Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_009993.2
Length=53746
Score E
Sequences producing significant alignments: (Bits) Value
seq79087 104 8e-18
seq72395 102 3e-17
seq95122 86.0 2e-12
seq99115 84.2 8e-12
>seq79087
Length=1043
Score = 104 bits (114), Expect = 8e-18
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 15209 CGAATCCGGCGGCAACTGGGCGATCAACACCGGCAACGGGTACTACGGCGGGTTGCAGTT 15268
||| ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||
Sbjct 753 CGAGTCCGGCGGCAACTGGTCGATCAACACCGGCAACGGCTACTACGGCGGGCTGCAGTT 694
Query 15269 CGACCAACCGACCTGGGACGCCTAC 15293
| ||| | ||||||| ||| |||
Sbjct 693 CAACCTGCAGACCTGGCGCGCGTAC 669
>seq72395
Length=1210
Score = 102 bits (112), Expect = 3e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 15189 TGGGATGCCATCGCGCAGGCCGAATCCGGCGGCAACTGGGCGATCAACACCGGCAACGGG 15248
|||||||| ||||||||| ||| ||| ||| ||||| ||||||||||||| ||||||
Sbjct 92 TGGGATGCGATCGCGCAGTGCGAGAGCGGGGGCGACTGGTCGATCAACACCGGGAACGGG 33
Query 15249 TACTACGGCGGGTTGCAGTTC 15269
|||||||||||||||||||||
Sbjct 32 TACTACGGCGGGTTGCAGTTC 12
>seq95122
Length=780
Score = 86.0 bits (94), Expect = 2e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 15209 CGAATCCGGCGGCAACTGGGCGATCAACACCGGCAACGGGTACTACGGCGGGTTGCAGTT 15268
||| || |||||||||||| ||| |||||||||||||||||||||||||| |||||||
Sbjct 345 CGAGTCGGGCGGCAACTGGAGCATCGACACCGGCAACGGGTACTACGGCGGGCTGCAGTT 404
Query 15269 CGACCAACCGACCTGGGACGCCTAC 15293
| || |||| ||| || |||||
Sbjct 405 CAGCCTCTCGACGTGGCACTCCTAC 429
>seq99115
Length=726
Score = 84.2 bits (92), Expect = 8e-12
Identities = 46/46 (100%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 25134 TGACTGGGGGTCAAGGGGTCGCAGGTTCAAATCCTGTCAGCCCGAC 25179
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 TGACTGGGGGTCAAGGGGTCGCAGGTTCAAATCCTGTCAGCCCGAC 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 171592957675544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |