Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_009803.1 Length=84201 Score E Sequences producing significant alignments: (Bits) Value seq69607 122 5e-23 >seq69607 Length=1286 Score = 122 bits (134), Expect = 5e-23 Identities = 165/229 (72%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 14980 CGGGGTATAAAACTCGTCCTCCACCACGGAGTAGCGGGCCGAAATCTCGTTCACGCTCGC 15039 |||| | || ||||| | || | ||| ||||||||||||||| ||||| ||||| | Sbjct 857 CGGGATGTAGAACTCCTGGTCGAGCACCGAGTAGCGGGCCGAATATTCGTTGACGCTGGA 916 Query 15040 CGTGCGGTGGCGGAACCATTGGCGGGCCACAAAGATGGGAGCCTTGACGTGGAACTTGAA 15099 ||||||||||||| ||| || |||||||| ||||| || ||| ||||| | ||||| Sbjct 917 GGTGCGGTGGCGGATCCACTGCCGGGCCACGAAGATCGGCAGCTTCACGTGCAGCTTGAT 976 Query 15100 CTCCACCATCTCAAAGGGCGACCAATGCTCGTGCTTGAGCAGGTAGCGGATGAGTTTTTC 15159 | |||||| ||||||| ||||| |||| | |||||||||||| || Sbjct 977 CGAGCACATCTCGAAGGGCGTGGAATGCCAGTGCCGCATCAGGTAGCGGATCAGCCCCCT 1036 Query 15160 GTCATCCCTAACGGTCTTGGTGCCCTTGCCATAGGAGACCCTAGCCGCC 15208 ||| || || || ||||||| || ||| ||||| |||| || ||| Sbjct 1037 GTCCTCGCTGACCTGCTTGGTG-CCGCGCCGTAGGACACCCGCGCGGCC 1084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 268879918420698