Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq293582 123 3e-23
>seq293582
Length=2029
Score = 123 bits (136), Expect = 3e-23
Identities = 173/240 (72%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || ||||| |||| ||||| | || || ||| || || ||||| || ||
Sbjct 1312 TGCAGGCCTTCGTCCCTCGAGATCAATTCGTTGGAGAACGTTAGGCCCGGCATCAGGCCG 1371
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct 1372 CGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTTCCGGAGAAGAAGATGCCCTCGACACAG 1431
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686
||||| |||| | ||||| || || | ||| ||| ||||| ||| ||| |||||
Sbjct 1432 GCGAAGGCGACGATCCGCTCCGCGAAGGACTCG-GACCCGTCGATCCAGCGGAGGGCCCA 1490
Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTC 119746
| |||||| |||| |||||||||| || | | ||| | ||| || | ||||| ||
Sbjct 1491 CTGGGCCTTCCGCTGGATGCAGGGGATGGTCTCCACGGCGTGGAACAGCCGGTTCTTCTC 1550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 585560631246800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |