Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq62239 136 4e-27
seq259261 123 2e-23
seq284040 122 8e-23
seq228143 122 8e-23
seq25275 114 1e-20
seq156932 109 5e-19
seq243249 104 2e-17
seq277754 102 8e-17
seq268484 102 8e-17
seq118537 91.5 1e-13
seq13062 87.8 2e-12
>seq62239
Length=9780
Score = 136 bits (150), Expect = 4e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | | || ||||||||||||||| ||
Sbjct 5360 GGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCTGCCGTCCTCGAGCTGCTTCCC 5419
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| || |||||||| || ||||||||||||||||| |||||| |||
Sbjct 5420 GGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 5479
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| || || || || | ||| | |||||| ||||| || ||
Sbjct 5480 GACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTTTTCCCGGTTAGGGT 5539
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||| ||||||||
Sbjct 5540 TTTCACGAAGATCTGCAT 5557
>seq259261
Length=7884
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | | || |||||||||||| || ||
Sbjct 2573 GGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCTGCCGTCCTCGAGCTGTTTCCC 2514
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||||| || ||||||||||||||||| |||||| |||
Sbjct 2513 GGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTT 2454
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | |||||||| || || || || | |||| || || || || || ||
Sbjct 2453 CACGTTGTCGATCGTGTCGGAGGATTCGACCTCCAACGTGATCGTCTTCCCCGTTAGGGT 2394
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||| ||||||||
Sbjct 2393 TTTCACGAAGATCTGCAT 2376
>seq284040
Length=2693
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||||||| ||| || ||| ||||||||||||||
Sbjct 955 GTGGACTCCTTCTGGATGTTGTAATCGGCCAAAGTCCTTCCGTCTTCGAGCTGCTTGCCG 896
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || | ||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct 895 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATCTTCGCCTTC 836
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | |||||||| | ||||| || | |||| ||||| ||||||| ||
Sbjct 835 ACGTTATCGATCGTGTCGGAGCTTTCCACCTCCAACGTGATCGTTTTTCCGGTCAACGTC 776
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 775 TTCACGAAGATCTGCAT 759
Score = 120 bits (132), Expect = 3e-22
Identities = 120/156 (77%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||| |||||||| || ||| | ||||| |||||||| |||||||| || ||||||||
Sbjct 458 GTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGAATTCCTTCCTT 399
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | ||| |||| | ||| || || | ||||
Sbjct 398 GTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCGGAGCTCTCGACCTCCAGAGTGAT 339
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||||||| || ||||| ||||| ||||||||
Sbjct 338 TGTTTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 303
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| || | | || |||||| |||||||| ||
Sbjct 727 GTCGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTTCTGCCGTCCTCCAGCTGCTTCCCG 668
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| |||||||| || ||||| || ||||||||||| |||||| ||||
Sbjct 667 GCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTTG 608
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||| |||| | ||| || || | |||| ||| |||||||| || |||
Sbjct 607 ACGTTATCGATCGTATCGGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTTAGGGTT 548
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 547 TTGACGAAGATCTGCAT 531
>seq228143
Length=6931
Score = 122 bits (134), Expect = 8e-23
Identities = 153/208 (74%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512
|| || | ||| ||||| ||||| || ||||| ||| | | || || || || || |
Sbjct 2846 AAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCG--TCTTCCA 2789
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || ||| |||| || | ||||||||| |||||||||||||| ||||| ||
Sbjct 2788 GCTGCTTTCCGGCGAAAATAAGTCTCTGCTGGTCTGGAGGGATGCCTTCTTTGTCTTGGA 2729
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | |||| ||||||| | || || || | |||| ||| || |
Sbjct 2728 TCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACTTCTAATGTGATGGTCTTTC 2669
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||||| || |||||||||||
Sbjct 2668 CGGTCAAGGTTTTCACAAAAATCTGCAT 2641
Score = 118 bits (130), Expect = 1e-21
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512
||||| | |||||| || ||||| || ||||| || | | || || || |||||||
Sbjct 2618 AAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCGAGGGTTCGGCCG--TCCTCGA 2561
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||| || || || | ||||| | ||||||||| || ||||||||||||||||| ||
Sbjct 2560 GCTGTTTACCGGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGA 2501
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | || | ||||||| | ||| || || | |||| |||||| |
Sbjct 2500 TCTTGGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACCTCCAAAGTGATGGTTTTCC 2441
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || || ||||| ||||||||
Sbjct 2440 CAGTGAGGGTCTTGACGAAGATCTGCAT 2413
Score = 100 bits (110), Expect = 3e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||| || ||||| || ||||| ||| | | || | | | || |||||
Sbjct 2390 AAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTACGGCCA-TCTTCGAG 2332
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | ||||||| |||||||| || || |||||||||||||| |||
Sbjct 2331 CTGCTTTCCGGCAAAGATGAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGAT 2272
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||||| ||| || |||| |||| || || ||
Sbjct 2271 CTTGGCCTTGACGTTGTCGATTGTGTCGGAACTCTCAACCTCGAGAGTGATTGTCTTTCC 2212
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || ||||||||
Sbjct 2211 AGTGAGGGTCTTAACAAAGATCTGCAT 2185
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||| ||||| ||||| || |||||||| ||| ||| | || || | ||
Sbjct 3300 ATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAACGTACGCCCATCTTCCAATTG 3241
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
||| || || | || | || ||||||||| || |||||||||||||| || ||||||
Sbjct 3240 CTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTT 3181
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||| | | |||| ||||| | ||| || || | |||| ||| || || ||
Sbjct 3180 AGCCTTCACATTGTCAATGGTGTCCGAACTCTCGACCTCCAAAGTGATGGTCTTTCCAGT 3121
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || |||||||||||
Sbjct 3120 CAACGTCTTAACAAAAATCTGCAT 3097
>seq25275
Length=8276
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| |||||||| ||||||||| ||| ||| ||| |||||||||
Sbjct 5224 AAGTGAAGGGTGGACTCCTTCTGTATGTTGTAATCGGCCAAAGTGCGACC-GTCCTCGAG 5166
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | || | || ||||||||| || || || || |||||||| |||
Sbjct 5165 CTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGAT 5106
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||| | | || | ||||| | | ||| || || | |||| |||||| ||
Sbjct 5105 TTTCGCCTTCACGTTATCGATAGTGTCCGAGCTCTCGACTTCCAACGTGATGGTTTTCCC 5046
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| || || || |||||
Sbjct 5045 TGTTAGGGTTTTGACAAAGATTTGCAT 5019
Score = 105 bits (116), Expect = 6e-18
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| |||||||| ||| ||| || || || ||||||||||||||||
Sbjct 4759 GTGGACTCCTTCTGGATATTGTAGTCGGCCAAAGTTCGGCCG--TCCTCGAGCTGCTTGC 4702
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || |||| ||||| || || || || ||||||||||| ||| || ||
Sbjct 4701 CGGCAAAGATCAGCCTTTGCTGATCTGGGGGAATCCCTTCCTTGTCCTGGATTTTGGCCT 4642
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | || |||| ||| || || | ||||| ||| || || || || |
Sbjct 4641 TGACGTTGTCGATTGTATCGGAACTCTCGACCTCTAGGGTGATGGTCTTTCCAGTTAGTG 4582
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 4581 TCTTAACGAAGATCTGCAT 4563
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||| || || ||||| || ||||| || | | ||| ||| | ||||||||
Sbjct 5680 AAATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGCAAGCGTACGACCA-TCCTCGAG 5622
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| ||||| | || |||| ||||||||| || ||||| || ||||| || ||
Sbjct 5621 CTGCTTACCCGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTATCTTGAAT 5562
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | || | ||||||| | ||| || |||| |||| ||| || ||
Sbjct 5561 CTTAGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTTCC 5502
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || || ||||||||
Sbjct 5501 GGTCAATGTCTTCACAAAGATCTGCAT 5475
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | ||| ||||| ||||| || || || ||| | | || ||| ||||||||
Sbjct 4996 AAGTGAAGGGTTGACTCCTTCTGGATGTTATAGTCGGCAAGAGT--ACGGCCGTCCTCGA 4939
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || || | || || | ||||||||| || || || ||||||||||| |||
Sbjct 4938 GCTGCTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCT-TGA 4880
Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
||| || || | | |||| ||||| | | || || || | |||| |||||||
Sbjct 4879 ATTTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAGCGTGATGGTTTTG 4820
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || ||||| || || || |||||
Sbjct 4819 CCGGTGAGGGTTTTGACAAAGATTTGCAT 4791
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || || ||||| ||||| || ||| | | ||| | | | ||||| ||
Sbjct 5908 AAATGCAGAGTCGATTCCTTCTGGATATTATAGTCGGCAAGCGTACGGCCA-TCCTCAAG 5850
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | || |||| ||||||||| || ||||| || ||||| || |||
Sbjct 5849 CTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGGAT 5790
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
| || |||| | | | |||| ||||||| ||| || || | |||| || || |
Sbjct 5789 C-TTCGCTTTAACGTTGTCAATGGTGTCGGAACTCTCGACTTCCAATGTGATAGTCTTCC 5731
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| | || || || || ||||||||
Sbjct 5730 CGGTTAAGGTCTTCACAAAGATCTGCAT 5703
>seq156932
Length=6713
Score = 109 bits (120), Expect = 5e-19
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512
|| || | ||||||||| || || || ||||| ||| | | || || || |||||||
Sbjct 4234 AAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGGCCG--TCCTCGA 4291
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||| || || || | || |||| |||||| || ||||| || ||||||||||| ||
Sbjct 4292 GCTGTTTACCGGCAAAGATCAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCTTGGA 4351
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | |||| || |||| ||| || |||| |||| ||| ||||
Sbjct 4352 TCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGC 4411
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || || ||||| ||||||||
Sbjct 4412 CAGTGAGGGTCTTAACGAATATCTGCAT 4439
Score = 105 bits (116), Expect = 6e-18
Identities = 150/209 (72%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | ||| ||||| ||||| || ||||| || | | || ||| ||||||||
Sbjct 4006 AAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCAAGAGT--ACGGCCGTCCTCGA 4063
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
| || || || ||| | || | ||||||||||| || ||||||||||||||||| ||
Sbjct 4064 GTTGTTTACCGGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGA 4123
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | || | ||||| | | || || || | |||| ||||||||
Sbjct 4124 TCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCTACTTCAAGAGTGATGGTTTTGC 4183
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||||| || || ||||| || ||||||
Sbjct 4184 CGGTCAAGGTCTTGACGAAGATTTGCATG 4212
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| ||||||||||| | | || ||| | ||||| | |||||| ||
Sbjct 3559 GTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCA-TCCTCCAACTGCTTCCC 3617
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | || ||||||||| || || || |||||||| || |||||| |||
Sbjct 3618 TGCGAATATCAACCTCTGCTGGTCTGGTGGAATCCCTTCCTTATCCTGAATCTTTGCCTT 3677
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| || || | | |||||| || | ||||| || || ||||| | |||
Sbjct 3678 CACATTGTCAATGGTATCCGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCGGTTAAAGT 3737
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 3738 CTTGACGAAAATCTGCAT 3755
>seq243249
Length=1014
Score = 104 bits (114), Expect = 2e-17
Identities = 118/156 (76%), Gaps = 13/156 (8%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||||||||| || || ||| | |||||||| |||||||| || ||||||||||||||
Sbjct 797 GTCCTCGAGCTGTTTTCCGGCGAAGATGAGCCGTTGCTGGTCCGGCGGGATGCCTTCCTT 856
Query 133565 GTCGGTGATCTTTTGC-TTG-AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTG 133622
||||| |||| | ||| || || ||||||| || ||| || || | ||
Sbjct 857 GTCGG----CTTTCACGTTGTAGATG-------GTGTCGGAGGACTCAACCTCCAACGTT 905
Query 133623 ACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGC 133658
| ||| |||||||| |||||||| || || ||||||
Sbjct 906 ATGGTCTTGCCGGTTAGAGTTTTCACAAAGATCTGC 941
>seq277754
Length=2847
Score = 102 bits (112), Expect = 8e-17
Identities = 142/197 (72%), Gaps = 13/197 (7%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| || || || ||||| ||| | | || ||||||||| || || ||
Sbjct 2774 GTAGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTACCGTCCTCGAGTTGTTTTCCG 2715
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
||| | |||||||| |||||||| || ||||||||||||||||||| |||| | ||
Sbjct 2714 GCGAAGATGAGCCGTTGCTGGTCCGGTGGGATGCCTTCCTTGTCGG----CTTTCACGTT 2659
Query 133583 G-AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| || || ||||||| || ||| || || | || | ||| |||||||| || |
Sbjct 2658 GTAGATG-------GTGTCGGAGGACTCAACCTCCAGCGTTATGGTCTTGCCGGTTAGGG 2606
Query 133642 TTTTTACGAAAATCTGC 133658
|||| ||||| ||||||
Sbjct 2605 TTTTCACGAAGATCTGC 2589
>seq268484
Length=6331
Score = 102 bits (112), Expect = 8e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||||||||||| || || ||| | ||||| |||| |||||| | ||||||||||||||
Sbjct 972 GTCCTCGAGCTATTTTCCGGCGAAGATGAGGCGCTACTGGTCCGACGGGATGCCTTCCTT 1031
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| || | | || | ||||||| || ||| || || | ||||
Sbjct 1032 GTCTTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGGACTCGACCTCCAACGTGAT 1091
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || ||||| ||||| ||||||||
Sbjct 1092 GGCCTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 1127
>seq118537
Length=769
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/192 (71%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529
|| ||||| |||||||| ||| | | || |||||||||||| || | || |
Sbjct 280 TCCTTCTGGATATTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTTCGGCAAAG 339
Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589
|||| || |||||||| || |||| |||||||||||| |||||| || | |
Sbjct 340 TTGAGGCGTTGCTGGTCCGGCGGGAAGCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTG 399
Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT-AC 133648
|| || ||||||| || ||| || || | |||| ||| |||||| | || |||||| |
Sbjct 400 TCGACGGTGTCGGAGGACTCGACCTCCAACGTGATGGTCTTGCCGATTAGGGTTTTTCAA 459
Query 133649 GAAAATCTGCAT 133660
||| |||| |||
Sbjct 460 GAAGATCTACAT 471
>seq13062
Length=30343
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/197 (71%), Gaps = 13/197 (7%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| |||| || ||||| ||| | | || ||||||||||| || |
Sbjct 28583 GTGGACTCCTTCTAGATGTTGTAGTCGGCTAGGGTTTTGCCGTCCTCGAGCTATTTTTCG 28642
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
|| | ||||| || |||||||| ||||||||||||||||||| |||| | ||
Sbjct 28643 TCGAAGATGAGGCGTTGCTGGTCCAACGGGATGCCTTCCTTGTCGG----CTTTCACGTT 28698
Query 133583 G-AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| || || ||||||| || ||| || || | || | ||| |||||||| || |
Sbjct 28699 GTAGATG-------GTGTCGGAGGACTCAACCTCCAATGTTATGGTCTTGCCGGTTAGGG 28751
Query 133642 TTTTTACGAAAATCTGC 133658
|||||||||| ||||||
Sbjct 28752 TTTTTACGAAGATCTGC 28768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 480617527379440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |