Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq25275 143 2e-29
seq284040 134 1e-26
seq62239 127 2e-24
seq259261 116 3e-21
seq156932 116 3e-21
seq228143 107 2e-18
seq118537 96.9 3e-15
seq268484 89.7 5e-13
seq276382 82.4 7e-11
>seq25275
Length=8276
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | ||||| || || || || || ||||| || | ||
Sbjct 5247 ATGCAGATCTTTGTGAAGACTTTGACCGGAAAGACCATCACACTGGAAGTTGAGAGCTCC 5306
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| |||||||| ||||| ||||| || || || ||
Sbjct 5307 GACACCATCGACAACGTGAAGGCGAAA-ATCCAAGATAAAGAGGGAATCCCACCAGACCA 5365
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | |||||||||||||| || ||||| |||||| | | | | |||| || ||
Sbjct 5366 ACAAAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCAGACTACAA 5425
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| |||||||| || || ||||||||| | |||||| | || ||
Sbjct 5426 CATTCAGAAGGAATCAACCCTTCACTTGGTGCTTCGATTGAGAGGTGG 5473
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | ||||| ||||| || ||||| || ||| | ||||| || | |
Sbjct 5019 ATGCAAATCTTTGTCAAAACCCTAACAGGGAAAACCATCACGTTGGAAGTCGAGAGCTCG 5078
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||||||||| || || || || || || ||
Sbjct 5079 GACACTATCGATAACGTGAAGGCGAAA-ATCCAAGACAAGGAGGGTATTCCCCCAGACCA 5137
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||||||| || ||||| ||||| | | || | ||||| ||
Sbjct 5138 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACTTTGGCCGATTACAA 5197
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || ||||| || || || ||||||||
Sbjct 5198 CATACAGAAGGAGTCCACCCTTCACTTGGT 5227
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| | ||||| || ||||| ||||| || ||||| || || ||| | |
Sbjct 4790 GATGCAAATCTTTGTCAAAACCCTCACCGGCAAAACCATCACGCTGGAGGTCGAAAGCTC 4849
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || |||| || | ||| || |||||||| ||||| || || || || |
Sbjct 4850 TGACACCATTGACAACGTGAAGGCTAAA-ATTCAAGACAAGGAAGGTATTCCCCCAGACC 4908
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | ||||||||||||| || ||||| ||||| | | | | || ||||
Sbjct 4909 AGCAGAGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGTACTCTTGCCGACTATA 4968
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912
|||| || ||||| || || || ||||||||
Sbjct 4969 ACATCCAGAAGGAGTCAACCCTTCACTTGGT 4999
Score = 104 bits (114), Expect = 2e-17
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || | ||||| || || || || ||||| || || | |
Sbjct 5474 GATGCAGATCTTTGTGAAGACATTGACCGGAAAGACCATCACTCTCGAGGTTGAGAGCTC 5533
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| ||||| || || || || || || || ||
Sbjct 5534 CGACACCATCGACAACGTGAAGGCTAAGATTCAAGATAAGGAGGGTATCCCACCAGACCA 5593
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
|| | |||||||||| || || ||||| |||||| ||| | | || | || ||
Sbjct 5594 GCAGAGGCTGATCTTTGCGGGTAAGCAGCTCGAGGATGGTCG-TACGCTTG-CTGACTAC 5651
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||| ||||||||||| || || ||||| | |||||| | || ||
Sbjct 5652 AACATTCAGAAGGAATCGACCCTTCATTTGGTTCTTCGATTGAGAGGTGG 5701
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||||| || ||||| || | ||||| || ||
Sbjct 5703 ATGCAGATCTTTGTGAAGACCTTAACCGGGAAGACTATCACATTGGAAGTCGAGAGTTCC 5762
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| |||| | |||||||| || || || || || || || || ||
Sbjct 5763 GACACCATTGACAACGTTAAAGC-GAAGATCCAGGATAAGGAGGGTATCCCACCAGACCA 5821
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || ||||| |||||| | | | | || |||||
Sbjct 5822 GCAGAGGCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGTACGCTTGCCGACTATAA 5881
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||||||||| || || ||||| | |||||| | || ||
Sbjct 5882 TATCCAGAAGGAATCGACTCTGCATTTGGTACTCCGATTGAGGGGTGG 5929
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| |||| || ||||| || || || || || || || || || |
Sbjct 4562 GATGCAGATCTTCGTTAAGACACTAACTGGAAAGACCATCACCCTAGAGGTCGAGAGTTC 4621
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||| ||| | || |||| || | ||| ||||| ||||| ||||| || || || ||||
Sbjct 4622 CGATACAATCGACAACGTCAAGGCCAAA-ATCCAGGACAAGGAAGGGATTCCCCCAGATC 4680
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| ||| | ||||||||||||| || ||||| ||||| ||| || | || || |
Sbjct 4681 AGCAAAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACTTTGGCCGACTACA 4740
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| || || ||||| || ||||| ||| | || | || | || |||||
Sbjct 4741 ATATCCAGAAGGAGTCCACACTCCACCTCGTCCTACGTCTCCGTGGAGG 4789
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| ||| | || || || || || ||||| || || || |
Sbjct 5930 GATGCAGATCTTTGTTAAGACGTTGACAGGGAAGACCATCACGCTGGAGGTGGAGAGTTC 5989
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| ||||| || ||||| || || || || || |||||
Sbjct 5990 GGACACGATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAGGGGATCCCACCGGATCA 6049
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||| ||||| ||||| ||||| |||||| || | | | ||||||||
Sbjct 6050 GCAGAGGCTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACTCTTGCGGATTATAA 6109
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || || ||||| | || | ||||| ||
Sbjct 6110 CATCCAGAAGGAGTCTACCCTTCATTTGGTTCTTCGTCTTCGCGGTGG 6157
>seq284040
Length=2693
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| |||||||| ||||| || || || || || || | ||
Sbjct 303 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACAATCACTCTGGAGGTCGAGAGCTCC 362
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| |||||||| |||||||||||
Sbjct 363 GATACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 422
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| ||||| || ||||||||||| |||| | | | || || |||
Sbjct 423 CAGCGCCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCGGACTACAAC 482
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||||||||| || || ||||| | || | ||||| ||
Sbjct 483 ATCCAGAAGGAATCGACTCTTCATCTGGTGCTACGGCTTCGCGGCGG 529
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| |||||||| || || || || || || || || | |
Sbjct 530 GATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTC 589
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||| || | || | || || |||||||| ||||| |||||||| ||||| |||||
Sbjct 590 CGATACGATCGATAACGTCAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCGGATCA 649
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| |||||||| ||||||||||| |||| | | | || || ||
Sbjct 650 GCAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCAGAACCCTAGCGGACTACAA 709
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| ||||| || ||| | || | || | ||||| ||
Sbjct 710 CATCCAGAAGGAGTCGACTCTCCACCTCGTTCTACGCCTCCGCGGCGG 757
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || ||| | ||||| ||||| || ||| | || || ||| | |
Sbjct 758 GATGCAGATCTTCGTGAAGACGTTGACCGGAAAAACGATCACGTTGGAGGTGGAAAGCTC 817
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| || ||||| |||||||| || || || ||
Sbjct 818 CGACACGATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAAGGAATCCCACCGGACCA 877
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||||||||||| ||||| || ||||| || || || | || | ||||| ||
Sbjct 878 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTCGAAGACGGAAGGACTTTGGCCGATTACAA 937
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || | || |||| |||| ||| | |||||
Sbjct 938 CATCCAGAAGGAGTCCACGTTGCATCTGGTTCTGCGGTTGAGGGGAGG 985
>seq62239
Length=9780
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| |||||||| ||||| || || || || || ||| || |
Sbjct 5558 GATGCAGATCTTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTCGAATCCTC 5499
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 5498 CGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCA 5439
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||| | ||||| |||||||| ||||| ||||| || | | | | || || ||
Sbjct 5438 GCAACGCCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCAGGACCCTAGCCGACTACAA 5379
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||| || ||||| || || || ||| | || | || | ||||| ||||
Sbjct 5378 CATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTCCGCGGCGGCG 5329
>seq259261
Length=7884
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| || || || || ||| | || || ||| || ||
Sbjct 2376 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTCGAATCCTCC 2435
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || || ||
Sbjct 2436 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAG 2495
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| |||||||||||||| ||||| || | | | | || || |||
Sbjct 2496 CAGCGCCTCATCTTCGCCGGGAAACAGCTCGAGGACGGCAGGACCCTAGCCGACTACAAC 2555
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||| ||||| | || | ||||| ||
Sbjct 2556 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCCGCGGTGG 2602
>seq156932
Length=6713
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || |||| || || || || || || || || ||||| || || |
Sbjct 4440 GATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGAGTTC 4381
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||| ||| | || | || || |||||||||||||| ||||| || ||||| |||||
Sbjct 4380 CGATACAATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCTCCAGATCA 4321
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| |||||||| ||||| ||| | | || || ||
Sbjct 4320 GCAGAGGCTGATCTTTGCCGGTAAACAGCTCGAGGACGGCCGAACTCTAGCCGACTACAA 4261
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| |||||||| || || || |||||||| | || | ||||| |||
Sbjct 4260 CATCCAAAAGGAGTCCACCCTCCACTTGGTCCTCCGTCTCCGCGGTGGC 4212
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || | ||||| || | |
Sbjct 3983 ATGCAGATTTTCGTCAAAACCCTCACTGGGAAGACGATCACTTTGGAAGTCGAGAGCTCG 3924
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| ||||| |||||||| |||||||| || || || |||
Sbjct 3923 GATACCATCGACAACGTGAAAGCCAAGATTCAAGACAAGGAAGGAATCCCACCAGACCAA 3864
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | ||||||||||| ||||||||||| ||| | | | | | ||||| |||
Sbjct 3863 CAAAGACTCATCTTTGCCGGAAAACAGCTGGAAGATGGGCGGACTCTTGCGGATTACAAC 3804
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||||||||| || || | ||| || | ||| | |||||
Sbjct 3803 ATCCAGAAGGAATCGACCCTGCATCTTGTGCTGAGGTTGAGGGGAGG 3757
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || | ||||| ||||| || || || ||||||||| | |
Sbjct 4211 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTCTTGAAGTAGAAAGCTCT 4152
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 4151 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 4092
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| ||||| ||||| || ||||| | | | | || || |||
Sbjct 4091 CAGCGATTGATCTTCGCCGGTAAACAACTCGAGGACGGCCGTACTCTTGCGGACTACAAC 4032
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||||||||
Sbjct 4031 ATCCAGAAGGAGTCAACCCTCCACTTGGT 4003
>seq228143
Length=6931
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| | ||||| || || || || | ||||| ||| | ||
Sbjct 2641 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATCACATTAGAAGTTGAAAGCTCC 2700
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||||||||| || ||||| || ||
Sbjct 2701 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCTCCAGACCAG 2760
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | || || ||||| || |||||||| || ||| | | | || || |||
Sbjct 2761 CAGAGACTTATTTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTTGCCGACTACAAC 2820
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| ||||| || ||||||||
Sbjct 2821 ATCCAGAAGGAGTCGACCCTTCACTTGGT 2849
Score = 107 bits (118), Expect = 2e-18
Identities = 152/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || |||| ||| | || || || || || || || || || ||| | |
Sbjct 3324 GATGCAGATATTCGTTAAGACGTTGACTGGAAAGACGATCACTCTGGAGGTGGAAAGCTC 3383
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || ||||||||||||||| || || || || || |||||
Sbjct 3384 GGATACGATTGATAATGTGAAGGCAAAGATCCAAGACAAGGAGGGGATCCCACCGGATCA 3443
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGA-GAAACATGTCAGATTATA 24881
|| | ||||||||||| ||||| ||| |||| ||| || || || || | |||||||
Sbjct 3444 GCAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAAGATGGGAGGACACTTG-CTGATTATA 3502
Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910
||||||| || || || || || || ||||
Sbjct 3503 ACATTCAGAAAGAGTCTACCCTGCATCTTG 3532
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || || || || || || ||||| || || |
Sbjct 2184 GATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACAATCACTCTCGAGGTTGAGAGTTC 2243
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 2244 CGACACAATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 2303
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | ||||||||||| || ||||| || ||| | | | | || || ||
Sbjct 2304 GCAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGTACTTTAGCCGACTACAA 2363
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || |||||||| || || || |||||
Sbjct 2364 CATCCAGAAGGAATCCACCCTCCATTTGGT 2393
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || ||||| || || | || || || | ||
Sbjct 2413 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAAACCATCACTTTGGAGGTCGAGAGCTCC 2472
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || || || || ||
Sbjct 2473 GACACCATCGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 2532
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||||||||| |||||||| ||||| ||| | | |||| || |||
Sbjct 2533 CAGAGACTCATCTTTGCCGGTAAACAGCTCGAGGACGGCCGAACCCTCGCAGACTACAAC 2592
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || |||||||| || || || |||||
Sbjct 2593 ATCCAGAAGGAATCCACCCTCCATTTGGT 2621
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || |||| || | ||||| || || || || | || || || |
Sbjct 2869 ATGCAGATTTTCGTTAAGACCTTGACCGGAAAGACCATCACTTTGGAGGTTGAGAGTTCA 2928
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||||||||| || ||||| || || || || |||
Sbjct 2929 GACACCATTGATAATGTGAAAGCTAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAA 2988
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| |||||||||||||| ||| ||| | | | || || |||
Sbjct 2989 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGCCGAACCCTTGCTGACTACAAC 3048
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| ||||| || || ||||
Sbjct 3049 ATCCAGAAGGAGTCGACCCTCCATCTGGT 3077
>seq118537
Length=769
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/195 (71%), Gaps = 1/195 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAA-CGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761
|||| ||||||| | |||| | |||| ||| || || || ||| | || || || ||
Sbjct 472 GATGTAGATCTTCTTGAAAAACCCTAATCGGCAAGACCATCACGTTGGAGGTCGAGTCCT 413
Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||||| || || | || ||| |||||||||||||| ||||| | || || || |
Sbjct 412 CCGACACCGTCGACAACGTGAAAGCCAAGATCCAAGACAAGGAAGGCTTCCCGCCGGACC 353
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| ||||| | | |||||||| |||||||| ||||| |||| | | | || || |
Sbjct 352 AGCAACGCCTCAACTTTGCCGAAAAACAGCTCGAGGACGGCAGAACCCTAGCCGACTACA 293
Query 24882 ACATTCAAAAGGAAT 24896
| || || |||||||
Sbjct 292 ATATCCAGAAGGAAT 278
>seq268484
Length=6331
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| |||||||| || | || ||| | || || || || |
Sbjct 1128 GATGCAGATCTTCGTGAAAACCCTAACCGGCAAGGCCATCACGTTGGAGGTCGAGTCCTC 1069
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || ||| |||||||||||||| ||||| || || | || ||
Sbjct 1068 CGACACCATCGACAACGTGAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGTCGGACCA 1009
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
| || | ||||| ||||| ||| |||| ||||| || | | | || || ||
Sbjct 1008 GTAGCGCCTCATCTTCGCCGGAAAATAGCTCGAGGACGGCGGACCCCTAGCCGACTACAA 949
Query 24883 CATTCAAAAGGAAT 24896
||| || |||||||
Sbjct 948 CATCCAGAAGGAAT 935
>seq276382
Length=2823
Score = 82.4 bits (90), Expect = 7e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || |||| ||| | || || || || || || || || || ||| | |
Sbjct 2148 GATGCAGATATTCGTTAAGACGTTGACTGGAAAGACGATCACTCTGGAGGTGGAAAGCTC 2207
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || ||||||||||| || || || || || | |||||
Sbjct 2208 GGATACGATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAGGGGATCCCACTGGATCA 2267
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGA-GAAACATGTCAGATTATA 24881
||| | ||||| ||| |||| ||| |||| ||| || || || || | |||||||
Sbjct 2268 ACAGAGGGTGATCGTTGTACGGAAGCAGTTGGAAGATGGGAGGATACTTG-CTGATTATA 2326
Query 24882 ACATTCAAAAGGAATCGAC 24900
||||||| ||||| || ||
Sbjct 2327 ACATTCAGAAGGAGTCCAC 2345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447288722549680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |