Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_001335.1 Length=52297 Score E Sequences producing significant alignments: (Bits) Value seq103996 82.4 3e-11 seq37623 82.4 3e-11 >seq103996 Length=666 Score = 82.4 bits (90), Expect = 3e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4356 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTG 4413 || ||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||| Sbjct 456 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 399 >seq37623 Length=2350 Score = 82.4 bits (90), Expect = 3e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 4356 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTCCAGGTTCGACTCCTG 4413 || ||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||| Sbjct 1361 GTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTG 1304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166963513353062