Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq78534 116 3e-21
>seq78534
Length=1057
Score = 116 bits (128), Expect = 3e-21
Identities = 214/311 (69%), Gaps = 2/311 (1%)
Strand=Plus/Minus
Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025
|| || |||||||| |||||||| || | ||| ||| ||| |||||||| || | |
Sbjct 384 AAACCAGGACATTCATTGGGACACATCAGTGTCCAGTCTGCATTCTTTTCTACTCGCTTC 325
Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084
|| |||| ||||| | ||| | || ||| || | |||| ||| ||| |||||| ||
Sbjct 324 ATGAATAGGTCAGGAATCCAGAGAGC-GTAGAAGAGATCTCTGGCTCTGACTTCTTCTTT 266
Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144
|| |||||||| ||| | || | ||||||| ||||||||||||||| || | ||
Sbjct 265 GCCGTGGTTCTTTCTCAAGTTGAGCCACTCGAATACATCAGCGTGCCATGGCTCAAGGTA 206
Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204
||| | | || |||||||| || | || || |||| | || | | | ||||| |
Sbjct 205 AATGGCGAAGGCACCTGGTCTCTTGTTGCCGCCTTGATCGACGTACCGAGCAGTGTTGTC 146
Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264
| | | || | |||||| | ||| || || |||||||| |||| | || || |
Sbjct 145 AAAGACTCGCAGCATAGGCGTCAGACCGTTCGAAGTGCCGTTTGTACCCGCGATGTATGA 86
Query 38265 ACCCTTAGCTC 38275
||| | ||||
Sbjct 85 ACCTGTGGCTC 75
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467742428006160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |