Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq89734 125 3e-24 >seq89734 Length=855 Score = 125 bits (138), Expect = 3e-24 Identities = 136/180 (76%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 5087 CTGGGCGATCCGGGGCAGCTCCCGCCCGTGGGCGGCACCCCCTTCTTCA---AGAACAAG 5143 || ||||| |||| |||||| ||||| ||| ||||| | |||||||| || | || Sbjct 279 CTCGGCGACCCGGCGCAGCTGCCGCCGGTGCGCGGCGGCGGCTTCTTCACCGAGGCCGAG 338 Query 5144 CCCGACATCCTGCTCACGGAGATTCACCGCCAGGCCCAGGACAACCCGATCATCTGGATG 5203 |||||| | |||| || ||| | |||||||||||| ||||| |||||||| | | ||| Sbjct 339 CCCGACGTGATGCTGACCGAGGTCCACCGCCAGGCCAAGGACGACCCGATCGTGCGCATG 398 Query 5204 TCCAAGGAGGTCCGCGAGGGCCGCGTGCTCCGCCCCGGCGACTACGGGGCCAGCCGCGTG 5263 | | | ||| ||||||||| || |||| | |||||| ||||| |||||||||||| Sbjct 399 GCGATGACGGTGCGCGAGGGCGGCCGGCTCGCGCTCGGCGAGTACGGCGCCAGCCGCGTG 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187302397105250