Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq303752 98.7 1e-15
>seq303752
Length=2320
Score = 98.7 bits (108), Expect = 1e-15
Identities = 169/243 (70%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 22052 GAAACGATGTATTGCGGATTCACGGGGCAACGTATCGAGAGCGA-GATCTTCATAGGACC 22110
|| |||||||| ||| |||||| | ||| | || |||| ||||||| | || ||
Sbjct 1635 GAGACGATGTACAACGGTCACACGGGCCGACGGCT-GACCGCGATGATCTTCCTTGGGCC 1577
Query 22111 CACATATTACCACAGACTCAAACATATGGTCAAGGACAAGATGCACGCCCGATCCCACGG 22170
||| || ||||| ||| | ||||||||||| | |||||||| || ||||| | ||
Sbjct 1576 CACGTACTACCAGAGATTGAAACATATGGTGGACGACAAGATACATTCCCGAGGACGGGG 1517
Query 22171 CCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGGGCGTGCTCAGGGCGGCGGGCTGCG 22230
|| ||| || || |||||||||| | || || ||| | ||| ||||| ||
Sbjct 1516 CCCGGTTCAGATCCTGACCCGGCAGCCGGCCGAGGGACGATCTCGAGACGGTGGGCTCCG 1457
Query 22231 GTTCGGAGAGATGGAGAAGGACTGCATTCTGGTGCACGGGGCAACACAGTTCTTGAACGA 22290
||||||||||||||| ||| ||||| | | ||||| || | || || | || ||
Sbjct 1456 GTTCGGAGAGATGGAACGGGATTGCATGATTGCCCACGGTGCCGCTCATTTTCTTAAGGA 1397
Query 22291 ACG 22293
|||
Sbjct 1396 ACG 1394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518521248336080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |