Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq284040 156 3e-33
seq259261 156 3e-33
seq25275 129 4e-25
seq62239 125 5e-24
seq156932 123 2e-23
seq268484 114 9e-21
seq228143 111 1e-19
seq276382 82.4 5e-11
>seq284040
Length=2693
Score = 156 bits (172), Expect = 3e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || |||| | || ||||| || | |||| |||||| ||||||||||||||
Sbjct 989 CATCCCTCCCCTCAACCGCAGAACCAGATGCAACGTGGACTCCTTCTGGATGTTGTAATC 930
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| | | |||| || |||||||| ||||| ||||||||||||||||| || |
Sbjct 929 GGCCAAAGTCCTTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCCGG 870
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| |||||| ||||| | | || ||||||| | |||
Sbjct 869 TGGGATTCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTATCGATCGTGTCGGAGCTTTC 810
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| ||| ||||| ||||| || | |||||||||||||| |||||
Sbjct 809 CACCTCCAACGTGATCGTTTTTCCGGTCAACGTCTTCACGAAGATCTGCAT 759
Score = 127 bits (140), Expect = 1e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186
|| ||||| || || |||||| ||||||||||| || || || || || |||| |
Sbjct 739 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCTAG--GGTTCTGCCGTCCT 682
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
|||||||||||||||| ||||| | |||||||||||| | ||| | |||||||| |||
Sbjct 681 CCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCT 622
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| | | | || || |||| | || ||||||| || || ||||
Sbjct 621 GGATCTTCGCCTTGACGTTATCGATCGTATCGGAGCTCTCGACCTCCAGAGTGATGGTCT 562
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || ||||| || |||||||| |||||
Sbjct 561 TGCCGGTTAGGGTTTTGACGAAGATCTGCAT 531
Score = 118 bits (130), Expect = 8e-22
Identities = 157/214 (73%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185
|||||| ||||| || ||||| ||||||||||| || || || || || ||||
Sbjct 512 CACCAGATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGCTAG--GGTTCTGCCGTCC 455
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
||||||||||| ||||| ||||| | ||||||||||| | ||| | |||||||| |||
Sbjct 454 TCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGAATTCCTTCCTTGTCC 395
Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
|||||| ||| || ||| | || || |||| | || ||||||| || || |
Sbjct 394 TGGATCTTCGCCTTGACATTGT--CGATCGTATCGGAGCTCTCGACCTCCAGAGTGATTG 337
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || || ||||| || |||||||| |||||
Sbjct 336 TTTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 303
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||| |||||| |||||||||||||| || || || | || ||
Sbjct 1196 CACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGAGTCCGGCCATCTTC 1137
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| |||||||| ||||| | |||||| || | || | || || || |||
Sbjct 1136 CAGCTGCTTTCCGGCAAATATCAACCTCTGCTGGTCCGGTGGAATCCCCTCTTTATCCTG 1077
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || || |||| | |||||||||| |||||||||||
Sbjct 1076 AATCTTGGCCTTGACATTATCGATCGTATCGGAGCTCTCCACCTCCAGAGTAATCGTCTT 1017
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||||||||| || |||||
Sbjct 1016 CCCGGTCAACGTCTTCACGAATATCTGCAT 987
>seq259261
Length=7884
Score = 156 bits (172), Expect = 3e-33
Identities = 163/212 (77%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185
||||||||| || ||| |||||| ||||||||||| ||||| || || || ||||
Sbjct 2585 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAG--GGTCCTGCCGTCC 2528
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|| ||||| |||||||| ||||| | |||||||| || | || | |||||||| |||
Sbjct 2527 TCGAGCTGTTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCC 2468
Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||||| | | || ||||||| |||||| ||||||| ||| ||||||
Sbjct 2467 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGGATTCGACCTCCAACGTGATCGTC 2408
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||||||||| |||||
Sbjct 2407 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 2376
>seq25275
Length=8276
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| |||||||| || ||||| || || |||| ||
Sbjct 4999 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTATAGTCGGCAAGAGTACGGCCGTCCTCG 4940
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||| | |||||| |||| || | ||||||||| ||
Sbjct 4939 AGCTGCTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGA 4880
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|| || ||||| | | |||||||| | | ||| ||||||| ||| || || ||
Sbjct 4879 ATTTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAGCGTGATGGTTTTG 4820
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| || || |||||||||||
Sbjct 4819 CCGGTGAGGGTTTTGACAAAGATTTGCAT 4791
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| ||| |||||| || |||||||||||||| | ||| |||| ||
Sbjct 5227 ACCAAGTGAAGGGTGGACTCCTTCTGTATGTTGTAATCGGCCAAAGTGCGACCGTCCTCG 5168
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| |||||||||||||| | |||||| |||| || | ||| ||||| ||
Sbjct 5167 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 5108
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|| ||| ||||| | | || ||||| | | || || |||| ||| || || ||
Sbjct 5107 ATTTTCGCCTTCACGTTATCGATAGTGTCCGAGCTCTCGACTTCCAACGTGATGGTTTTC 5048
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| || || |||||||||||
Sbjct 5047 CCTGTTAGGGTTTTGACAAAGATTTGCAT 5019
Score = 105 bits (116), Expect = 5e-18
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGT 44186
|| ||||| || ||| |||||| ||||| ||||| ||||| | ||| | || |||| |
Sbjct 4771 ACGAGGTGGAGTGTGGACTCCTTCTGGATATTGTAGTCGGCCAAAGTTCG-GC-CGTCCT 4714
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| |||||||| ||||||||||||| | |||||||||| || | |||||||| |||
Sbjct 4713 CGAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGATCTGGGGGAATCCCTTCCTTGTCCT 4654
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|| || ||| | | | || || |||| || ||||| | || || ||||
Sbjct 4653 GGATTTTGGCCTTGACGTTGTCGATTGTATCGGAACTCTCGACCTCTAGGGTGATGGTCT 4594
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || ||||| |||||||| |||||
Sbjct 4593 TTCCAGTTAGTGTCTTAACGAAGATCTGCAT 4563
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| || | ||||| |||||| || ||||| || |||||||| ||
Sbjct 5477 CATCCCACCTCTCAATCGAAGCACCAAGTGAAGGGTTGATTCCTTCTGAATGTTGTAGTC 5418
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || |||||||| |||||||||||||| | || || ||||
Sbjct 5417 TGCAAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTTTGTTGGTCTGG 5358
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || || || || || ||| ||||| | | |||||||||| | ||
Sbjct 5357 TGGGATTCCCTCTTTATCTTGGATTTTCGCCTTCACGTTGTCGATGGTGTCGGAGCTCTC 5298
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| || || |||||||| || | |||||||| ||||| |||||
Sbjct 5297 AACTTCCAGTGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAGATCTGCAT 5247
Score = 95.1 bits (104), Expect = 9e-15
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| || |||||| |||||||| ||||| || || | | || ||
Sbjct 6139 ACCAAATGAAGGGTAGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCCTCA 6080
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||||||||| ||||| |||| | ||||||||| | || | || ||||| |||
Sbjct 6079 AGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGA 6020
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| |||| || ||| | || ||||| | |||||||||| ||| || |||
Sbjct 6019 ATCTTC-GCTTTCACATTGT--CGATCGTGTCCGAACTCTCCACCTCCAGCGTGATGGTC 5963
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | ||||| || ||||| |||||
Sbjct 5962 TTCCCTGTCAACGTCTTAACAAAGATCTGCAT 5931
>seq62239
Length=9780
Score = 125 bits (138), Expect = 5e-24
Identities = 158/213 (74%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186
|| ||||| || ||| |||||| ||||||||||| ||||| || || || |||| |
Sbjct 5349 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTAG--GGTCCTGCCGTCCT 5406
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| |||||||||||||| ||||| | || ||||| || | || | |||||||| ||
Sbjct 5407 CGAGCTGCTTCCCGGCGAAGATGAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTT 5466
Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||| || ||| | |||||||||| |||||| ||||| | || || ||
Sbjct 5467 GGATCTTGGCCTTGACATTGT--CGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGT 5524
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| ||||||||||| |||||
Sbjct 5525 TTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 5557
>seq156932
Length=6713
Score = 123 bits (136), Expect = 2e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|||| ||| || ||| |||||||||||||||||| ||||| ||||| || |||| |
Sbjct 4231 ACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTT--CGGCCGTCCT 4288
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| ||||| || ||||||||||||| | ||||||||||| ||| | |||||||| ||
Sbjct 4289 CGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCTT 4348
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | || || |||| || ||||| | || || ||||
Sbjct 4349 GGATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCT 4408
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||||||||| ||||| || |||||
Sbjct 4409 TGCCAGTGAGGGTCTTAACGAATATCTGCAT 4439
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || |||| |||| ||| || || || || ||||| ||||||||||||||
Sbjct 3753 CATCCCTCCCCTCAACCTCAGCACAAGATGCAGGGTCGATTCCTTCTGGATGTTGTAATC 3812
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || |||||||| || ||||||||||| | | || || ||||
Sbjct 3813 CGCAAGAGTCCGCCCATCTTCCAGCTGTTTTCCGGCAAAGATGAGTCTTTGTTGGTCTGG 3872
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | |||||||| || ||||| |||| | ||| | ||||| || | | |
Sbjct 3873 TGGGATTCCTTCCTTGTCTTGAATCTT-GGCTTTCACGTTGTCGATGGTATCCGAGCTCT 3931
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||| || |||||||| || |||||||| || ||||| || |||||
Sbjct 3932 CGACTTCCAAAGTGATCGTCTTCCCAGTGAGGGTTTTGACGAAAATCTGCAT 3983
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||| ||||||||||| || || || || |||| ||
Sbjct 4003 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTACGGCCGTCCTCG 4062
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| || || ||||| |||||||| |||||||| |||| || | |||||||| ||
Sbjct 4063 AGTTGTTTACCGGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 4122
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | | ||| || || | || || || ||
Sbjct 4123 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCTACTTCAAGAGTGATGGTTTTG 4182
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || | |||||| |||||||||||||||
Sbjct 4183 CCGGTCAAGGTCTTGACGAAGATTTGCATG 4212
>seq268484
Length=6331
Score = 114 bits (126), Expect = 9e-21
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| ||||||||||| ||||| || | | |||| || |||| || ||||| |||
Sbjct 937 TCCTTCTGGATGTTGTAGTCGGCTAGGGGTCCGCCGTCCTCGAGCTATTTTCCGGCGAAG 996
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|| | |||| ||| || || || | |||||||| || ||||| |||| | |||
Sbjct 997 ATGAGGCGCTACTGGTCCGACGGGATGCCTTCCTTGTCTTGGATCTT-GGCTTTCACGTT 1055
Query 44267 -CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||||| ||| || ||||||| ||| || | ||| || || ||||| |||||
Sbjct 1056 GTCGATGGTGTCGGAGGACTCGACCTCCAACGTGATGGCCTTGCCGGTTAGGGTTTTCAC 1115
Query 44326 GAAGATTTGCAT 44337
|||||| |||||
Sbjct 1116 GAAGATCTGCAT 1127
>seq228143
Length=6931
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| || || ||| ||||| ||||||||||| || ||||| || |||| ||
Sbjct 2621 ACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCGAGGGTTCGGCCGTCCTCG 2562
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || ||||||||||| | | |||||| |||| || | |||||||| ||
Sbjct 2561 AGCTGTTTACCGGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 2502
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| | || ||||||| || || || ||
Sbjct 2501 ATCTTGGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACCTCCAAAGTGATGGTTTTC 2442
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| |||||||| |||||
Sbjct 2441 CCAGTGAGGGTCTTGACGAAGATCTGCAT 2413
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || |||||| ||||||||||| ||||| || || |||| |||
Sbjct 2849 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCTTCC 2790
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| || || | | |||||| |||| ||| | ||||| || ||
Sbjct 2789 AGCTGCTTTCCGGCGAAAATAAGTCTCTGCTGGTCTGGAGGGATGCCTTCTTTGTCTTGG 2730
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| | ||| || || | || || ||||||
Sbjct 2729 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACTTCTAATGTGATGGTCTTT 2670
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||| ||||| || || |||||
Sbjct 2669 CCGGTCAAGGTTTTCACAAAAATCTGCAT 2641
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||| || ||||| || |||||| ||||||||||||||
Sbjct 3327 CATCCCTCCCCTTAGCCGAAGCACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATC 3268
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| | ||| | || |||| |||||||| ||||||||||| | |||||| || |
Sbjct 3267 AGCCAACGTACGCCCATCTTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGG 3208
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||||| | | |||||||| | ||
Sbjct 3207 TGGGATGCCTTCCTTATCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAACTCTC 3148
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || |||||||| || | ||||| || || || |||||
Sbjct 3147 GACCTCCAAAGTGATGGTCTTTCCAGTCAACGTCTTAACAAAAATCTGCAT 3097
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || || || ||| || || ||||| ||||| || ||| | | | || ||
Sbjct 3534 CACAAGATGCAGGGTAGACTCTTTCTGAATGTTATAATCAGCAAGTGTCCTCCCATCTTC 3475
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| ||||||||| ||||||||||| | ||||||||| | || | || ||||| ||
Sbjct 3474 CAACTGCTTCCCTGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCTTG 3415
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || || || | | ||||||||||| || ||||||||
Sbjct 3414 GATCTTTGCCTTCACATTATCAATCGTATCCGAGCTTTCCACCTCCAGAGTGATCGTCTT 3355
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | ||||| ||||| || |||||
Sbjct 3354 TCCAGTCAACGTCTTAACGAATATCTGCAT 3325
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || || |||||| ||||||||||| || || || || | || |||
Sbjct 3077 ACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCGGCCATCTTCC 3018
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| ||||| ||||||||||| | ||| || |||| || | |||||||| ||
Sbjct 3017 AGCTGTTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGGATGCCTTCCTTATCTTGG 2958
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| |||| | | |||||||| | || ||||||| || || ||||||
Sbjct 2957 ATCTTAGCTTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAAAGTGATGGTCTTT 2898
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||| ||||| || |||||
Sbjct 2897 CCGGTCAAGGTCTTAACGAAAATCTGCAT 2869
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| || || ||| ||||| ||||||||||| ||||| | || | || ||
Sbjct 2393 ACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTACGGCCATCTTCG 2334
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | | ||||| |||| || | |||||||| ||
Sbjct 2333 AGCTGCTTTCCGGCAAAGATGAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGG 2274
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||||| || ||||| | || || ||||||
Sbjct 2273 ATCTTGGCCTTGACGTTGTCGATTGTGTCGGAACTCTCAACCTCGAGAGTGATTGTCTTT 2214
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| || ||||| |||||
Sbjct 2213 CCAGTGAGGGTCTTAACAAAGATCTGCAT 2185
>seq276382
Length=2823
Score = 82.4 bits (90), Expect = 5e-11
Identities = 145/210 (69%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || || ||| |||||| || ||||| ||||| || ||| | | | || ||
Sbjct 2357 CACAAGATGCAG-GTGGACTCCTTCTGAATGTTATAATCAGCAAGTATCCTCCCATCTTC 2299
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||||| ||| ||||| | ||| ||||| || | || ||||| ||
Sbjct 2298 CAACTGCTTCCGTACAACGATCACCCTCTGTTGATCCAGTGGGATCCCCTCCTTATCTTG 2239
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || || || | | ||||||||||| || ||||||||
Sbjct 2238 GATCTTAGCCTTCACATTATCAATCGTATCCGAGCTTTCCACCTCCAGAGTGATCGTCTT 2179
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | ||||| ||||| || |||||
Sbjct 2178 TCCAGTCAACGTCTTAACGAATATCTGCAT 2149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357955066702002
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |