Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq156932 206 6e-48
seq284040 203 8e-47
seq62239 174 4e-38
seq25275 174 4e-38
seq259261 170 5e-37
seq228143 168 2e-36
seq277754 147 5e-30
seq268484 136 9e-27
seq243249 131 4e-25
seq141081 131 4e-25
seq118537 123 6e-23
seq276382 111 4e-19
seq13062 102 2e-16
seq145598 95.1 3e-14
seq235243 93.3 1e-13
seq180374 93.3 1e-13
>seq156932
Length=6713
Score = 206 bits (228), Expect = 6e-48
Identities = 173/212 (82%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||| ||||| || || |||||||| | || || || ||||| ||
Sbjct 3980 CAGATTTTCGTCAAAACCCTCACTGGGAAGACGATCACTTTGGAAGTCGAGAGCTCGGAT 3921
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| ||| |||||||| ||||| ||||||||||| || ||||| |||
Sbjct 3920 ACCATCGACAACGTGAAAGCCAAGATTCAAGACAAGGAAGGAATCCCACCAGACCAACAA 3861
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| |||||||||||||| |||||||| |||||||||| ||||| ||| ||
Sbjct 3860 AGACTCATCTTTGCCGGAAAACAGCTGGAAGATGGGCGGACTCTTGCGGATTACAACATC 3801
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
|| || ||||| || ||||||||||| ||||
Sbjct 3800 CAGAAGGAATCGACCCTGCATCTTGTGCTGAG 3769
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || ||||| ||||| || || || |||||||| |||
Sbjct 4208 CAAATCTTCGTCAAGACCTTGACCGGCAAAACCATCACTCTTGAAGTAGAAAGCTCTGAC 4149
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| ||||| ||||| || ||||||||
Sbjct 4148 ACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAG 4089
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||||||||| ||||| ||||| || || | |||||||| || || ||| ||
Sbjct 4088 CGATTGATCTTCGCCGGTAAACAACTCGAGGACGGCCGTACTCTTGCGGACTACAACATC 4029
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || ||||| || || ||||
Sbjct 4028 CAGAAGGAGTCAACCCTCCA-CTTG 4005
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| |||||||| || || || ||
Sbjct 4436 CAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGAGTTCCGAT 4377
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||| || ||||| ||||| || ||||| || |||||
Sbjct 4376 ACAATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCTCCAGATCAGCAG 4317
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| ||||||||||| || || | ||||| ||||| || ||| ||
Sbjct 4316 AGGCTGATCTTTGCCGGTAAACAGCTCGAGGACGGCCGAACTCTAGCCGACTACAACATC 4257
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 4256 CAAAAGGAGTCCACCCTCCA-CTTG 4233
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||| | || || || ||||||||| | |||||||| ||||| ||
Sbjct 3752 CAGATTTTCGTCAAGACTTTAACCGGGAAGACGATCACCTTGGAGGTGGAGAGCTCGGAT 3693
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || |||||||||||| || ||||| || || || ||||||||
Sbjct 3692 ACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAAGGGATTCCACCAGACCAGCAG 3633
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || || ||| | || ||||| | |||||||| ||||| || ||
Sbjct 3632 AGGTTGATATTCGCAGGGAAGCAGTTGGAGGATGGTCGTACTCTTGCGGATTACAATATC 3573
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || ||||||
Sbjct 3572 CAGAAGGAGTCGACTCTTCACCTTGTT 3546
>seq284040
Length=2693
Score = 203 bits (224), Expect = 8e-47
Identities = 171/210 (81%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || |||||||||||||| | |||||||||||||| |||
Sbjct 762 CAGATCTTCGTGAAGACGTTGACCGGAAAAACGATCACGTTGGAGGTGGAAAGCTCCGAC 821
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct 822 ACGATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAAGGAATCCCACCGGACCAGCAG 881
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || ||||||||||| ||||||||| | |||||||| ||| ||
Sbjct 882 CGTTTGATCTTCGCCGGCAAGCAGCTCGAAGACGGAAGGACTTTGGCCGATTACAACATC 941
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || ||||||| ||| ||
Sbjct 942 CAGAAGGAGTCCACGTTGCATCTGGTTCTG 971
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| || || || ||||| ||||| || ||||| || ||||| ||
Sbjct 306 CAGATCTTCGTCAAAACCCTAACCGGCAAAACAATCACTCTGGAGGTCGAGAGCTCCGAT 365
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| |||||||| ||||| || |||||
Sbjct 366 ACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAGCAG 425
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || || || || || || || || || ||| ||
Sbjct 426 CGCCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCAGAACCCTAGCGGACTACAACATC 485
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||||| ||
Sbjct 486 CAGAAGGAATCGACTCTTCATCTGGT 511
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || || || ||||| || || |||||||| ||||| ||
Sbjct 990 CAGATATTCGTGAAGACGTTGACCGGGAAGACGATTACTCTGGAGGTGGAGAGCTCCGAT 1049
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||||||||| ||||| || || || |||||||||||
Sbjct 1050 ACGATCGATAATGTCAAGGCCAAGATTCAGGATAAAGAGGGGATTCCACCGGACCAGCAG 1109
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || |||||||| ||||| |||||||| ||||||| || ||||| ||| ||
Sbjct 1110 AGGTTGATATTTGCCGGAAAGCAGCTGGAAGATGGCCGGACTCTGGCGGATTACAACATC 1169
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| |||||
Sbjct 1170 CAGAAGGAGTCCACCCTGCACCTTGT 1195
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| || || || || || ||||| || ||||| || ||||| ||
Sbjct 534 CAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCCGAT 593
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| |||||||| |||||||| |||||
Sbjct 594 ACGATCGATAACGTCAAGGCGAAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAG 653
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || || || || || || || ||| ||
Sbjct 654 CGTCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCAGAACCCTAGCGGACTACAACATC 713
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || || || |||
Sbjct 714 CAGAAGGAGTCGACTCTCCACCTCGTT 740
>seq62239
Length=9780
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || ||||| || ||||| ||||| ||| ||| |||
Sbjct 5554 CAGATCTTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTCGAATCCTCCGAC 5495
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| || ||||| ||||| ||||| ||||||||||||
Sbjct 5494 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAGCAA 5435
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || ||||| || ||||| || ||| ||
Sbjct 5434 CGCCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCAGGACCCTAGCCGACTACAACATC 5375
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 5374 CAGAAGGAGTCCACCCTCCACCTCGT 5349
>seq25275
Length=8276
Score = 174 bits (192), Expect = 4e-38
Identities = 164/208 (79%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| ||||| || ||||| ||||| || ||||| |||||||| |||
Sbjct 4794 CAAATCTTTGTCAAAACCCTCACCGGCAAAACCATCACGCTGGAGGTCGAAAGCTCTGAC 4853
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || || ||||| ||||| ||||| || || || ||||||||
Sbjct 4854 ACCATTGACAACGTGAAGGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAG 4913
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| |||||||| |||||||| || || | ||||||||||| |||||| ||
Sbjct 4914 AGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGTACTCTTGCCGACTATAACATC 4973
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || ||||| || || |||| ||
Sbjct 4974 CAGAAGGAGTCAACCCTTCA-CTTGGTT 5000
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || | ||||| || || ||||| || |||||||| || || |||
Sbjct 5934 CAGATCTTTGTTAAGACGTTGACAGGGAAGACCATCACGCTGGAGGTGGAGAGTTCGGAC 5993
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || ||| |||||||||||||| || || ||||| ||||| |||||
Sbjct 5994 ACGATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAGGGGATCCCACCGGATCAGCAG 6053
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || || || || ||||| || ||||||||||||||||| ||||||||| ||
Sbjct 6054 AGGCTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACTCTTGCGGATTATAACATC 6113
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || ||| | |||
Sbjct 6114 CAGAAGGAGTCTACCCTTCATTTGGTT 6140
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || ||||| || ||||| |||||||| || ||||| |||
Sbjct 5478 CAGATCTTTGTGAAGACATTGACCGGAAAGACCATCACTCTCGAGGTTGAGAGCTCCGAC 5537
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || |||||||| || || || || ||||| || ||||||||
Sbjct 5538 ACCATCGACAACGTGAAGGCTAAGATTCAAGATAAGGAGGGTATCCCACCAGACCAGCAG 5597
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || |||||||| ||||| | || ||||| || || ||| |
Sbjct 5598 AGGCTGATCTTTGCGGGTAAGCAGCTCGAGGATGGTCGTACGCTTGCTGACTACAACATT 5657
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || || ||| | |||
Sbjct 5658 CAGAAGGAATCGACCCTTCATTTGGTT 5684
Score = 136 bits (150), Expect = 9e-27
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||| | || ||||| || ||||| || || || || ||||| |||
Sbjct 5250 CAGATCTTTGTGAAGACTTTGACCGGAAAGACCATCACACTGGAAGTTGAGAGCTCCGAC 5309
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || || || || || ||||| |||||||| || ||||| |||
Sbjct 5310 ACCATCGACAACGTGAAGGCGAAAATCCAAGATAAAGAGGGAATCCCACCAGACCAACAA 5369
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||| || ||||| || ||||| | || ||||| || || ||| |
Sbjct 5370 AGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCAGACTACAACATT 5429
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || |||||||| || || ||||
Sbjct 5430 CAGAAGGAATCAACCCTTCA-CTTG 5453
>seq259261
Length=7884
Score = 170 bits (188), Expect = 5e-37
Identities = 167/215 (78%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||||||||| || || || || |||||||| | ||||| |||
Sbjct 2373 AAAATGC---AGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTCGAA 2429
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||| ||||| ||||| || ||||| |||||||| ||||| ||||| |||
Sbjct 2430 TCCTCCGACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCG 2489
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| || || ||||||||||| ||||||||||| || || ||||| || |||||
Sbjct 2490 GACCAGCAGCGCCTCATCTTCGCCGGGAAACAGCTCGAGGACGGCAGGACCCTAGCCGAC 2549
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||| |||| || || || || || || || ||
Sbjct 2550 TACAACATCCAGAAGGAGTCCACCCTCCACCTGGT 2584
>seq228143
Length=6931
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| | || ||||| || ||||| | || || |||||||| |||
Sbjct 2644 CAGATTTTTGTGAAAACCTTGACCGGAAAGACCATCACATTAGAAGTTGAAAGCTCCGAC 2703
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| || ||||||||||| |||||||| ||||||||
Sbjct 2704 ACCATTGACAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCTCCAGACCAGCAG 2763
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| ||||||||||| ||||| ||||| || | || |||||||| || ||| ||
Sbjct 2764 AGACTTATTTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTTGCCGACTACAACATC 2823
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 2824 CAGAAGGAGTCGACCCTTCA-CTTG 2847
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 177913 TTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGG 177972
||||| | | || || || || || || ||||| ||||| || ||||| |||||||| |
Sbjct 2177 TTAAACAGATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACAATCACTCTCGAGGTTG 2236
Query 177973 AAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
| || || ||||| ||||| |||||||| ||||| || ||||| ||||| || || |
Sbjct 2237 AGAGTTCCGACACAATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCC 2296
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| ||||||||| | || ||||| |||||||| |||||||||||||| | ||| | ||||
Sbjct 2297 CAGACCAGCAAAGGCTCATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGTACTTTAGCCG 2356
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
| || ||| |||| || ||||| || || |||
Sbjct 2357 ACTACAACATCCAGAAGGAATCCACCCTCCAT 2388
Score = 156 bits (172), Expect = 1e-32
Identities = 155/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || ||||| ||||| | ||||| || ||||| |||
Sbjct 2416 CAGATCTTCGTCAAGACCCTCACTGGGAAAACCATCACTTTGGAGGTCGAGAGCTCCGAC 2475
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || ||||| ||||| ||||| || ||||||||
Sbjct 2476 ACCATCGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAG 2535
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| ||||| ||||||||||| || || | || || || || || ||| ||
Sbjct 2536 AGACTCATCTTTGCCGGTAAACAGCTCGAGGACGGCCGAACCCTCGCAGACTACAACATC 2595
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || ||||| || || |||
Sbjct 2596 CAGAAGGAATCCACCCTCCAT 2616
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | || ||||| |||||||| || |||||||||||||| ||
Sbjct 3328 CAGATATTCGTTAAGACGTTGACTGGAAAGACGATCACTCTGGAGGTGGAAAGCTCGGAT 3387
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || |||||| || ||||| || || ||||| ||||| |||||
Sbjct 3388 ACGATTGATAATGTGAAGGCAAAGATCCAAGACAAGGAGGGGATCCCACCGGATCAGCAG 3447
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || || || ||| | |||||||| ||||| ||||| ||||||||| |
Sbjct 3448 AGGTTGATCTTTGCAGGGAAGCAGTTGGAAGATGGGAGGACACTTGCTGATTATAACATT 3507
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || |||||||||||
Sbjct 3508 CAGAAAGAGTCTACCCTGCATCTTGT 3533
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || | || ||||| || ||||| | ||||| || || ||||||
Sbjct 2872 CAGATTTTCGTTAAGACCTTGACCGGAAAGACCATCACTTTGGAGGTTGAGAGTTCAGAC 2931
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| ||||| || || || ||||| ||||| || ||||| ||
Sbjct 2932 ACCATTGATAATGTGAAAGCTAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAACAG 2991
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || || |||||||| |||||||| | || ||||| || || ||| ||
Sbjct 2992 AGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGCCGAACCCTTGCTGACTACAACATC 3051
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 3052 CAGAAGGAGTCGACCCTCCATCTGGT 3077
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || | || ||||| || ||||| | ||||| || || || |||
Sbjct 3100 CAGATTTTTGTTAAGACGTTGACTGGAAAGACCATCACTTTGGAGGTCGAGAGTTCGGAC 3159
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| ||||| || ||||| ||||| |||||||||||
Sbjct 3160 ACCATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAAGGCATCCCACCGGACCAGCAG 3219
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || || || || | |||||||| | || | || ||||| ||| ||
Sbjct 3220 AGGTTGATCTTTGCTGGGAAGCAATTGGAAGATGGGCGTACGTTGGCTGATTACAACATC 3279
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||||||
Sbjct 3280 CAGAAGGAGTCGACCCTTCATCTTGT 3305
>seq277754
Length=2847
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 10/219 (5%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
|| |||| || || ||||||||||| || || || || || || || || ||||| ||
Sbjct 2581 AAGATGCAGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATAACGCTGGAGGTTGAG 2640
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||| | ||||| ||| ||||| ||||| ||||| |||
Sbjct 2641 TCCTCCGACACCATCTACAACGTGAAAGCC---------GACAAGGAAGGCATCCCACCG 2691
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||||||||| || ||||||||||||||||| ||||| || || || || || |||||
Sbjct 2692 GACCAGCAACGGCTCATCTTCGCCGGAAAACAACTCGAGGACGGTAGAACCCTAGCCGAC 2751
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCT-TGTTTT 178132
|| ||| ||||||| || || || || ||||| ||||||
Sbjct 2752 TACAACATCCAAAAGGAGTCTACGCTCCATCTGTGTTTT 2790
>seq268484
Length=6331
Score = 136 bits (150), Expect = 9e-27
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || | ||||| | ||||| || ||| |||
Sbjct 1124 CAGATCTTCGTGAAAACCCTAACCGGCAAGGCCATCACGTTGGAGGTCGAGTCCTCCGAC 1065
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| ||| ||||| || ||||| ||||| ||||| |||||||| |
Sbjct 1064 ACCATCGACAACGTGAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGTCGGACCAGTAG 1005
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||||||| ||||||| || || | | || ||||| || ||| ||
Sbjct 1004 CGCCTCATCTTCGCCGGAAAATAGCTCGAGGACGGCGGACCCCTAGCCGACTACAACATC 945
Query 178104 CAAAAAGAAT 178113
|| || ||||
Sbjct 944 CAGAAGGAAT 935
>seq243249
Length=1014
Score = 131 bits (144), Expect = 4e-25
Identities = 148/200 (74%), Gaps = 9/200 (5%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
|| |||| || || || ||||||||||| || || || || || || | ||||| ||
Sbjct 949 AAGATGCAGCAGATCTTTGTGAAAACTCTAACCGGCAAGACCATAACGTTGGAGGTTGAG 890
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||| | ||||| ||| ||||| ||||| ||||| |||
Sbjct 889 TCCTCCGACACCATCTACAACGTGAAAGCC---------GACAAGGAAGGCATCCCGCCG 839
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||||||||| || ||||||||||||||||||||||| || || || || || |||||
Sbjct 838 GACCAGCAACGGCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCAGAACCCTAGCCGAC 779
Query 178095 TATAACGTCCAAAAAGAATC 178114
|| | | ||||||| || ||
Sbjct 778 TACAGCATCCAAAAGGAGTC 759
>seq141081
Length=4874
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987
|||| ||||| ||| | || | ||| || ||||| | ||||| ||||||||||||||
Sbjct 2212 TTTTGGTGAAGACTTTGACTGAAAAGACCATCACTTTAGAGGTCGAAAGCTCAGACACTG 2153
Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047
| || ||| | || ||||| || ||||||||| | ||||||| |||||||| |||
Sbjct 2152 TTGACAACATGAAGGCCAAGATCCAAGACAAAGAATGCATCCCTCTAGACCAGCAGAGAC 2093
Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107
|||| || || ||||||| || ||||| || | || ||||| || || |||||||| |
Sbjct 2092 TTATTTTTGCTAGAAAACAACTGGAAGACGGTCGAACCCTTGCTGACTACAACGTCCAGA 2033
Query 178108 AAGAATCAACACTGCAT 178124
| || || || || |||
Sbjct 2032 AGGAGTCCACTCTCCAT 2016
>seq118537
Length=769
Score = 123 bits (136), Expect = 6e-23
Identities = 141/188 (75%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 177927 ATTTTCGTGAAAA-CTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACAC 177985
|| ||| |||||| | || | || || || ||||| | ||||| || ||| |||||
Sbjct 465 ATCTTCTTGAAAAACCCTAATCGGCAAGACCATCACGTTGGAGGTCGAGTCCTCCGACAC 406
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
| |||| ||||| ||| ||||| || ||||| ||||| |||| ||||||||||||||
Sbjct 405 CGTCGACAACGTGAAAGCCAAGATCCAAGACAAGGAAGGCTTCCCGCCGGACCAGCAACG 346
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| | ||| |||| |||||||||||| || || || || || ||||| || || ||||
Sbjct 345 CCTCAACTTTGCCGAAAAACAGCTCGAGGACGGCAGAACCCTAGCCGACTACAATATCCA 286
Query 178106 AAAAGAAT 178113
|| ||||
Sbjct 285 GAAGGAAT 278
>seq276382
Length=2823
Score = 111 bits (122), Expect = 4e-19
Identities = 149/206 (72%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | || ||||| |||||||| || |||||||||||||| ||
Sbjct 2152 CAGATATTCGTTAAGACGTTGACTGGAAAGACGATCACTCTGGAGGTGGAAAGCTCGGAT 2211
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| || || || || || ||||| | ||| || ||
Sbjct 2212 ACGATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAGGGGATCCCACTGGATCAACAG 2271
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||| | | | || ||| | |||||||| |||| ||||| ||||||||| |
Sbjct 2272 AGGGTGATCGTTGTACGGAAGCAGTTGGAAGATGGGAGGATACTTGCTGATTATAACATT 2331
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || |||||||||||
Sbjct 2332 CAGAAGGAGTCCAC-CTGCATCTTGT 2356
Score = 109 bits (120), Expect = 1e-18
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| ||||| ||||| || | ||||| || || ||||||||||| || || || ||| |
Sbjct 1717 ACCGGAAAGACGATAACTTTGGAGGTCGAGAGTTCAGACACCATTGACAATGTGAAAGCA 1776
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| || || || || || ||||| || ||||| | | | || || ||||||||
Sbjct 1777 AAGATCCAAGATAAGGAGGGCATCCCACCAGACCAATAGAGGTTGATATTTGCCGGAAAG 1836
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| ||||||| | || ||||| || || ||| |||| || || || || || |||
Sbjct 1837 CAGCTTCAAGATGGCCGAACCCTTGCGGACTACAACATCCAGAAGGAGTCGACCCTCCAT 1896
Query 178125 CTTGTTTT 178132
|| || ||
Sbjct 1897 CTGGTATT 1904
>seq13062
Length=30343
Score = 102 bits (112), Expect = 2e-16
Identities = 149/212 (70%), Gaps = 9/212 (4%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
|| |||| || || ||||| ||||| || || || || || || || | ||||| ||
Sbjct 28776 AAGATGCAGCAGATCTTCGTAAAAACCCTAACCGGCAAGACCATAACATTGGAGGTTGAG 28717
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||| | ||||| ||| ||||| ||||| ||||| |
Sbjct 28716 TCCTCCGACACCATCTACAACGTGAAAGCC---------GACAAGGAAGGCATCCCGTTG 28666
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||||||||| || ||||||| || |||| ||||||| || || | || || |||||
Sbjct 28665 GACCAGCAACGCCTCATCTTCGACGAAAAATAGCTCGAGGACGGCAAAACCCTAGCCGAC 28606
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCT 178126
|| ||| || | || || || || || |||||
Sbjct 28605 TACAACATCTAGAAGGAGTCCACGCTCCATCT 28574
>seq145598
Length=10865
Score = 95.1 bits (104), Expect = 3e-14
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071
|||||||||| || |||||||| || || || | | || || || || || || | |
Sbjct 9645 AGGACAAAGAGGGTATCCCTCCAGATCAACAGAGGTTGATTTTTGCTGGCAAGCAATTAG 9586
Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
| |||||| | || ||||| || || ||| |||| |||||||||||||| |||||||||
Sbjct 9585 AGGATGGACGAACACTTGCTGACTACAACATCCAGAAAGAATCAACACTCCATCTTGTTC 9526
Query 178132 TGAGACTCAG 178141
| ||||| ||
Sbjct 9525 TAAGACTGAG 9516
>seq235243
Length=330
Score = 93.3 bits (102), Expect = 1e-13
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 178015 ACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAG 178074
|||| ||||| ||||| |||||||| |||| || ||||||||||||||||||||||| |
Sbjct 291 ACAAGGAAGGCATCCCGCCGGACCAACAACACCTCATCTTCGCCGGAAAACAGCTCGAGG 232
Query 178075 ATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || || || ||||| || ||| ||
Sbjct 231 ATGGTAGAACCCTAGCCGACTACAACATC 203
>seq180374
Length=6896
Score = 93.3 bits (102), Expect = 1e-13
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| ||||||||||| ||||| ||| | |||||||||||||| ||||| || ||||| |
Sbjct 1903 AGGTATCCCTCCGGATCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCG 1962
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||||||||||||| ||| | || ||||
Sbjct 1963 AACTCTTGCCGATTACAACATTCAGAAAG 1991
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || || |||||||| ||||| || ||| |||
Sbjct 1717 CAGATCTTCGTGAAAACCCTAACCGGGAAGACCATCACCCTTGAGGTCGAGAGCAGCGAC 1776
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATC 178028
|||||||| || ||||| |||||||||||||| ||||| |||
Sbjct 1777 ACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGTATC 1821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1196576467759764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |