Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_011216.1 Length=37635 Score E Sequences producing significant alignments: (Bits) Value seq95373 80.6 6e-11 >seq95373 Length=773 Score = 80.6 bits (88), Expect = 6e-11 Identities = 188/280 (67%), Gaps = 8/280 (3%) Strand=Plus/Plus Query 15457 CTCATGAACAAGTCGCAACTCATCGACGCCGTGGCGAAGAACGCCGAGCTGACGAAGGCC 15516 |||||||||||| | |||| |||| | | || || | | | | |||||| |||| | Sbjct 305 CTCATGAACAAGCAGGAACTTATCGCCACGGTCGCCGACACGTCGGGGCTGACCAAGGGC 364 Query 15517 CAGGCGGCTCAATCCGTCGAAGCCGTGCTGAACGCGATCCAGCTCGGCCTGCAGGAAGAC 15576 | || | |||||||| | ||| | |||| ||| | |||| || |||| Sbjct 365 GATGCCAGCCGCGCCGTCGAATCGGTGTTCGACGCCATCTCGG-CGGCGCTCAAGAAGGG 423 Query 15577 GG-CGACGTGGCGCTGTCGGGCTTCGGCACCTTTGCCGTGGCAGCGCGCAAAGCACGCAC 15635 || ||| ||| ||| ||||||||||| || |||||| | |||||| || || Sbjct 424 GGACGAGGTGCGTCTGGTCGGCTTCGGCACGTTCGCCGTGTCCAAGCGCAAGGCTTCGAC 483 Query 15636 CGGCCGCAATCCGGCGACGGGCGAATCGATCCAGATC---GCCGCCAGCAAGGCCGTGAA 15692 ||||||||| ||| || |||||| |||| ||| || | ||| || || || Sbjct 484 CGGCCGCAACCCGCGCACCGGCGAACCGATGAGCATCAAGGCGTCGAGCCAGCCC---AA 540 Query 15693 ATTCAAGCCCGGCAAGGCACTGAAAGACGCCGTGAACTGA 15732 |||||| | |||||| | ||||| ||| | |||||||| Sbjct 541 GTTCAAGGCGGGCAAGACCCTGAAGGACTCGATGAACTGA 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120119543265946