Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq79434 93.3 2e-14
>seq79434
Length=11937
Score = 93.3 bits (102), Expect = 2e-14
Identities = 159/226 (70%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146
|| || |||||||| ||| |||| | | |||||||||||| || | | | ||
Sbjct 6384 CGAGTGCCAAACTGCCCACTTGGGTACAGAAGATTAATATTGTTGCTGCCGACATAGTTT 6443
Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206
|||||||| || || |||| | | ||| || || |||||||| |||||||
Sbjct 6444 TGAGCCATGCCAATGATTGTAGTTACAAGACTTTGCTCCCCATGATGATAAGCTGAATGC 6503
Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAAT--TCTTTTTAA 65264
|| || ||||| |||||||| ||||||||||||| |||| || |||| ||| || |
Sbjct 6504 TCCGACACATACCCACTAAACTGAGCAACTTTTACTTCC--TGGAAAATGGGCTTCTTGA 6561
Query 65265 ATGCAGAATACAATAT-TTTCCGTAAACTAATTTTCAATCCATCCA 65309
| ||| || |||| || |||| | || ||||||||||||||
Sbjct 6562 AAGCACAAAACAAAATCTTTCTCTGCCCT-GGTTTCAATCCATCCA 6606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 234347499600900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |