Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_007809.1 Length=59446 Score E Sequences producing significant alignments: (Bits) Value seq89734 122 3e-23 >seq89734 Length=855 Score = 122 bits (134), Expect = 3e-23 Identities = 271/396 (68%), Gaps = 23/396 (6%) Strand=Plus/Plus Query 34117 GGCGATCCGGGCCAGCTCCCGCCCGTGGGCGGCACCCCCTTCTTCA---AGAACAAGCCC 34173 ||||| |||| ||||| ||||| ||| ||||| | |||||||| || | ||||| Sbjct 282 GGCGACCCGGCGCAGCTGCCGCCGGTGCGCGGCGGCGGCTTCTTCACCGAGGCCGAGCCC 341 Query 34174 GACATCCTGCTCACGGAGATTCACCGCCAGGCCCAGGACAACCCGATCATCTGGATGTCC 34233 ||| | |||| || ||| | |||||||||||| ||||| |||||||| | | ||| | Sbjct 342 GACGTGATGCTGACCGAGGTCCACCGCCAGGCCAAGGACGACCCGATCGTGCGCATGGCG 401 Query 34234 AAGGAGGTCCGCGAGGGCCGCGTGCTCCGCCCCGGCGACTACGGTGCCAGCCGCGTGATT 34293 | | ||| ||||||||| || |||| | |||||| ||||| |||||||||||| | Sbjct 402 ATGACGGTGCGCGAGGGCGGCCGGCTCGCGCTCGGCGAGTACGGCGCCAGCCGCGTGGT- 460 Query 34294 CCCTATGGCCGCCTGCCACGCGAAGAACTCCGGGACATGGTACTGTCCACT--GACCAGC 34351 || ||||| |||| ||| || | | ||| | || ||| |||||| Sbjct 461 --CTCGCGCCGC--GCCA-TCGA------CCCGACCCAGGTGC--TCGACTGCGACCAGG 507 Query 34352 TCCTCGTTGGCAGGAACGCCACGAG-AATCACGAGCAACGGACGTGCCCGGGAACTCCTC 34410 | || || |||| |||| || | || | | |||||| || ||||| ||| | Sbjct 508 TGCTGGTGGGCATGAACAAGACCCGCCGTCTCTA-CAACGGGCGGCTGCGGGAGCTCGCC 566 Query 34411 GGGC-GGACGAACGCCCTGCCGCAGGAAGGTGACAAGCTGGTGTGCCTCCGCAACAACCA 34469 || | | || || | ||||| || || || |||||||| ||||| |||||| ||| Sbjct 567 GGCCACGTCG-ACCCGATGCCGGCGGTGGGCGAGAAGCTGGTCTGCCTGCGCAACGACCG 625 Query 34470 CGAGGTGGGCCTGTTCAACGGCCAGCTCTGGAAGGT 34505 | ||||||| |||||||| | ||||| ||| Sbjct 626 CACCAAGGGCCTGCTCAACGGCTCGACCTGGACGGT 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189804022298144