Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_004685.1
Length=69777
Score E
Sequences producing significant alignments: (Bits) Value
seq64155 113 2e-20
>seq64155
Length=1483
Score = 113 bits (124), Expect = 2e-20
Identities = 215/308 (70%), Gaps = 14/308 (5%)
Strand=Plus/Minus
Query 55601 ACCCGGTCGGGCTCGCCCAGCTCCAGCCGCTGATCGTTCTCGGTGATCTGCTGCACCAGC 55660
|||||||| | ||| ||| | | |||| || ||||||||| | ||||| ||| | |
Sbjct 1182 ACCCGGTCCGTGTCGGTCAGATGCTGCCGGTGCTCGTTCTCGACCAACTGCTCCACGATC 1123
Query 55661 CGGGTCGCCGTG---TCCAGCTCAGCCGGGATCACATACACCGGCACCTCTGTCAGCTCA 55717
|| |||||||| || || ||| | | || || ||||| | | | | | |
Sbjct 1122 CGCCTCGCCGTGGAGTCGTCATCGGCCCGCACGAC-TAGACCGGGATCGTGGCGATCGCG 1064
Query 55718 GCCTCCCGCGCTGCGAGGGTGCGACGCTGGCCGGCACGGACATGCAGCACTCCGTCCTCG 55777
||||| ||||||||||||||||| |||||||| ||||||||||||| | ||||| |
Sbjct 1063 GCCTCGCGCGCTGCGAGGGTGCGGCGCTGGCCTGCACGGACATGCACCGTGCCGTCAGAG 1004
Query 55778 CCGCGC-ACCGCGGTGATCGGCACGATGACGCCGTTCTCCTTGATGCTGGCGACGAACT- 55835
||||| | | ||| || ||| |||| |||||||| | || |||| | | |||||
Sbjct 1003 TCGCGCTATCCCGG-GA-CGGGACGAGGACGCCGTGCGTGCGGACGCTGTCCATGAACTC 946
Query 55836 -GCTTGGTCAGGCTC---GCCTCGGTGCGGACGTTGGCCTCCAGCACCAGCTCATTGGGG 55891
|| | |||| || ||||| || |||||||||| ||| | |||||| | |||
Sbjct 945 GGCCT--CCAGGATCAGGGCCTCAGTCCGGACGTTGGTCTCGATCACCAGAGTGGTCGGG 888
Query 55892 TCGACGTG 55899
|||| |||
Sbjct 887 TCGAGGTG 880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 222798267042402
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |