTGATGGTCTTGCCGATTAGGGTTTT 455
>seq276382
Length=2823
Score = 91.5 bits (100), Expect = 3e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480
|| || ||||| ||||||||||| |||| ||||||||| || | || | |||||||
Sbjct 1901 ACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTTCGGCCATCTTGA 1842
Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540
|||||||||||||| || || | | || ||||| || || || || || ||
Sbjct 1841 AGCTGCTTTCCGGCAAATATCAACCTCTATTGGTCTGGTGGGATGCCCTCCTTATCTTGG 1782
Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600
|||||| ||||| || | |||||||| | || || ||||| || ||||||||
Sbjct 1781 ATCTTTGCTTTCACATTGTCAATGGTGTCTGAACTCTCGACCTCCAAAGTTATCGTCTTT 1722
Query 199601 CCCGT 199605
|| ||
Sbjct 1721 CCGGT 1717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1171914330951702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |