Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq99200 89.7 1e-12 >seq99200 Length=725 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || || || ||||| || |||||||| || | ||||| |||||||||||| Sbjct 359 GTGGCATTCGCCGCCGTTGAGGGCATCTTCTTCTCCGGGTCTTTCGCCTCCATTTTCTGG 300 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| || ||| | |||||||||| || | |||||| ||| | || ||| | || Sbjct 299 CTCAAGAAGAGAGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTGATCTCTCGTGAT 240 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT 102069 |||||| | || || || || ||| |||| Sbjct 239 GAAGGTATGCACACAGATTTCGCCTGCCTGCT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987890219057495