Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq107965 369 4e-97
seq169634 255 7e-63
seq300680 201 1e-46
seq250312 188 8e-43
seq10884 134 2e-26
seq254652 132 5e-26
seq8631 123 3e-23
seq36621 111 2e-19
>seq107965
Length=6474
Score = 369 bits (408), Expect = 4e-97
Identities = 438/594 (74%), Gaps = 0/594 (0%)
Strand=Plus/Minus
Query 84194 AGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGC 84253
||||||| |||||||| |||||| |||||||| | || || || || || ||| |
Sbjct 6469 AGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAAC 6410
Query 84254 AGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGAC 84313
|| || |||||||||||||| |||||| |||| || ||||||| | || ||
Sbjct 6409 GGCTACGATATTATAAGTTTCATCTTCTAGACCAAATCTGTAACCTTCATTAGCAGATTT 6350
Query 84314 ATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAA 84373
||||||||| ||||| | ||| | | |||| || || | ||||||||||| ||| |||
Sbjct 6349 ATTTTCTGTGGTTTCCCTGATCAAACAAGAGGTTACCAAGGAACCATGCATAGCACTGAA 6290
Query 84374 TAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTT 84433
||| | || |||| ||||||||| || || | ||||||||| || |||||||| |||||
Sbjct 6289 TAGGGAGCCGCCGATTACACCAGCTACACCTAGCATGTGAAATGGGTGCATAAGAATGTT 6230
Query 84434 ATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCC 84493
|| || |||||||| |||| |||| ||||||| || || || || || || ||||| ||
Sbjct 6229 GTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACC 6170
Query 84494 ATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAAC 84553
|||||| || ||||| || | || || | | ||| ||| || || ||||||||
Sbjct 6169 ATCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAACACTCGCAGCTGCAAC 6110
Query 84554 TGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCA 84613
||||| || || |||||| ||||| | |||||||| |||||| | |||||||||
Sbjct 6109 AGGAGCTGAATATGCAACAACCATCCAAGTTCGCATACCCAGACGAAAACTAAGTTCCCA 6050
Query 84614 TTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGG 84673
||||||||||||||| | | |||||| | |||||| | |||| |||| ||||||
Sbjct 6049 CTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGG 5990
Query 84674 TCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAG 84733
|||||||| |||| |||||| || | | || ||||||||| || || || ||||| |
Sbjct 5989 ACCACCATTGTATAACCATTCATCAACAGATGTTGCTTCCCATATTGGGTAAAAATGCAA 5930
Query 84734 ACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTA 84787
||| ||||| ||| |||| | || ||| |||| || |||||||| ||
Sbjct 5929 ACCTATAGCTGCAGAAATAGGAATAATGGTACCTAAAATAATATTGTTTCCATA 5876
>seq169634
Length=720
Score = 255 bits (282), Expect = 7e-63
Identities = 328/450 (73%), Gaps = 2/450 (0%)
Strand=Plus/Plus
Query 84480 CCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCA 84539
|| || ||||| |||||||| || ||||| || | || || | | ||| ||||||
Sbjct 2 CCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCA 61
Query 84540 GATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGA 84599
| ||| |||||||| | ||| || || |||||| ||||| || |||||||| |||||
Sbjct 62 GTTGCAGCTGCAACAGAAGCTGAATATGCAACAACAATCCAAGGTCGCATACCCAGACGG 121
Query 84600 TATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACA 84659
| ||||||||| ||||||||||||||| | | |||||| | |||||| | |||
Sbjct 122 AAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACA 181
Query 84660 ACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATA 84719
| |||| |||||| |||||||| |||| |||||| || | |||||||||||| ||
Sbjct 182 ATTAGTTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCTGCTTCCCATATT 241
Query 84720 GGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTG 84779
|| || ||||| | ||| ||||| ||| | |||| | | |||| ||||| || |||
Sbjct 242 GGGTAAAAATGCAAACCTATAGCTGCAGAAGTAGGAATAATGACACCTGAAATAATATTG 301
Query 84780 TTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGT 84839
||||| || | ||||| ||| || || ||||| ||||| |||||||| ||||| ||
Sbjct 302 TTTCCATAACTTAGAGATCCATAAACAGGTTCACGAATACCATCAATATCCACTGGAGGA 361
Query 84840 GCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAG 84898
||| ||| ||| || || || || ||||| ||| || | | || || || ||||| |
Sbjct 362 GCAGCAATGAAAGCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAA 420
Query 84899 AGTTCCAAACCAACCAACATAGATACGGTT 84928
| |||||||| |||| || | ||||||
Sbjct 421 AACACCAAACCATCCAATGTAAAGACGGTT 450
>seq300680
Length=3790
Score = 201 bits (222), Expect = 1e-46
Identities = 237/318 (75%), Gaps = 2/318 (1%)
Strand=Plus/Plus
Query 84186 AAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAG 84245
|| || | ||||||| |||||||| |||||||||||||| | || || || ||
Sbjct 354 AAATGTAAAGAACGAGAGTTGTTGAAACTAGCATACTGGAAGACCAATCGGCCAAAATAA 413
Query 84246 CCGTGAGCAGCAACAATATTATAAGTTTCCT-CTTCTTGACCGAACTTGTAACCATAGTT 84304
|| ||||| || || ||||||||||||| || ||||||||||||| |||||||| | ||
Sbjct 414 CCATGAGCGGCTACGATATTATAAGTTTTCTTCTTCTTGACCGAATTTGTAACCTTCATT 473
Query 84305 TTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCAT 84364
| |||||||| | ||||| | ||||| | ||| || || | |||||||||||
Sbjct 474 AGCAAATTCATTTTCTCTGGTTTC-CTGATTAAACTAGAGGTTACCAAGGAACCATGCAT 532
Query 84365 TGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCAT 84424
||| ||||| | | ||| ||||||||| || | | ||||||||| || |||||
Sbjct 533 AGCATTAAATAGGGAGCTGACGAGTACACCAGCTACGCTTAGCATGTGAAATGGGTGCAT 592
Query 84425 AAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAG 84484
||| ||||| || || ||||||| |||| |||| ||||||| || || || || || ||
Sbjct 593 AAGAATGTTGTGCTCAACCTGGAATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAG 652
Query 84485 TGGCATGCCATCAGAGAA 84502
||||| |||||||| ||
Sbjct 653 AGGCATACCATCAGAAAA 670
>seq250312
Length=8481
Score = 188 bits (208), Expect = 8e-43
Identities = 314/455 (69%), Gaps = 9/455 (2%)
Strand=Plus/Minus
Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044
||||| ||||| || |||| ||| | ||| |||||||||||||| |||| ||||
Sbjct 2019 GGGAAATTATGAGCATTACATTCATACATAACTTCCATACCAAGGTTAGCACAGTTAATG 1960
Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104
| ||| ||||| ||||| | ||| | ||| || ||||| | | |||| ||| ||
Sbjct 1959 ATATCAGCCCAAGTATTAATTACATGACATTGACTGTCGACTACAGATTGATGGAAACTA 1900
Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164
|| ||||| || || | ||||| ||||| | ||| | || |||||| ||
Sbjct 1899 AAACCATTTAGGTTGTAAGCCATAGTGCTGATACCTAACACAATAAACCAGATA------ 1846
Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224
||||||| ||| | ||| || || | | |||| |||||||| ||||| ||
Sbjct 1845 ---GGCCAAGTAGCTAGGAAGAAATGTAAAAAACGTGAGTTGTTGAAACTAGCATGTCGG 1789
Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284
||||| | ||||| || || || ||||| || |||||||| ||| |||| ||||||||
Sbjct 1788 AAGATCAATCGACCAAAATAACCATGAGCGGCTACAATATTCTAATTTTCTCCTTCTTGA 1729
Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344
||||| | ||||| | || | | |||| | ||| ||||| | ||| | | ||
Sbjct 1728 CCGAATATATAACCTTCATTAGCTTATTCATTCTTTGTGGTTTCCCTGATCAAACTAGGG 1669
Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404
|| || | |||||| |||| ||| |||||| | | || | ||||||||| || ||
Sbjct 1668 GTTACCAAGGAACCACGCATAGCACTGAATAGGGAGCTGCCAATTACACCAGCTACGCCT 1609
Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTC 84439
| ||||||||| | ||| |||| ||||| || ||
Sbjct 1608 AGCATGTGAAATGAGTGCCTAAGAATGTTGTGCTC 1574
>seq10884
Length=5042
Score = 134 bits (148), Expect = 2e-26
Identities = 119/149 (80%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 84354 GAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGA 84413
|||||||| || ||| |||||| | || |||||||||||||| || || | |||||||
Sbjct 3937 GAACCATGTATAGCAATGAATAGGGAGCCGCCGAATACACCAGCTACGCCTAGCATGTGA 3878
Query 84414 AAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCT 84473
|| || |||||||| ||||| || || |||||||| |||| |||| ||||||| || ||
Sbjct 3877 AATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCA 3818
Query 84474 GAGATACCAAGTGGCATGCCATCAGAGAA 84502
|| || || || ||||| |||||||| ||
Sbjct 3817 GAAATTCCTAGAGGCATACCATCAGAAAA 3789
>seq254652
Length=6058
Score = 132 bits (146), Expect = 5e-26
Identities = 203/288 (70%), Gaps = 1/288 (0%)
Strand=Plus/Minus
Query 84543 GCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATAT 84602
|| |||| || ||||| || || |||||| ||| | || |||| ||| ||||| |
Sbjct 956 GCAGCTGTAATAGGAGCTGAATATGCAACAACAATCAAAGGTCGCACACCCAGACGGAAA 897
Query 84603 GAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACA 84662
||||||||| || |||||||||||| | |||||| | |||||| | ||||
Sbjct 896 CTAAGTTCCCACTCGCGACCCATGTAACACGCTACACCAAGTAAGAAGTGTAGTACAATT 837
Query 84663 AGTTGATAAGGTCCACCATTATAT-AGCCATTCGTCCATACTTGCTGCTTCCCAAATAGG 84721
|||| |||||| |||||||| ||| | |||||| || | | || ||||||| | || |
Sbjct 836 AGTTCATAAGGACCACCATTGTATAAACCATTCATCAACAAATGTTGCTTCCTATATTAG 777
Query 84722 ATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTT 84781
|| ||||| | ||| |||| |||| | |||| || |||| ||||| || |||||
Sbjct 776 GTAAAAATGCAAACCTGTAGCTGTAGAAGTAGGAATAACAACACCTGAAATAATATTGTT 717
Query 84782 TCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATC 84829
||| || | ||||| | | || ||| | ||||| ||||||||
Sbjct 716 TCCATAAAGTAGAGATGTAAAAATAGGTTCATGAATACCATCAATATC 669
>seq8631
Length=609
Score = 123 bits (136), Expect = 3e-23
Identities = 119/150 (79%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 84349 CAAGTGAACCATGCATTGCAGAGAAT-AGAGCTCCACCGAATACACCAGCAACTCCCAAC 84407
|||| ||||||||||| ||| |||| || | || |||||||||||||| || | | |
Sbjct 182 CAAG-GAACCATGCATAGCACTGAATTAGGGAGCCGCCGAATACACCAGCTACGTCTAGC 240
Query 84408 ATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAAC 84467
|||||||| || |||||||| ||||| || || |||||||| |||| |||| |||||||
Sbjct 241 ATGTGAAATGGGTGCATAAGAATGTTGTGCTCGGCCTGGAATACAATCATGAAGTTGAAA 300
Query 84468 GTTCCTGAGATACCAAGTGGCATGCCATCA 84497
|| || || || || || ||||| ||||||
Sbjct 301 GTACCAGAAATTCCTAGAGGCATACCATCA 330
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 84576 ATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAAT 84635
||||| || |||||| | ||||| | ||||||||| ||||||||||||||| | |
Sbjct 343 ATCCAAGGGCGCATATCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCT 402
Query 84636 GCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCG 84695
|||||| | |||||| | |||| |||| |||||| |||||||| |||| ||||||
Sbjct 403 ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCATTCA 462
Query 84696 TCCATACTTGCTGCTTCCCAAATAGGATAGAAATG 84730
|| || |||||||||||| || || || |||||
Sbjct 463 TCAATGGATGCTGCTTCCCATATTGGGTAAAAATG 497
>seq36621
Length=13842
Score = 111 bits (122), Expect = 2e-19
Identities = 204/294 (69%), Gaps = 4/294 (1%)
Strand=Plus/Plus
Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044
||||| ||||| || |||||||| ||||| || | |||| |||| ||| | |||
Sbjct 7678 GGGAA-TTATGAGCATTACGTTCATGCATAACATTCATAACAAGGTTAGCATGGTTACTG 7736
Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAG-ACTCTGATTGAAGTT 84103
| ||| | || ||||| | |||||| | || ||||| || | | | | || | ||
Sbjct 7737 ATATCACCTCAAGTATTCATTACACGGCTGTGACTATCAACTACCAATTGGTTTCGATTT 7796
Query 84104 AAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAAC 84163
|| ||||| || || || ||||| ||||| ||||| |||| ||||| || ||||
Sbjct 7797 CAA-CCATTTAGGTTGAAAGCCATAATGCTAGTACCCAACGCAGTGAACCATATACCAAA 7855
Query 84164 CACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTG 84223
|| ||||||||||| | ||||| | | | || || | |||||| |||||| |
Sbjct 7856 AACAGGCCAAGCAGCTAGAAAAAAATATATAAAATGAGAGTCGTTGAAACTAGCATATTA 7915
Query 84224 GAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTC 84277
|||||| | | | | || || || |||||| || |||||||||||||| ||
Sbjct 7916 GAAGATCA-ATCAGCCAAATAACCATGAGCATATACGATATTATAAGTTTCTTC 7968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567960884366480
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