Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_009803.1
Length=84201
Score E
Sequences producing significant alignments: (Bits) Value
seq69607 122 5e-23
>seq69607
Length=1286
Score = 122 bits (134), Expect = 5e-23
Identities = 165/229 (72%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 14980 CGGGGTATAAAACTCGTCCTCCACCACGGAGTAGCGGGCCGAAATCTCGTTCACGCTCGC 15039
|||| | || ||||| | || | ||| ||||||||||||||| ||||| ||||| |
Sbjct 857 CGGGATGTAGAACTCCTGGTCGAGCACCGAGTAGCGGGCCGAATATTCGTTGACGCTGGA 916
Query 15040 CGTGCGGTGGCGGAACCATTGGCGGGCCACAAAGATGGGAGCCTTGACGTGGAACTTGAA 15099
||||||||||||| ||| || |||||||| ||||| || ||| ||||| | |||||
Sbjct 917 GGTGCGGTGGCGGATCCACTGCCGGGCCACGAAGATCGGCAGCTTCACGTGCAGCTTGAT 976
Query 15100 CTCCACCATCTCAAAGGGCGACCAATGCTCGTGCTTGAGCAGGTAGCGGATGAGTTTTTC 15159
| |||||| ||||||| ||||| |||| | |||||||||||| ||
Sbjct 977 CGAGCACATCTCGAAGGGCGTGGAATGCCAGTGCCGCATCAGGTAGCGGATCAGCCCCCT 1036
Query 15160 GTCATCCCTAACGGTCTTGGTGCCCTTGCCATAGGAGACCCTAGCCGCC 15208
||| || || || ||||||| || ||| ||||| |||| || |||
Sbjct 1037 GTCCTCGCTGACCTGCTTGGTG-CCGCGCCGTAGGACACCCGCGCGGCC 1084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 268879918420698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |