Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_007497.1
Length=44856
Score E
Sequences producing significant alignments: (Bits) Value
seq86895 105 2e-18
>seq86895
Length=897
Score = 105 bits (116), Expect = 2e-18
Identities = 213/308 (69%), Gaps = 15/308 (5%)
Strand=Plus/Minus
Query 39263 CCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACGGATCG 39322
||||||||||||||||| || ||||||||||| ||||| ||||| || | ||||| |||
Sbjct 872 CCGCCGCCGACGCGCTTGGTGGTGTAGAACAGCACGTAGGGCTTGGCGGAATACGGGTCG 813
Query 39323 CGCAGCACGCGAACCCCGATGCGGTCGATGATCAGA--TACGTCTGCTGGAAGTCGCCGA 39380
|||||||| || | ||| ||||||| || |||| || | | |||| |||||||
Sbjct 812 CGCAGCACCCGCAGGCCGGTGCGGTC--CGACCAGAGGTAGCCCCGGCGGAAATCGCCGA 755
Query 39381 AGAGAATCGGCGTCGAG--TTC--GCCGCCACATCCGGCATGTCCGGCACCTCGGTAACC 39436
|| | || |||| | | || || | || ||||| || |||| || |||
Sbjct 754 AGGCGAGCG----CGAGGCTGCCGGCGGCGATGTCGGGCATCGCCTCGGCCTCCGTCACC 699
Query 39437 GGATAGCCCGCCAGCGTC-GCCGG-CTGCCCCGCTACGTACGACGGTTGCCAGAGAT-AG 39493
|| |||| ||| ||| || || | | ||| || || ||| ||||||||| ||
Sbjct 698 GGGAAGCCGAGCAGGGTCTGCAGGCCCGGTCCGAGGCGGTCGGCGGCAGCCAGAGATAAG 639
Query 39494 TTCCCTTGGCCGTCCTTCAGCTTCCGCACCTGACGCTGCGTGTTGCGGTTCATCGCGAAG 39553
|| || | | |||||| | ||| || | | | ||||||| ||| ||||| |||||
Sbjct 638 TTGCCCTCGTTGTCCTTGAACTTGCGGATCGCGCTCTGCGTGCGCCGGCTCATCACGAAG 579
Query 39554 CGGGCGTT 39561
| ||| ||
Sbjct 578 CCGGCATT 571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143190086711524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |