Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq205030 80.6 1e-10 >seq205030 Length=7310 Score = 80.6 bits (88), Expect = 1e-10 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | | ||||||||| | | |||| ||| ||||||||| ||||||||||||| Sbjct 6145 TTGCGGAGACAGTATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCGAAT 6204 Query 50171 TGCTCTACTCCG 50182 |||||||| ||| Sbjct 6205 TGCTCTACCCCG 6216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180602769082572