Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq25275 89.7 4e-13
>seq25275
Length=8276
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| ||||| || || |||||| || || | || ||||| ||| |
Sbjct 5019 ATGCAAATCTTTGTCAAAACCCTAACAGGGAAAACCATCACGTTGGAAGTCGAGAGCTCG 5078
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | | | || || ||||| ||||| || ||| |||| || |||
Sbjct 5079 GACACTATCGATAACGTGAAGGCGAAAATCCAAGACAAGGAGGGTATTCCCCCAGACCAG 5138
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
|| |||| || |||||||| || || | || |||| |||| ||| |||||||||||
Sbjct 5139 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACTTTGGCCGATTACAAC 5198
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| || || ||| ||| | || |||||| | ||||| | |||||
Sbjct 5199 ATACAGAAGGAGTCCACCCTTCACTTGGTTCTTCGTTTAAGAGGCGG 5245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 353850405812862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |