Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq109433 102 6e-17
>seq109433
Length=607
Score = 102 bits (112), Expect = 6e-17
Identities = 182/263 (69%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 111037 TCCGAAGACTTCGACGACGTGTTCAAGACTAACGTGTACGCGCTGTTCTGGATGTGCCGG 111096
||||| | |||||| | || |||||| ||||| |||||||||||||||||| ||
Sbjct 149 TCCGAGCAGTTCGACCAGACGTACAAGACGAACGTCTACGCGCTGTTCTGGATGGTCCAA 208
Query 111097 GAGGCGCTCAAGGGCATGCGCGCCGGGGACAGCATAATAACGACCGTTTCGGGCCAGGCC 111156
||||| || ||| | ||| ||| || ||||| || |||||| ||| |||||||
Sbjct 209 GAGGCCCTGAAGCACCTGCCCGCGGGCTCGAGCATCATCACGACCTCCTCGATCCAGGCC 268
Query 111157 AAAGACCCGTCGACGTTCCTCGTGGACTACGCGGCGTCCAAGGGCGCCGTGGCGACGTTC 111216
| |||| | ||| || |||||||| |||||| ||| | || |||
Sbjct 269 TACAGCCCGAGCCCCGGCCTGGTCGACTACGCCAGCACCAAGGCCGCGATCAACACCTTC 328
Query 111217 ACGAAAGGTCTGGCGCGCCAGGTAGCGTCGCGAGGG-ATAAGAGTCAATGGCGTAGCGCC 111275
| || | || || | ||||| ||| | | |||| || | ||||| | ||| |||||
Sbjct 329 AGCAAGGCCCTCGCCCAGCAGGTCGCG-CCCAAGGGCATCCGCGTCAACGTCGTGGCGCC 387
Query 111276 CGGACCGGTGTGGACACCGCTGC 111298
||| ||||| ||||| |||||||
Sbjct 388 CGGGCCGGTCTGGACGCCGCTGC 410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381151229619816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |