Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq156932 152 1e-31
seq284040 150 4e-31
seq228143 131 4e-25
seq25275 125 2e-23
seq276382 111 4e-19
seq259261 109 1e-18
seq62239 107 5e-18
seq141081 87.8 4e-12
>seq156932
Length=6713
Score = 152 bits (168), Expect = 1e-31
Identities = 163/213 (77%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || ||||||||||||||||| || || || ||
Sbjct 3980 CAGATTTTCGTCAAAACCCTCACTGGGAAGACGATCACTTTGGAAGTCGAGAGCTCGGAT 3921
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||||| || ||||||||| || |||||||| || ||| ||
Sbjct 3920 ACCATCGACAACGTGAAAGCCAA-GATTCAAGACAAGGAAGGAATCCCACCAGACCAACA 3862
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||||| ||||| |||||||| ||| |||||||||| ||||| | || ||||||||| |
Sbjct 3861 AAGACTCATCTTTGCCGGAAAACAGCTGGAAGATGGGCGGACTCTTGCGGATTACAACAT 3802
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAG 206384
|||||| || || || || || ||||| ||||
Sbjct 3801 CCAGAAGGAATCGACCCTGCATCTTGTGCTGAG 3769
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || |||||||| ||||| ||||| || || ||
Sbjct 3752 CAGATTTTCGTCAAGACTTTAACCGGGAAGACGATCACCTTGGAGGTGGAGAGCTCGGAT 3693
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||||||| || || ||||| ||| || ||| ||
Sbjct 3692 ACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAAGGGATTCCACCAGACCAGCAG 3633
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || ||||| || ||||||||||| ||||| | ||| | || |||||||| ||
Sbjct 3632 AGGTTGATATTCGCAGGGAAGCAGTTGGAGGATGGTCGTACTCTTGCGGATTACAATATC 3573
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| |||||||||||||||
Sbjct 3572 CAGAAGGAGTCGACTCTTCACCTTGTT 3546
Score = 91.5 bits (100), Expect = 3e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || ||||| |||||| | ||||| ||||| |||||||| |||| || |||
Sbjct 4187 ACCGGCAAAACCATCACTCTTGAAGTAGAAAGCTCTGACACCATCGACAACGTCAAGGCC 4128
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| || || | ||||||||||| ||
Sbjct 4127 AAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAGCGATTGATCTTCGCCGGTAAA 4068
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| | || || || | ||| | || || |||||| ||||||| ||||| || || |||
Sbjct 4067 CAACTCGAGGACGGCCGTACTCTTGCGGACTACAACATCCAGAAGGAGTCAACCCTCCAC 4008
>seq284040
Length=2693
Score = 150 bits (166), Expect = 4e-31
Identities = 152/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||| | || |||||||||||||| ||||| |||||||| || ||||| ||||
Sbjct 774 AAGACGTTGACCGGAAAAACGATCACGTTGGAGGTGGAAAGCTCCGACACGATCGATAAC 833
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || |||||||| |||||| || | | ||||||
Sbjct 834 GTGAAGGCGAAGATTCAGGACAAGGAAGGAATCCCACCGGACCAGCAGCGTTTGATCTTC 893
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | ||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct 894 GCCGGCAAGCAGCTCGAAGACGGAAGGACTTTGGCCGATTACAACATCCAGAAGGAGTCC 953
Query 206365 ACTCTTCACCTTGTTTTG 206382
|| | || || ||| ||
Sbjct 954 ACGTTGCATCTGGTTCTG 971
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| || ||| | || || || ||||| ||| |||| ||||| || || ||
Sbjct 990 CAGATATTCGTGAAGACGTTGACCGGGAAGACGATTACTCTGGAGGTGGAGAGCTCCGAT 1049
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || ||||| || ||| |||||| ||
Sbjct 1050 ACGATCGATAATGTCAAGGCCAAGATTCAGGATAAAGAGGGGATTCCACCGGACCAGCAG 1109
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | || || |||||||||||| |||||||||| ||||| |||| ||||||||| ||
Sbjct 1110 AGGTTGATATTTGCCGGAAAGCAGCTGGAAGATGGCCGGACTCTGGCGGATTACAACATC 1169
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||||||
Sbjct 1170 CAGAAGGAGTCCACCCTGCACCTTGT 1195
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| || || || || || |||||| |||| || || || || ||
Sbjct 534 CAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCCGAT 593
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||||||| ||||| ||
Sbjct 594 ACGATCGATAACGTCAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAG 653
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| || || || || | || || |||||| ||
Sbjct 654 CGTCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCAGAACCCTAGCGGACTACAACATC 713
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| ||||| ||||| |||
Sbjct 714 CAGAAGGAGTCGACTCTCCACCTCGTT 740
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| || || || ||||| |||||| |||| || || || || ||
Sbjct 306 CAGATCTTCGTCAAAACCCTAACCGGCAAAACAATCACTCTGGAGGTCGAGAGCTCCGAT 365
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||||||| || || ||
Sbjct 366 ACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAGCAG 425
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||||||||||||| |||| || || || || | || || |||||| ||
Sbjct 426 CGCCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCGGACTACAACATC 485
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || |||||||| || ||
Sbjct 486 CAGAAGGAATCGACTCTTCATCTGGT 511
>seq228143
Length=6931
Score = 131 bits (144), Expect = 4e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| ||||| || |||||| | || || || ||||| |||
Sbjct 2188 CAGATCTTTGTTAAGACCCTCACTGGAAAGACAATCACTCTCGAGGTTGAGAGTTCCGAC 2247
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| ||||| ||||| || ||||| ||| || ||| |||
Sbjct 2248 ACAATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAGCAA 2307
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| || ||||| |||||||||||| | |||||||| | ||||| ||||| |||||| ||
Sbjct 2308 AGGCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGTACTTTAGCCGACTACAACATC 2367
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| || || || || ||
Sbjct 2368 CAGAAGGAATCCACCCTCCA 2387
Score = 129 bits (142), Expect = 1e-24
Identities = 149/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| | || ||||| || ||||| || ||||| ||||| || |||
Sbjct 2644 CAGATTTTTGTGAAAACCTTGACCGGAAAGACCATCACATTAGAAGTTGAAAGCTCCGAC 2703
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| |||||||| || || ||| ||
Sbjct 2704 ACCATTGACAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCTCCAGACCAGCAG 2763
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||| ||||||||||||||| ||||||| || | || | ||||| |||||| ||
Sbjct 2764 AGACTTATTTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTTGCCGACTACAACATC 2823
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || ||||||
Sbjct 2824 CAGAAGGAGTCGACCCTTCAC 2844
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || ||| | || ||||| || ||||||||||| || || ||||| |||
Sbjct 3100 CAGATTTTTGTTAAGACGTTGACTGGAAAGACCATCACTTTGGAGGTCGAGAGTTCGGAC 3159
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || ||||| || |||||| ||
Sbjct 3160 ACCATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAAGGCATCCCACCGGACCAGCAG 3219
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| || || ||||| ||||||||||| | || ||||| ||||||||| ||
Sbjct 3220 AGGTTGATCTTTGCTGGGAAGCAATTGGAAGATGGGCGTACGTTGGCTGATTACAACATC 3279
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || ||||| |||||
Sbjct 3280 CAGAAGGAGTCGACCCTTCATCTTGT 3305
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| || ||| | || ||||| ||||||||| |||| |||||||| || ||
Sbjct 3328 CAGATATTCGTTAAGACGTTGACTGGAAAGACGATCACTCTGGAGGTGGAAAGCTCGGAT 3387
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||| ||||| || || || || ||||| ||
Sbjct 3388 ACGATTGATAATGTGAAGGCAAAGATCCAAGACAAGGAGGGGATCCCACCGGATCAGCAG 3447
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| || || ||||||||||||||||| ||||| | || ||||| ||| |
Sbjct 3448 AGGTTGATCTTTGCAGGGAAGCAGTTGGAAGATGGGAGGACACTTGCTGATTATAACATT 3507
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||||||||| || || |||||
Sbjct 3508 CAGAAAGAGTCTACCCTGCATCTTGT 3533
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || ||||| ||||||||||| || || || || |||
Sbjct 2416 CAGATCTTCGTCAAGACCCTCACTGGGAAAACCATCACTTTGGAGGTCGAGAGCTCCGAC 2475
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || ||||| || || ||| ||
Sbjct 2476 ACCATCGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAG 2535
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||| ||||| ||||| || ||| | || || || | || | || || |||||| ||
Sbjct 2536 AGACTCATCTTTGCCGGTAAACAGCTCGAGGACGGCCGAACCCTCGCAGACTACAACATC 2595
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| || || || || ||
Sbjct 2596 CAGAAGGAATCCACCCTCCA 2615
Score = 89.7 bits (98), Expect = 1e-12
Identities = 133/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
|| ||||| || ||||||||||| || || ||||| ||||| | || || |||||
Sbjct 2893 ACCGGAAAGACCATCACTTTGGAGGTTGAGAGTTCAGACACCATTGATAATGTGAAAGC- 2951
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
||||| ||||| || ||||| || || ||| || || | ||||| || || ||
Sbjct 2952 TAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAACAGAGGTTGATCTTTGCTGGGAA 3011
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
||| |||||||||| | || | || || |||||| ||||||| ||||| || || ||
Sbjct 3012 ACAGCTGGAAGATGGCCGAACCCTTGCTGACTACAACATCCAGAAGGAGTCGACCCTCCA 3071
Query 206373 CCTTGT 206378
|| ||
Sbjct 3072 TCTGGT 3077
>seq25275
Length=8276
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| |||||| ||||| || ||||| ||||| |||| || ||||| ||||||
Sbjct 4794 CAAATCTTTGTCAAAACCCTCACCGGCAAAACCATCACGCTGGAGGTCGAAAGCTCTGAC 4853
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || |||||||| || ||||| ||| || ||| ||
Sbjct 4854 ACCATTGACAACGTGAAGGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAG 4913
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||| ||||| |||||||||||| | || || || | ||| | ||||| || ||| ||
Sbjct 4914 AGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGTACTCTTGCCGACTATAACATC 4973
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || |||||| | |||
Sbjct 4974 CAGAAGGAGTCAACCCTTCACTTGGTT 5000
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| |||||| || ||||| ||||| ||||| |||||||| || || || |||
Sbjct 5022 CAAATCTTTGTCAAAACCCTAACAGGGAAAACCATCACGTTGGAAGTCGAGAGCTCGGAC 5081
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || || ||||| || || || ||| || ||| ||
Sbjct 5082 ACTATCGATAACGTGAAGGCGAAAATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 5141
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| |||||| | || || || | |||||||||||||||||| |
Sbjct 5142 AGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACTTTGGCCGATTACAACATA 5201
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||| || |||||| | |||
Sbjct 5202 CAGAAGGAGTCCACCCTTCACTTGGTT 5228
Score = 113 bits (124), Expect = 1e-19
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || ||| | ||||| || || ||||| |||| ||||| ||||| |||
Sbjct 5934 CAGATCTTTGTTAAGACGTTGACAGGGAAGACCATCACGCTGGAGGTGGAGAGTTCGGAC 5993
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||||| || |||||| || || || || || ||||| ||
Sbjct 5994 ACGATCGACAATGTGAAAGCGAA-GATTCAGGACAAGGAGGGGATCCCACCGGATCAGCA 6052
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| || || || || || |||||| | || |||||||||||| | || ||||| ||| |
Sbjct 6053 GAGGCTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACTCTTGCGGATTATAACAT 6112
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||| |||||||| ||||| | ||| | | |||||
Sbjct 6113 CCAGAAGGAGTCTACCCTTCATTTGGTTCTTCGTCTTCG 6151
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||| | || || || ||||| || ||| ||||
Sbjct 4578 AAGACACTAACTGGAAAGACCATCACCCTAGAGGTCGAGAGTTCCGATACAATCGACAAC 4637
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || || || || || ||||| ||| || || ||||| || |||||
Sbjct 4638 GTCAAGGCCAAAATCCAGGACAAGGAAGGGATTCCCCCAGATCAGCAAAGGCTGATCTTT 4697
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | ||||||||||| ||||| ||||||| |||||
Sbjct 4698 GCCGGCAAGCAGCTCGAGGACGGCCGAACTTTGGCCGACTACAATATCCAGAAGGAGTCC 4757
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 4758 ACACTCCACCTCGT 4771
>seq276382
Length=2823
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || ||||| || ||||||||||| || || ||||| |||
Sbjct 1924 CAGATTTTTGTTAAGACTTTGACTGGAAAGACCATCACTTTGGAGGTTGAGAGTTCGGAC 1983
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| || || || ||| | ||| || || || ||||| || |||||| |
Sbjct 1984 ACCGTTGACAACGTGAAGGCTATGATCCAGGATAAGGAAGGCATCCCACCGGACTAGAAG 2043
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| | ||| ||||| ||||||||||| | || ||||| ||||||||| ||
Sbjct 2044 AGGTTGATCTTTGTCGGGAAGCAATTGGAAGATGGCCGTACGTTGGCTGATTACAACATC 2103
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| | ||||| |||||
Sbjct 2104 CAGAAGGAGTCGGCCCTTCATCTTGT 2129
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
|| ||||| ||||| |||||||| || || ||||| ||||| | || || ||||||
Sbjct 1717 ACCGGAAAGACGATAACTTTGGAGGTCGAGAGTTCAGACACCATTGACAATGTGAAAGCA 1776
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
|| ||| ||||| || || || || || ||| | || | || || ||||||||
Sbjct 1777 AA-GATCCAAGATAAGGAGGGCATCCCACCAGACCAATAGAGGTTGATATTTGCCGGAAA 1835
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
|||| | ||||||| | || | || || |||||| ||||||| ||||| || || ||
Sbjct 1836 GCAGCTTCAAGATGGCCGAACCCTTGCGGACTACAACATCCAGAAGGAGTCGACCCTCCA 1895
Query 206373 CCTTGTTTTGAGACTTCG 206390
|| || || | |||||
Sbjct 1896 TCTGGTATTCCGTCTTCG 1913
Score = 84.2 bits (92), Expect = 5e-11
Identities = 143/206 (69%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| || ||| | || ||||| ||||||||| |||| |||||||| || ||
Sbjct 2152 CAGATATTCGTTAAGACGTTGACTGGAAAGACGATCACTCTGGAGGTGGAAAGCTCGGAT 2211
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| || || || || | ||| ||
Sbjct 2212 ACGATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAGGGGATCCCACTGGATCAACAG 2271
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||| | | | ||||||||||||||||| |||| | || ||||| ||| |
Sbjct 2272 AGGGTGATCGTTGTACGGAAGCAGTTGGAAGATGGGAGGATACTTGCTGATTATAACATT 2331
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || || |||||
Sbjct 2332 CAGAAGGAGTCCAC-CTGCATCTTGT 2356
>seq259261
Length=7884
Score = 109 bits (120), Expect = 1e-18
Identities = 156/219 (71%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 206160 GGCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGT 206219
||| |||||| ||||| || ||||| || || || || |||||||| ||||| ||
Sbjct 2369 GGCGAAAATG---CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGT 2425
Query 206220 GGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTT 206279
||| || ||||| |||| || ||| ||||| || || || ||||| ||
Sbjct 2426 CGAATCCTCCGACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCC 2485
Query 206280 GCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGC 206339
||||||| || | || ||||||||||| || ||| | || || || ||||| | ||
Sbjct 2486 GCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAACAGCTCGAGGACGGCAGGACCCTAGC 2545
Query 206340 CGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378
||| |||||| ||||||| ||||| || || ||||| ||
Sbjct 2546 CGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGT 2584
>seq62239
Length=9780
Score = 107 bits (118), Expect = 5e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || ||||| || || | || || ||| || ||||| ||||
Sbjct 5542 AAAACCCTAACCGGGAAAACCATAACCCTAGAGGTCGAATCCTCCGACACCATCGACAAT 5483
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||| || ||||||| ||| | || ||||||
Sbjct 5482 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAGCAACGCCTCATCTTC 5423
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || ||||| | ||||| |||||| ||||||| |||||
Sbjct 5422 GCCGGGAAGCAGCTCGAGGACGGCAGGACCCTAGCCGACTACAACATCCAGAAGGAGTCC 5363
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 5362 ACCCTCCACCTCGT 5349
>seq141081
Length=4874
Score = 87.8 bits (96), Expect = 4e-12
Identities = 126/175 (72%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 206199 AAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATCAGTAAAGCAAAAGA 206257
||| || |||||||| || || ||||| || ||||| || || | || || || || ||
Sbjct 2190 AAAGACCATCACTTTAGAGGTCGAAAGCTCAGACACTGTTGACAACATGAAGGCCAA-GA 2132
Query 206258 TTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGT 206317
| ||||| |||||| | || | ||| || |||||||| || || |||| ||
Sbjct 2131 TCCAAGACAAAGAATGCATCCCTCTAGACCAGCAGAGACTTATTTTTGCTAGAAAACAAC 2072
Query 206318 TGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
||||||| || | || | || || |||||||||||||| ||||| ||||| ||
Sbjct 2071 TGGAAGACGGTCGAACCCTTGCTGACTACAACGTCCAGAAGGAGTCCACTCTCCA 2017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1174796298699426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |