Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq16751 95.1 1e-14 seq12926 95.1 1e-14 seq8957 95.1 1e-14 seq105869 93.3 4e-14 seq11477 91.5 1e-13 seq13269 89.7 5e-13 seq23250 87.8 2e-12 seq72010 86.0 6e-12 seq7211 84.2 2e-11 seq58168 82.4 7e-11 >seq16751 Length=10463 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || || ||||| ||| | || || | ||| | || Sbjct 6748 AATGCAAATTTTTGTGAAGACCTTGACTGGTAAAACCATTACTTTGGAAGTTGAGAGCTC 6689 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | |||||| || ||| ||||| || || || || || || || Sbjct 6688 CGACACCATCGATAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGACCA 6629 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || | || | | ||||| || || ||||||| | | | | | |||||| || Sbjct 6628 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTTGAAGATGGTCGCACCCTAGCCGACTACAA 6569 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| ||||| || |||| ||||| || |||||||||| |||| Sbjct 6568 TATCCAAAAGGAATCCACCCTCCACCTGGTGCTCCGACTTAGAGGTGGAA 6519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || || ||||||||| | || || | ||| | || Sbjct 6976 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 6917 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| || | |||||| || ||| ||||| || || || || || || || Sbjct 6916 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGACCA 6857 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || | || | | |||||||||||| ||||||| | | | | |||||| || Sbjct 6856 GCAGAGGTTGATCTTTGCCGGCAAACAACTTGAAGATGGTCGCACACTTGCCGACTACAA 6797 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| ||||| || | || ||||| || | |||||||| |||| Sbjct 6796 TATCCAAAAGGAATCCACCCTTCACCTGGTGCTCCGGCTTAGAGGTGGAA 6747 >seq12926 Length=15191 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| |||||| | |||||| | || | || Sbjct 526 AAGATGCAGATCTTCGTGAAAACCCTAACCGGAAAAACCATCACCCTGGAGGTGGAGAGC 467 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||||||| || | ||||| ||||| ||||| ||||| || || || || Sbjct 466 TCCGACACCATAGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGAC 407 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || ||||| | || ||| |||||| | || || | | | | | || ||| ||| Sbjct 406 CAGCAGAGGCTCATCTTCGCCGGTAAACAATTGGAGGACGGTCGCACCCTCGCCGATTAT 347 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || ||||| ||| | ||| |||| |||| || | ||||| Sbjct 346 AACATTCAGAAGGAATCGACTCTGCATTTGGTGTTGAGGCTCCGTGGAGG 297 >seq8957 Length=24100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| ||||||||||| |||| ||| | || |||| | Sbjct 15505 ATGCAGATCTTTGTGAAAACCCTAACTGGAAAAACGATTACCTTGGAGGTAGAGAGCTCC 15446 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| |||||| ||||| || ||||| || || || || Sbjct 15445 GACACGATTGATAATGTCAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCGGACCAG 15386 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | || ||| || ||| | || || | | | | || || || ||| Sbjct 15385 CAGAGGCTAATCTTCGCCGGGAAGCAATTAGAGGACGGCCGCACCCTCGCTGATTACAAC 15326 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || |||||| |||| ||||| ||||| || | ||||| Sbjct 15325 ATTCAGAAGGAGTCTACTCTCCACCTGGTGCTGAGGCTCCGTGGAGG 15279 >seq105869 Length=645 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 120341 GTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGAAAAAATCGTTC 120400 ||||||||| |||| | ||||||||| || ||||||||||| || ||| ||||| || Sbjct 354 GTTCACGATTCCGTCTGAGGCAGCGAAGAAGGCGAGAACGTGGGAAATAAAGAATCGCTC 413 Query 120401 TTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 120460 | || |||| ||||||||||| | || |||||||| | |||||||| ||| | Sbjct 414 ATCGTCATTCAAGCGCTTGTTCCAATCATGAAGATCCTTGGATAGATCGATCTCCTCGGC 473 Query 120461 TTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 ||||| | | | || ||||||||| |||||||| Sbjct 474 AGTCCAGAAGGATGCCTCAGCCTTCTTGTACATTTGCCAGA 514 >seq11477 Length=17588 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| |||||| | |||||| | || | || Sbjct 516 AAGATGCAGATCTTCGTGAAAACCCTAACCGGAAAAACCATCACCCTGGAGGTGGAGAGC 457 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||||||| || | ||||| ||||| ||||| ||||| || || || || Sbjct 456 TCCGACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGAC 397 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || ||||| | || ||| ||||| | || || | | | | | || ||| ||| Sbjct 396 CAGCAGAGGCTCATCTTCGCCGGAAAACAGTTAGAGGACGGTCGCACCCTCGCCGATTAT 337 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || ||||| ||| | ||| |||| |||| || | ||||| Sbjct 336 AACATTCAGAAGGAATCGACTCTGCATTTGGTGTTGAGGCTCCGTGGAGG 287 >seq13269 Length=14915 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | |||||||| || | ||||| || | |||||| | || | || Sbjct 13893 AATGCAAATCTTTGTAAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTC 13952 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || || | || || ||| ||| || |||||||| || || || || || Sbjct 13953 TGATACAATTGACAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATTCCACCAGACCA 14012 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 ||| || || || | || || ||||| ||||| |||| || | | | || ||||||| Sbjct 14013 ACAGAGGCTGATATTCGCTGGAAAACAGCTCGAGGATGGCAGGA-CTTTGGCTGACTATA 14071 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||| || ||||| |||||| | ||| |||| || || ||| | ||||||| Sbjct 14072 ACATCCAGAAAGAGTCTACTCTTCATTTGGTTCTCAGGCTTCGTGGAGGAA 14122 >seq23250 Length=6169 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 ||||| || ||||| | ||||| ||||| | || || || | |||||| | || | Sbjct 5649 TCAAA-AAGATGCAGATCTTTGTGAAAACTCTGACCGGCAAGACCATCACCTTGGAGGTG 5707 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || |||||||||||| | || || |||||| || || || ||||| || Sbjct 5708 GAGAGCTCCGACACCATCGACAACGTGAAGGCCAAGATTTAGGATAAGGATGGGATTCCG 5767 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 || || || || || ||||| | || ||| |||||| | || || | | | | | || | Sbjct 5768 CCGGACCAGCAGAGGCTCATCTTCGCCGGGAAACAATTGGAGGACGGTCGTACCCTCTCC 5827 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || |||||||| ||||| || || ||||||| || || || || | ||||||| Sbjct 5828 GATTACAACATTCAGAAAGAGTCAACGCTCCATCTCGTGCTCAGGCTCCGTGGAGGAA 5885 >seq72010 Length=1221 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| | ||| ||| ||||| | |||| ||||||||| || ||||||||||| Sbjct 890 GCTCGAGCAAGTTCTCGTTTACGATACCATCGGAGGCAGCGAAGAAGGCGAGAACGTGAG 831 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | ||| | || || | |||||| || |||||||| |||| || |||||||| | Sbjct 830 AGATAAAGTAACGCTCATCATCGTTAAGACGGTTGTTCCAGTCGTGAAGATCCTTGGATA 771 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 |||| |||||| | ||||| | | | |||||||||||| |||||||| Sbjct 770 GATCGACCTCTTCAGCAGTCCAGAAGGATGCTTCTGCTTTCTTGTACATTTGCCAGA 714 >seq7211 Length=36427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/236 (68%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 ||||| || ||||| | ||||| ||||| | || || || | ||||| | || | Sbjct 7524 TCAAA-AAGATGCAGATCTTTGTGAAAACTCTGACCGGCAAGACCATCACGTTGGAGGTG 7582 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || |||||||||||| | || || |||||| || || |||||||| || Sbjct 7583 GAGAGCTCCGACACCATCGACAACGTGAAGGCCAAGATTTAGGATAAGGAAGGGATTCCG 7642 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 || || || || || ||||| | || ||| |||||| | || || | | | | | || | Sbjct 7643 CCGGACCAGCAGAGGCTCATCTTCGCCGGGAAACAATTGGAGGACGGTCGTACCCTCGCC 7702 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| ||||| || || ||||||| || || || || | ||||| Sbjct 7703 GATTACAACATTCAGAAAGAGTCAACGCTCCATCTCGTGCTCAGGCTCCGTGGAGG 7758 >seq58168 Length=1766 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 ||||| || ||||| | ||||| ||||| | || || || | |||||| | || | Sbjct 292 TCAAA-AAGATGCAGATCTTTGTGAAAACTCTGACAGGCAAGACCATCACCTTGGAGGTG 350 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 || |||||||||||| | || || |||||| || || |||||||| || Sbjct 351 GAGAGCTCCGACACCATCGACAACGTGAAGGCCAAGATTTAGGATAAGGAAGGGATTCCG 410 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 || || || || || ||||| | || ||| |||||| | || || | | | | | || | Sbjct 411 CCGGACCAGCAGAGGCTCATCTTCGCCGGGAAACAATTGGAGGACGGTCGTACCCTCGCC 470 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCT 26974 || || |||||||| ||||| || || ||||||| Sbjct 471 GATTACAACATTCAGAAAGAGTCAACGCTCCATCT 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477863099608080