Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq11270 327 1e-84
seq99200 208 8e-49
seq105869 178 1e-39
seq12926 143 3e-29
seq1213 143 3e-29
seq7667 141 1e-28
seq11477 140 3e-28
seq8420 138 1e-27
seq9422 127 2e-24
seq35533 118 1e-21
seq1750 107 2e-18
seq2568 104 2e-17
seq3441 102 8e-17
seq32675 100 3e-16
seq16751 95.1 1e-14
seq13269 95.1 1e-14
seq104979 86.0 6e-12
seq93805 86.0 6e-12
seq10846 86.0 6e-12
seq124414 82.4 8e-11
>seq11270
Length=18388
Score = 327 bits (362), Expect = 1e-84
Identities = 536/769 (70%), Gaps = 5/769 (1%)
Strand=Plus/Minus
Query 116593 GAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAA 116652
|||||| ||||||| || ||||| || || |||||||| || ||| ||||||||
Sbjct 6081 GAACCCGGACCGGTTCTGCATGTTCCCGATTCAGTACCCGGAGATCTGGGAGATGTACAA 6022
Query 116653 AAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGA 116712
||||||||||| ||||||||||||| |||||||| || || ||| ||| | |
Sbjct 6021 GAAGGCCGAGGCCTCGTTCTGGACCGCAGAGGAGGTCGATCTCTCCGGCGACTTACGTCA 5962
Query 116713 CTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGC 116772
|||||| | | | |||| |||| | || ||| ||| |||||||| ||||| |||||
Sbjct 5961 CTGGGAAAACCTAACCGACGGCGAGAGGCACTTCGTCACTCACGTGCTCGCCTTCTTCGC 5902
Query 116773 CGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGT 116832
|||| |||||||||||| |||||||||| || | ||| ||||||| || ||
Sbjct 5901 CGCCTCCGACGGCATCGTTTTGGAGAATCTGGCCGGAAGGTTCATGAAGGAGGTCCAAGT 5842
Query 116833 GGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAAT 116892
| ||||| || ||||| ||||| ||||| || || ||||| | ||||| |||||
Sbjct 5841 TTCGGAGGCTCGCGCTTTCTATGGCTTCCAGATTGCGATCGAGAATATCCACTCTGAAAT 5782
Query 116893 GTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAA 116952
||| | | |||| || || | |||| |||||| ||| |||| |
Sbjct 5781 GTACAGTCTCTTGCTCGAGACCTATATCAAGGACTCGGCCGAGAAGAACCGGCTGTTCCA 5722
Query 116953 CGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGC 117012
||| || ||||| | || ||||| |||||||||||||||| ||||| |||||||
Sbjct 5721 CGCGATGGAGACCGTTCCTTGCGTGGCGAAGAAGGCCGAGTGGGCCCTGCGGTGGATCGA 5662
Query 117013 CGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTT 117072
|||| |||| | |||| |||| | || | || ||||| |||||| ||| | ||
Sbjct 5661 CGGCGGAGA---ATCGTTCGCCGAGAGGCTCATCGCTTTCGCCTGCGTCGAAGGCATTTT 5605
Query 117073 CTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132
||| || || || ||| ||| ||||||||||| || || ||||| | |||||||| |
Sbjct 5604 CTTCTCCGGTAGCTTCTGCGCGATATTTTGGCTAAAAAAGCGCGGGTTAATGCCCGGGTT 5545
Query 117133 GACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTT 117192
|| ||| ||||||| | ||||| | ||||| || || || ||||| || || || |
Sbjct 5544 AACCTTCTCCAACGAGTTGATCTCGCGAGACGAAGGCCTCCACTGCGATTTCGCGTGCCT 5485
Query 117193 GCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGA 117252
||| | || | ||| || | ||||| || |||||| | || |||||| |||
Sbjct 5484 GCTCTACACTCTCTTGCGCAAGAAGCTGAGCGAGGAGCGCGTGAAGGGGATCGTTCGCGA 5425
Query 117253 CGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTG-CCGGTGCGTCTGCTGGGAC 117311
|||||| | || ||| | || | ||| |||||| || | |||| | |||||
Sbjct 5424 CGCGGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTGCCCTGCGCGTTGGTTGGGA- 5366
Query 117312 TCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCT 117360
| || |||| |||| || ||||||||||| || || ||||||||
Sbjct 5365 TGAACGGCGATCTGATGAGCCAGTACATCGAGTTTGTGGCTGACAGGCT 5317
>seq99200
Length=725
Score = 208 bits (230), Expect = 8e-49
Identities = 465/690 (67%), Gaps = 11/690 (2%)
Strand=Plus/Minus
Query 116681 GAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAG 116737
|| |||||||| || || || || | | ||||||| | | | |||||| | |||
Sbjct 725 GAAGAGGTGGATCTCTCAAAAGATATGCACGACTGGCACAACAAGCTCAACGACGATGAG 666
Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797
| | || ||| ||||| || || || ||||| ||| ||||| || |||||||||
Sbjct 665 AGATACTTTATCTCACACGTCCTTGCTTTCTTCGCTGCCTCTGACGGTATTGTCAACGAG 606
Query 116798 AATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGC 116857
|| || |||||| | ||| | |||||||| || | ||||| || ||||| || ||
Sbjct 605 AACCTTGTCGAGAGATTCTCGGGTGAGGTGCAAGTACCAGAGGCTCGATGCTTTTATGGT 546
Query 116858 TTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|| |||||| |||||||| | ||||| |||||||| ||||| || || |
Sbjct 545 TTCCAGATCATGATGGAGAATATCCACTCCGAAATGTACAGCTTGCTCATTGATACATTT 486
Query 116918 GTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTC 116977
||| | || |||| | | || | || ||||| || || || ||| ||
Sbjct 485 GTGAAAGAGCCAAAGCAGAAACAGTACCTCTTCGATGCTATCGACACTATTCCATGCATC 426
Query 116978 AAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAG 117037
||||||| ||||||||| || | |||||| | | | || | |||| | |
Sbjct 425 CGCAAGAAGGCTGAGTGGGCGTTGAGATGGATCTCTGATAAGGAAAGCAGTTTCGCCCAA 366
Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097
|| |||||||| ||||| ||||| |||||| ||||||| || || ||||||| ||||
Sbjct 365 CGTCTGGTGGCATTCGCCGCCGTTGAGGGCATCTTCTTCTCCGGGTCTTTCGCCTCCATT 306
Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157
|| ||||||||||| | || |||||||| || ||||| ||| ||||||||| |||||
Sbjct 305 TTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTGATCTCT 246
Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT--GTTCAAGCATTTGGTGCAGC 117215
| || || ||| |||| || || ||||| |||| ||| ||| | | |
Sbjct 245 CGTGATGAAGGTATGCACACAGATTTCGCCTGCCTGCTACTGTCACACATGCACTTC--C 188
Query 117216 GACCGAGCG-CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGC 117274
| || |||| || | ||| |||| || ||| || || |||||||||||
Sbjct 187 GCCCAAGCGCCGATGTTATTCA-AAAGATTATCCTCGAGGCTGTTGCCATCGAGCAAGAG 129
Query 117275 TTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCA 117333
||| | || || || || || |||| |||||| || | || || | ||| |||
Sbjct 128 TTCTTGACGGACGCTCTACC-ATGCGCTCTGCTTGGCATGAACAGCAACCTCATGAAGCA 70
Query 117334 ATACATCGAGTTCGTCGCCGACAGGCTGCT 117363
||||||||||||||| || ||||| || ||
Sbjct 69 ATACATCGAGTTCGTTGCTGACAGACTACT 40
>seq105869
Length=645
Score = 178 bits (196), Expect = 1e-39
Identities = 213/286 (74%), Gaps = 5/286 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| ||||| || |||||||| | ||||||| | || ||
Sbjct 515 ATCTGGCAAATGTACAAGAAGGCTGAGGCATCCTTCTGGACTGCCGAGGAGATCGATCTA 456
Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| || ||| | ||||||||| ||| | ||||| || ||
Sbjct 455 TCCAAGGATCTTCATGATTGGAACAAGCGCTTGAATGACGATGAGCGATTCTTTATTTCC 396
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || ||||| ||||| ||| ||||| ||||| ||||||||||| |||||||||
Sbjct 395 CACGTTCTCGCCTTCTTCGCTGCCTCAGACGGAATCGTGAACGAGAATCTTGTCGAGCGT 336
Query 116813 TTCGC-TCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| | |||| |||| ||||| | ||||| || |||||||| ||||| |||||| ||
Sbjct 335 TTCTCATCAG-AGGTCCAGGTTCCAGAGGCACGATGCTTCTATGGCTTCCAGATCATGAT 277
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | ||||| || | || || |||||||||||| |||
Sbjct 276 GGAGAATATCCACTCCGAGACATACTCCCTCCTCATCGACACATAC 231
>seq12926
Length=15191
Score = 143 bits (158), Expect = 3e-29
Identities = 164/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || ||||| ||||| || || || |||||||||||| | || || ||
Sbjct 527 AAAGATGCAGATCTTCGTGAAAACCCTAACCGGAAAAACCATCACCCTGGAGGTGGAGAG 468
Query 40746 CACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| |||||| | | | |||| |||||| || || | ||||| || ||||| ||| |||
Sbjct 467 CTCCGACACCATAGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGG 409
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
||||||| | ||||||| ||| || ||||| |||| |||| ||||||||| ||| |
Sbjct 408 ACCAGCAGAGGCTCATCTTCGCCGGTAAACAATTGGAGGACGGTCGCACCCTCGCCGATT 349
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
| ||||| |||||||| | || |||||| | ||||||
Sbjct 348 ATAACATTCAGAAGGAATCGACTCTGCATTTGGTGTTG 311
>seq1213
Length=84466
Score = 143 bits (158), Expect = 3e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || |||||||| ||||||||| | || ||||| || |
Sbjct 57023 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTCGAGTCCTCA 57082
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| || || | ||||| || || ||||| ||||||||
Sbjct 57083 GACACCATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCGCCGGACCAG 57142
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| || || |||||||| || | || ||||| ||||||||||
Sbjct 57143 CAGCGGCTCATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGAACCCTAGCCGACTACAAC 57202
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918
|||||||||||| | || || || || ||| | ||| | | |||||||
Sbjct 57203 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGCGGCGGCG 57251
>seq7667
Length=27334
Score = 141 bits (156), Expect = 1e-28
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| || || ||||| |||||||| |||| ||||| | |
Sbjct 27047 ATGCAAATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCA 27106
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| || || |||||| | |||||
Sbjct 27107 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCA 27165
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | || |||| ||| || || || || || |||| ||||||||| |||||||||
Sbjct 27166 GCAAAGGCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCCTCGCCGACTACAA 27225
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| ||| || ||||| ||
Sbjct 27226 CATCCAGAAGGAAAGCACCCTCCATCTCGT 27255
>seq11477
Length=17588
Score = 140 bits (154), Expect = 3e-28
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || ||||| ||||| || || || |||||||||||| | || || ||
Sbjct 517 AAAGATGCAGATCTTCGTGAAAACCCTAACCGGAAAAACCATCACCCTGGAGGTGGAGAG 458
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| |||||| | | | | |||||| || || | ||||| || ||||| ||| ||||
Sbjct 457 CTCCGACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGA 398
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| | ||||||| ||| || |||||| | || |||| ||||||||| ||| ||
Sbjct 397 CCAGCAGAGGCTCATCTTCGCCGGAAAACAGTTAGAGGACGGTCGCACCCTCGCCGATTA 338
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
||||| |||||||| | || |||||| | ||||||
Sbjct 337 TAACATTCAGAAGGAATCGACTCTGCATTTGGTGTTG 301
>seq8420
Length=24920
Score = 138 bits (152), Expect = 1e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||||||||||||| | || ||||| | |
Sbjct 58 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACCTTGGAGGTCGAGAGCTCT 117
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| ||||| | ||||| ||||||||||| | |||||
Sbjct 118 GACACCATCGACAACG-TGAAGGCTAAAATCCAGGACAAGGAGGGCATCCCACCAGACCA 176
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| ||| || || ||||| || |||| ||||||||| |||||||||
Sbjct 177 GCAGAGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGCGCACCCTTGCCGACTACAA 236
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | || || || || ||
Sbjct 237 CATCCAGAAGGAATCGACCCTTCACCTTGT 266
>seq9422
Length=22427
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || ||||| || ||||| ||| | || || || || |
Sbjct 12067 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTTGAGGTTGAGTCCTCA 12008
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||||| || || | ||||| ||||| ||||| |||||||
Sbjct 12007 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCACCGGACCAA 11948
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || |||||||| || || | || ||| | ||||||||||
Sbjct 11947 CAGCGCTTGATCTTCGCCGGAAAACAGCTCGAGGATGGCCGAACCTTGGCCGACTACAAC 11888
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| ||||||| || || |||
Sbjct 11887 ATCCAGAAGGAGTCCACGCTTCACCTTGTG 11858
>seq35533
Length=2598
Score = 118 bits (130), Expect = 1e-21
Identities = 213/301 (71%), Gaps = 8/301 (3%)
Strand=Plus/Minus
Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157
|| ||||||||||| || || |||||||| || || || ||| |||||||||||||||
Sbjct 2598 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCT 2539
Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAG-CG 117216
| |||||||| |||| ||||| || || ||||| | | || || | || |
Sbjct 2538 CGTGACGAGGGCATGCACACTGACTTCGCTTGCTTGCTCTACTCACACCTGCAGAAGAAG 2479
Query 117217 ACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTT 117276
|||| | | || ||| | || ||| |||| || || |||||||||||||| ||
Sbjct 2478 CCCGA-CACACAGCTCGTACGCGACATCATCACAGAGGCCGTCGCCATCGAGCAAGAGTT 2420
Query 117277 CCTCACCGAAGCGCTG-CCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAA 117334
|||||| || || ||| || |||| || || || | || || | || |||| ||
Sbjct 2419 CCTCACTGATGCTCTGCCCTGTGC-CCTACTCGGCATGAA-CGCCACACTTATGTGCCAG 2362
Query 117335 TACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT-GGTCGGCGCCAAGCACTACAA 117393
|||||||| |||||||| ||| | || || ||| || |||| | | |||||||||||
Sbjct 2361 TACATCGAATTCGTCGCAGACCGCCTTCTCGTCGCCCTCGGTC-TCACAAAGCACTACAA 2303
Query 117394 C 117394
|
Sbjct 2302 C 2302
>seq1750
Length=74028
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || ||||| || ||||| || ||||| |||| || || | |
Sbjct 62694 ATGCAGATTTTTGTGAAGACGCTAACAGGCAAGACAATCACACTCGAAGTGGAGAGCTCT 62753
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | |||| ||| |||| ||||| ||||| ||||| | || |||
Sbjct 62754 GATACCATTGACAATGTGAAGGCAAAGATTCAGGACAAGGAGGGAATCCCACCTGATCAG 62813
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || || || |||||||| || | ||||| || ||||||||
Sbjct 62814 CAGAGGCTCATCTTTGCAGGAAAGCAGCTGGAGGATGGTCGCACACTTGCAGACTACAAT 62873
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| ||| |||||||| ||
Sbjct 62874 ATCCAGAAGGAGAGCACTCTGCATCTTGT 62902
>seq2568
Length=64926
Score = 104 bits (114), Expect = 2e-17
Identities = 137/189 (72%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751
|||||| ||||| ||||| || || ||||| |||||||| |||| ||||| | | ||
Sbjct 42773 GCAAATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCAGA 42714
Query 40752 CAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCA 40811
|| | | | |||||| || || | ||||| || || || ||| | |||||||
Sbjct 42713 CACCATCGACGATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAAACCAGCA 42654
Query 40812 ACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 40871
| | || |||| ||| || || || || || |||| | |||||||| | ||||||||||
Sbjct 42653 AAGGCTGATCTTCGCTGGAAAGCAACTCGAGGACGGCCACACCCTCATCAACTACAACAT 42594
Query 40872 CCAGAAGGA 40880
||| |||||
Sbjct 42593 CCA-AAGGA 42586
>seq3441
Length=50379
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| ||||| || || || || || || |||||||||||| | || || ||| | |
Sbjct 14830 AATGCAGATATTTGTCAAGACCCTGACTGGAAAAACCATCACCTTGGAGGTGGAAAGCTC 14771
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | | |||||| |||||| | ||||||||||| ||||| | |||||
Sbjct 14770 GGATACCATTGATAATGTCAAGGCAAAAATACAAGACAAAGAGGGTATCCCACCAGACCA 14711
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | || | || ||||| ||||| || || | || ||||| ||||| ||
Sbjct 14710 GCAGAGGTTGATTTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACCCTTGCAGACTATAA 14651
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||| |||||| | || || ||
Sbjct 14650 CATCCAAAAGGAGTCTACCCTCCA 14627
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || ||||| || || | || |||||| | |
Sbjct 14601 ATGCAAATTTTTGTTAAGACTTTGACAGGTAAAACAATAACATTGGAGGTCGAAAGCTCG 14542
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| | ||| || | ||||| ||||| ||||| | |||||
Sbjct 14541 GATACCATTGACAATGTCAAAGCAAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAA 14482
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| |||||||| ||||| || |||| || || || ||||| |||
Sbjct 14481 CAGAGGTTGATCTTTGCGGGCAAGCAGCTCGAAGACGGTCGTACTCTTGCAGACTATAAC 14422
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || ||| | |||
Sbjct 14421 ATCCAGAAGGAGTCCACCCTCCATTTGGTG 14392
>seq32675
Length=3033
Score = 100 bits (110), Expect = 3e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || ||||| ||| ||||| |||| | ||||||| ||| || ||||| ||||
Sbjct 2773 GACAAGGAAGGCATTCCCCCGGACTAGCAGAGGCTCATCTTCGCTGGTAAACAATTGGAG 2832
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| || |||||| ||| |||||||||||||| ||| | ||||| || || ||||||
Sbjct 2833 GACGGTCGTACCCTCGCCGATTACAACATCCAGAAAGAGTCAACGCTTCACCTCGTGTTG 2892
>seq16751
Length=10463
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||| ||||||||| | || || ||| | |
Sbjct 7203 ATGCAGATCTTTGTTAAGACACTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCA 7144
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| | || || | ||||| || || ||||| | ||||||
Sbjct 7143 GACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 7084
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || || || ||||| || |||| ||||| || |||||||||
Sbjct 7083 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAAGACGGTCGCACACTTGCAGACTACAAC 7024
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||| ||||| |||| || || || |||
Sbjct 7023 ATCCAAAAGGAATCCACCCTTCACCTGGTG 6994
>seq13269
Length=14915
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| ||||| || || ||||| || |||| ||||| | |
Sbjct 13210 ATGCAGATCTTCGTCAAAACTCTCACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 13269
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||| | |||||| | ||||| ||||| ||||| | ||||||
Sbjct 13270 GATACAATAGATAATGTCAAAGCAAAAATACAGGACAAGGAGGGAATCCCACCAGACCAG 13329
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| || ||||||||| |||| || | || || | || ||||||
Sbjct 13330 CAGAGGCTGATCTTTGCAGGCAAACAGTTGGAGGATGGTCGAACTTTGGCTGATTACAAC 13389
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||| || |||| || || | || | || ||||| || ||
Sbjct 13390 ATCCAGAAAGAATCCACCCTCCACTTGGTTCTTCGTTTGAGAGGTGG 13436
Score = 82.4 bits (90), Expect = 8e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || ||||| || || || ||||| ||||||||| | || ||||| | |
Sbjct 13893 AATGCAAATCTTTGTAAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTC 13952
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | | |||| |||||||| || ||||| || || || | |||||
Sbjct 13953 TGATACAATTGACAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATTCCACCAGACCA 14012
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| | || || | ||| || |||||||| || || | | || | ||||| ||
Sbjct 14013 ACAGAGGCTGATATTCGCTGGAAAACAGCTCGAGGATGGCAGGACTTTGGCTGACTATAA 14072
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
||||||||| ||| | || || |||
Sbjct 14073 CATCCAGAAAGAGTCTACTCTTCAT 14097
>seq104979
Length=655
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || || || || | ||||||||||| || |||| ||| ||||||||||| ||
Sbjct 226 GACAAGGAAGGGATTCCACCAGACCAGCAACGTCTGATCTTCGCCGGCAAACAGCTCGAG 167
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| | ||| |||||||||||||||||| | || || || | ||| ||
Sbjct 166 GATGGACGCACTTTGTCCGATTACAACATCCAGAAGGAGTCTACCCTCCACTTGGTGCTG 107
Query 40903 CG 40904
||
Sbjct 106 CG 105
>seq93805
Length=797
Score = 86.0 bits (94), Expect = 6e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || || ||||| | |||||||| ||| | |||| ||| ||||| || ||||
Sbjct 454 GACAAGGAAGGAATCCCACCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAATTGGAG 513
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | || || || |||||||||||| ||||||||| | || |||||| | ||||||
Sbjct 514 GATGGCCGAACTCTGTCCGACTACAACATTCAGAAGGAGTCGACTCTGCATTTGGTGTTG 573
>seq10846
Length=19378
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| || || || || ||||| || | || || ||| | |
Sbjct 11958 ATGCAAATCTTTGTTAAAACCCTTACTGGGAAGACCATAACTTTGGAAGTTGAAAGCTCA 11899
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | || | || || | ||||| ||||| ||||| | ||||||
Sbjct 11898 GACACTATAGATAATGTTAAAGCTAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAG 11839
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || ||||| ||||| || || | |||||||| |||||||||
Sbjct 11838 CAGAGGTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTTGCGGACTACAAC 11779
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||| ||||| |||| || || || |||
Sbjct 11778 ATCCAAAAGGAATCCACCCTCCACCTGGTG 11749
>seq124414
Length=715
Score = 82.4 bits (90), Expect = 8e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || || ||||| || || | || || ||| | |
Sbjct 286 ATGCAAATTTTTGTTAAGACTTTGACAGGTAAAACAATAACATTGGAGGTGGAAAGCTCG 227
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||||| ||| || | ||||| ||||| ||||| | |||||
Sbjct 226 GATACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAA 167
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | | |||| || ||||| ||||| || || | || || || ||||| |||
Sbjct 166 CAGAGGTTGATCTTTGCAGGCAAGCAGCTCGAAGATGGTCGTACTCTTGCAGACTATAAC 107
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || ||| | |||
Sbjct 106 ATCCAGAAGGAGTCCACCCTCCATTTGGTG 77
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514358854778640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |