Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq25275 123 2e-23 seq228143 120 2e-22 seq276382 118 7e-22 seq156932 111 1e-19 seq284040 107 1e-18 seq259261 91.5 9e-14 >seq25275 Length=8276 Score = 123 bits (136), Expect = 2e-23 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG-- 34537 |||||||| | ||| | ||||| || || ||| |||||| || ||||| ||||| | Sbjct 5245 CCGCCTCTTAAACGAAGAACCAAGTGAAGGGTGGACTCCTTCTGTATGTTGTAATCGGCC 5186 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 |||||| || |||| || || || || |||||||| || || | ||| ||||| || | Sbjct 5185 AAAGTG--CGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGG 5128 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCC 34656 | | |||||||||||| ||| ||| | || ||| || || ||||| |||||| Sbjct 5127 GAATACCCTCCTTGTCTTGGAT-TTTCGCCTTCACGTTATCGATAGTGTCCGAGCTCTCG 5069 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| || || ||||| || |||| ||||| ||||| || ||||| Sbjct 5068 ACTTCCAACGTGATGGTTTTCCCTGTTAGGGTTTTGACAAAGATTTGCAT 5019 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||||| || || |||||| || ||||||||||| | | Sbjct 6157 CCACCGCGAAGACGAAGAACCAAATGAAGGGTAGACTCCTTCTGGATGTTATAATCCGCA 6098 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | || ||||| || || || ||||| || | | ||| || ||||| || Sbjct 6097 AGAGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTGGG 6038 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | ||| || | || ||||| |||||||| Sbjct 6037 ATCCCCTCCTTGTC-CTGAATCTTCGCTTTCACATTGTCGATCGTGTCCGAACTCTCCAC 5979 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || || || ||||| || ||||| |||||||| Sbjct 5978 CTCCAGCGTGATGGTCTTCCCTGTCAACGTCTTAACAAAGATCTGCAT 5931 >seq228143 Length=6931 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||| |||||| || |||||| || ||||| || || | | Sbjct 3095 CCACCACGAAGACGGAGGACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 3036 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | ||||| || ||||| || ||||| || || | ||||||||| || || Sbjct 3035 AGGGTTCGGCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGG 2976 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| |||||| | ||| || || ||| |||||| ||||| || Sbjct 2975 ATGCCTTCCTTATCTTGGATCTTA-GCTTTCACATTATCAATGGTGTCTGAACTCTCAAC 2917 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || ||||| || || || || ||||||||||| Sbjct 2916 CTCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTAACGAAAATCTGCAT 2869 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||||| ||| ||||| || ||||| || |||| || ||||| Sbjct 2630 AGACGTAGGACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCGAGGGTTCGG 2571 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || |||||||||||||| || | | ||| ||||| || || | || ||| Sbjct 2570 CCGTCCTCGAGCTGTTTACCGGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCTTCC 2511 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| || || ||||| |||||| || |||| || Sbjct 2510 TTGTCTTGGATC-TTGGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACCTCCAAAGT 2452 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || | || || || || |||||||| Sbjct 2451 GATGGTTTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 2413 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | ||| || || ||| || |||||||||||||| | |||||| | | Sbjct 3542 AGACGAAGCACAAGATGCAGGGTAGACTCTTTCTGAATGTTATAATCAGCAAGTGTCCTC 3483 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || || || ||||| || || | ||| || ||||| || | |||||| Sbjct 3482 CCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCCTCC 3423 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| |||| || || || ||| || || ||| ||||| |||| || Sbjct 3422 TTGTCTTGGATC-TTTGCCTTCACATTATCAATCGTATCCGAGCTTTCCACCTCCAGAGT 3364 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || ||||| || || || |||||||| Sbjct 3363 GATCGTCTTTCCAGTCAACGTCTTAACGAATATCTGCAT 3325 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| || || || |||||| || ||||| || || | | Sbjct 2867 CCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 2808 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| ||||||| || || || ||||| || || | | ||| ||||| || || Sbjct 2807 AGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAAATAAGTCTCTGCTGGTCTGGAGGG 2748 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||||| | || ||| | ||| ||||| ||| || || Sbjct 2747 ATGCCTTCTTTGTCTTGGATCTTG-GCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAAC 2689 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || ||||| || |||||||||||||||||||| Sbjct 2688 TTCTAATGTGATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 2641 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || || | ||| | ||| || || |||||| || ||||| ||||| | Sbjct 3323 CCTCCCCTTAGCCGAAGCACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 3264 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || ||| | ||||| | ||| || || ||||| || || | ||| |||||||| || Sbjct 3263 AACGTACGCCCATCTTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3204 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||| || |||||| | || || | ||| ||||| ||||| || Sbjct 3203 ATGCCTTCCTTATCCTGGATCTTA-GCCTTCACATTGTCAATGGTGTCCGAACTCTCGAC 3145 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || || || ||||| || |||||||||||||| Sbjct 3144 CTCCAAAGTGATGGTCTTTCCAGTCAACGTCTTAACAAAAATCTGCAT 3097 >seq276382 Length=2823 Score = 118 bits (130), Expect = 7e-22 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| || |||| |||||| || |||||| || ||||| || || | | Sbjct 1919 CCACCACGAAGACGGAATACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 1860 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | |||| ||| || || ||||||||||| || | || |||||| || || Sbjct 1859 AGGGTTCGGCCATCTTGAAGCTGCTTTCCGGCAAATATCAACCTCTATTGGTCTGGTGGG 1800 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||| ||| |||| |||| ||| || | ||| |||||| ||||| || Sbjct 1799 ATGCCCTCCTTATCTTGGATC-TTTGCTTTCACATTGTCAATGGTGTCTGAACTCTCGAC 1741 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAA 34685 |||| |||||||| || ||||| || Sbjct 1740 CTCCAAAGTTATCGTCTTTCCGGTCAA 1714 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | ||| || ||| |||||| |||||||||||||| | |||| | | | Sbjct 2365 AGACGAAGCACAAGATGCAG-GTGGACTCCTTCTGAATGTTATAATCAGCAAGTATCCTC 2307 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || || | ||| || | | |||||| ||| | || | |||||| Sbjct 2306 CCATCTTCCAACTGCTTCCGTACAACGATCACCCTCTGTTGATCCAGTGGGATCCCCTCC 2247 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| |||| || | || || || ||| || || ||| ||||| |||| || Sbjct 2246 TTATCTTGGATC-TTAGCCTTCACATTATCAATCGTATCCGAGCTTTCCACCTCCAGAGT 2188 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || ||||| || || || |||||||| Sbjct 2187 GATCGTCTTTCCAGTCAACGTCTTAACGAATATCTGCAT 2149 >seq156932 Length=6713 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| || |||||| || ||||| || || | ||| || || Sbjct 3994 AGACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTACGG 4053 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || |||||||||||||| || || || ||||| ||||| || || | || ||| Sbjct 4054 CCGTCCTCGAGTTGTTTACCGGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCTTCC 4113 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| | || ||||| ||| || ||||| | || Sbjct 4114 TTGTCTTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCTACTTCAAGAGT 4172 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| || || || || || || |||||| Sbjct 4173 GATGGTTTTGCCGGTCAAGGTCTTGACGAAGATTTGCATG 4212 Score = 105 bits (116), Expect = 4e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || ||||| ||||| | ||| || ||| | ||||| || ||||| |||||||| Sbjct 3793 TCCTTCTGGATGTTGTAATCCGCAAGAGTCCGCCCATCTTCCAGCTGTTTTCCGGCAAAG 3852 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | |||||||| || || | ||| ||||||||| ||||| | ||| ||| | Sbjct 3853 ATGAGTCTTTGTTGGTCTGGTGGGATTCCTTCCTTGTCTTGAATCTTG-GCTTTCACGTT 3911 Query 34636 AAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 || || || |||||| ||||||| || ||||| || || || | ||||| || Sbjct 3912 GTCGATGGTATCCGAGCTCTCGACTTCCAAAGTGATCGTCTTCCCAGTGAGGGTTTTGAC 3971 Query 34695 AAAAATCTGCAT 34706 ||||||||||| Sbjct 3972 GAAAATCTGCAT 3983 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| ||| ||||||||| ||||| || || | || ||||| Sbjct 4222 AGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCGG 4281 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || |||||||||||||| || | | ||| || || || || | || ||| Sbjct 4282 CCGTCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGATCTGGAGGAATCCCTTCC 4341 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || ||| | |||||| || ||||| || || | || Sbjct 4342 TTGTCTTGGATC-TTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCGACCTCGAGAGT 4400 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | || || || || |||||||| Sbjct 4401 GATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 4439 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || ||||| |||||| || || || ||||| | ||| || || | || || | || Sbjct 3553 TGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCATCCTCCAACTGC 3612 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || ||||| || | ||| ||||| || || | || ||||| || |||||| Sbjct 3613 TTCCCTGCGAATATCAACCTCTGCTGGTCTGGTGGAATCCCTTCCTTATCCTGAATCTTT 3672 Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || || | ||| || || ||||||||| |||| ||| ||||| || ||||| Sbjct 3673 -GCCTTCACATTGTCAATGGTATCCGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCGGT 3731 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 ||| || || || ||||||||||| Sbjct 3732 TAAAGTCTTGACGAAAATCTGCAT 3755 >seq284040 Length=2693 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 || || || | |||||| | ||| | || || ||| |||||| || ||||| ||||| Sbjct 1216 TCACCACCACGAAGACGAAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCC 1157 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 | || || || | ||||| || || || ||||||||||| || | ||| |||||||| Sbjct 1156 GCCAGAGTCCGGCCATCTTCCAGCTGCTTTCCGGCAAATATCAACCTCTGCTGGTCCGGT 1097 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTC 34655 || | ||||| || || ||| || | || || || || || || |||||| Sbjct 1096 GGAATCCCCTCTTTATC-CTGAATCTTGGCCTTGACATTATCGATCGTATCGGAGCTCTC 1038 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| |||| || ||||| || ||||| ||||| ||||| || |||||||| Sbjct 1037 CACCTCCAGAGTAATCGTCTTCCCGGTCAACGTCTTCACGAATATCTGCAT 987 >seq259261 Length=7884 Score = 91.5 bits (100), Expect = 9e-14 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||||| ||||| ||| |||||| || ||||| || || | || || | Sbjct 2593 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCTG 2534 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || ||||| ||||| || || | ||||| ||||||||||| | || ||| Sbjct 2533 CCGTCCTCGAGCTGTTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCC 2474 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | || ||||| | || || |||| || Sbjct 2473 TTGTCCTGGATC-TTGGCCTTCACGTTGTCGATCGTGTCGGAGGATTCGACCTCCAACGT 2415 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 ||||| || || |||| |||||||| || |||||||| || Sbjct 2414 GATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 312950164674098