Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq294625 100 2e-16
>seq294625
Length=4757
Score = 100 bits (110), Expect = 2e-16
Identities = 249/373 (67%), Gaps = 4/373 (1%)
Strand=Plus/Minus
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | || || || ||| || || || || || || || || || |
Sbjct 4447 AAGAGGTTCAAGTCGCCGAGGCTCGTGCTTTCTACGGATTCCAGATCGCAATCGAGAACA 4388
Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033
|||| || || |||||||| | || | || || |||||||| || |||| |||
Sbjct 4387 TTCACTCCGAGATGTACAGCTTGCTCCTCGAGACCTACATCAAGGACTCCAACGACAAGA 4328
Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCT-GCGATTAAACATAAAGCAGACTGGGCC 44092
| ||||| || | || || | ||| ||| | | | || || | |||||
Sbjct 4327 TGAGGCTGTTTCGCGCTGTGGAGACCATTCCTTGCGTCCAGA-AGAAGGCCAATTGGGCG 4269
Query 44093 CTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTG 44152
| | ||||| || || || |||| ||||| | | || || || ||
Sbjct 4268 ATGAGGTGGATCGATGGCTCGGAGTCGTTTGCGGAACGTATCATTGCCTTCGCTTGCGTC 4209
Query 44153 GAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTGGTTAAAGAAACGAGGTTT 44211
||||| || ||||| || ||| || |||| | || || ||||| |||||||| |||||
Sbjct 4208 GAAGGGATATTCTTCTCGGGAAGCTTCTGCG-CTATCTTCTGGTTGAAGAAACGCGGTTT 4150
Query 44212 GATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGA 44271
||||||||| ||||| || || || ||||| || || || ||||| ||||| |||||
Sbjct 4149 GATGCCTGGATTGACCTTCTCCAACGAGTTGATTTCACGAGACGAAGGATTACACTGCGA 4090
Query 44272 TTTTGCTTGCTTG 44284
||| || ||||||
Sbjct 4089 TTTCGCCTGCTTG 4077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395208841655530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |