Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq10846 120 2e-22
seq124414 116 3e-21
seq58168 113 3e-20
seq16751 111 1e-19
seq3441 107 1e-18
seq23762 102 6e-17
seq8957 102 6e-17
seq23250 100 2e-16
seq7211 100 2e-16
seq13269 98.7 7e-16
seq93805 95.1 9e-15
seq11477 95.1 9e-15
seq1750 95.1 9e-15
seq1584 93.3 3e-14
seq12926 91.5 1e-13
seq3871 89.7 4e-13
>seq10846
Length=19378
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
|| |||||||||| | || || || ||||| || || ||||| ||||||||||| |||
Sbjct 11276 CCTCCTCGCAATCGCAGCACCAAGTGCAGGGTCGACTCCTTTTGAATGTTGTAATCAGCT 11335
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| |||| | ||||| || || |||||||| | |||| | ||||||||| |||
Sbjct 11336 AAG-GTTCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGTTGGTCCGGTGG 11394
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| || || ||||| || || ||| ||| | || |||||||| | || ||
Sbjct 11395 GATACCCTCTTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTATCAGAGCTCTCAAC 11454
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||||||||| || |||| || || ||||||||||||||
Sbjct 11455 CTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTAACAAAAATTTGCAT 11502
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||||||||| || || ||||| |||||||| ||| | || | ||||| | ||
Sbjct 11071 ATGAAGGGTAGACTCCTTCTGTATATTGTAATCTGCAAGAGTCCTTCCATCTTCAAGCTG 11130
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091
||||| || | || | | || ||||| ||| || ||||||||||| || ||
Sbjct 11131 CTTGCCTGCAAAAATAAGCCTTTGCTGGTCTGGTGGTATACCTTCCTTGTCTTGTATCTT 11190
Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151
||| || ||| | || |||||||| |||| || || ||||| |||||||| || |
Sbjct 11191 TGC-CTTCACATTGTCAATAGTATCTGAGCTTTCAACCTCCAAGGTTATGGTTTTCCCAG 11249
Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176
||| ||| || || ||||| |||||
Sbjct 11250 TCAAAGTCTTCACGAAAATCTGCAT 11274
>seq124414
Length=715
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || || |||||||| ||||| || || ||||| ||| ||| ||| | |||||
Sbjct 306 ACCAAGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCGGCAAGAGTTCGACCATCTTCC 365
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|||||||| |||||| | || | | || || || ||| ||||||||||||||
Sbjct 366 AATTGTTTACCAGCGAAAATGAGCCTTTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGG 425
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
||||| ||| ||| | || ||||||||| |||| || || | ||| ||||| ||
Sbjct 426 ATTTTCGCTTTCACATTGTCAATAGTATCGGAGCTTTCAACCTCAAGGGTGATGGTCTTT 485
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || |||||||| ||||| || |||||
Sbjct 486 CCAGTGAGAGTTTTCACAAAGATCTGCAT 514
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| ||||| || || || || ||||| || || ||| | | | |||||
Sbjct 78 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTACGACCATCTTCG 137
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| || | ||||| | ||||||||| ||| || || ||||||||
Sbjct 138 AGCTGCTTGCCTGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCCTTGTCCTGG 197
Query 15088 AT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
|| ||||| || ||| | || || ||||| |||| || || || || || |||||
Sbjct 198 ATCTTTGCCTTG-ACATTGTCAATGGTATCCGAGCTTTCCACCTCCAATGTTATTGTTTT 256
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||||||| ||| || |||||||||||||||
Sbjct 257 ACCTGTCAAAGTCTTAACAAAAATTTGCATA 287
>seq58168
Length=1766
Score = 113 bits (124), Expect = 3e-20
Identities = 159/222 (72%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 14960 ATCTTAAAACTAA-ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTC 15018
||||| || || | ||| || || || ||||| || |||||||||||| ||| | |
Sbjct 517 ATCTTGAATCTGAGATGGAGCGTTGACTCTTTCTGAATGTTGTAATCGGCGAGGGTACGA 458
Query 15019 GCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCC 15078
|||| || |||||||| || ||| | || | | ||| ||||| ||||| ||||||
Sbjct 457 CCGTCCTCCAATTGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGAATCCCTTCC 398
Query 15079 TTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTA 15138
|| || |||| ||| || || | || || || ||| | || || || |||||
Sbjct 397 TTATCCTAAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTG 338
Query 15139 ATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180
||||| || |||||||||||||| ||||| || ||||| |||
Sbjct 337 ATGGTCTTGCCTGTCAGAGTTTTCACAAAGATCTGCATCTTT 296
>seq16751
Length=10463
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCG-CT 15008
||||| ||||| | | || || || ||||| || || ||||| || ||||||||| ||
Sbjct 6293 CCACCACGCAAACGCAGCACCAAGTGCAGGGTTGACTCCTTTTGAATATTGTAATCGGCT 6352
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | || | ||||| || || |||||||| | |||| | ||||||||| |||
Sbjct 6353 AAGG-TCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGTGG 6411
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| || |||||||| || || ||| ||| | || |||||||| | | || ||
Sbjct 6412 GATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTATCGATAGTATCTGAACTCTCAAC 6471
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| ||||| || |||| || || ||||||||||||||
Sbjct 6472 CTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCAT 6519
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| ||||| || || ||||| || ||||| ||| || | | | ||||| | ||
Sbjct 6545 TGGAGGGTGGATTCCTTTTGGATATTGTAGTCGGCTAGGGTGCGACCATCTTCAAGCTGC 6604
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|||||||| | ||||| | ||| ||||| ||| || || |||||||| |||||||
Sbjct 6605 TTGCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGAATTTTG 6664
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| ||| | || || || ||| | || || || || |||||||||||||| |||
Sbjct 6665 GCTTTGACATTATCGATGGTGTCGGAGCTCTCAACTTCCAAAGTAATGGTTTTACCAGTC 6724
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
| || || ||||||||||||||
Sbjct 6725 AAGGTCTTCACAAAAATTTGCAT 6747
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|||||||| || || ||||| || ||||| ||| || | | | ||||| | ||||
Sbjct 6773 TGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGCAAGTGTGCGACCATCTTCAAGTTGT 6832
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||| || | ||||| | ||| ||||| ||| || || |||||||| |||||||
Sbjct 6833 TTGCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGAATTTTG 6892
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| || | || || || || | || || || || ||||||||||| || |||
Sbjct 6893 GCTTTGACGTTATCAATGGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTTTTTCCAGTC 6952
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
| || || ||||||||||||||
Sbjct 6953 AAGGTCTTCACAAAAATTTGCAT 6975
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||||||||| || || || || |||||||| ||| | || | ||||| | |||
Sbjct 6088 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGAGTCCTTCCATCTTCAAGTTG 6147
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| || || | || | | |||||||| ||| || ||||||||||| || ||
Sbjct 6148 CTTTCCTGCAAAGATAAGCCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGTATCTT 6207
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| ||| | || ||||| || |||| || || ||||| |||||||| || ||
Sbjct 6208 AGCCTTGACATTGTCAATAGTGTCTGAGCTTTCAACCTCCAAGGTTATGGTTTTTCCGGT 6267
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
|| ||| || |||||||| |||||
Sbjct 6268 CAAAGTCTTCACAAAAATCTGCAT 6291
>seq3441
Length=50379
Score = 107 bits (118), Expect = 1e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| ||||| || || || || ||||| || || ||| | | |||||||
Sbjct 14393 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTACGACCGTCTTCG 14452
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || ||||| || | ||||| | ||||||||| ||| || || ||||||||
Sbjct 14453 AGCTGCTTGCCCGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCCTTGTCCTGG 14512
Query 15088 AT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
|| |||||||| ||| | || || ||||| |||| || || || || || |||||
Sbjct 14513 ATCTTTGCTTTG-ACATTGTCAATGGTATCCGAGCTTTCGACCTCCAATGTTATTGTTTT 14571
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||||||| ||| || |||||||||||||||
Sbjct 14572 ACCTGTCAAAGTCTTAACAAAAATTTGCATA 14602
Score = 96.9 bits (106), Expect = 2e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| || || || ||||| ||||| ||||| ||| | | | | || || || ||
Sbjct 13943 TGAAGAGTTGACTCCTTTTGGATGTTATAATCTGCAAGAGTCCGCCCATCCTCCAACTGC 14002
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| ||||| | |||| | ||| |||||| |||||| || || ||||| ||| ||
Sbjct 14003 TTACCAGCAAAAATCAGCCTCTGCTGGTCGGGTGGAATGCCCTCTTTGTCCTGAATCTTA 14062
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|||||| | || || ||||| | |||| || || | || ||||||||||| |||
Sbjct 14063 GCTTTTACGTTGTCAATGGTATCAGAACTTTCCACCTCCAGAGTTATGGTTTTACCAGTC 14122
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
| || || |||||||| |||||
Sbjct 14123 AATGTCTTCACAAAAATCTGCAT 14145
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| |||| | | || || ||||| || || || ||||| || || |||||
Sbjct 14147 CCACCACGCAGACGAAGCACCAAGTGAAGTGTCGATTCCTTTTGGATATTATAATCAGCA 14206
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | | ||||| | || |||||||| |||||| | ||| ||||| ||
Sbjct 14207 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGGTCCGGAGGG 14266
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| || || ||||| || ||||| || ||| | || |||||||| | |||| ||
Sbjct 14267 ATCCCCTCTTTGTCTTGTATCTTTGCCTTG-ACATTATCAATAGTATCAGAACTTTCAAC 14325
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || || ||||| || |||| || || ||||||||||||||
Sbjct 14326 TTCCAATGTTATAGTTTTTCCAGTCAAGGTCTTCACAAAAATTTGCAT 14373
>seq23762
Length=5545
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|||| |||||||||||| || ||||| || |||||||| ||| | || | |||||
Sbjct 1089 ACTAGATGAAGGGTAGACTCCTTTTGGATATTGTAATCTGCAAGAGTCCTTCCATCTTCA 1030
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||| | || || | || | | |||||||| ||| || |||||||||||
Sbjct 1029 AGTTGCGTTCCTGCAAAGATAAGCCTTTGTTGGTCTAGTGGGATACCTTCCTTGTCTTGT 970
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| || ||| | || ||||| || |||| || || ||||| ||||||||
Sbjct 969 ATCTTGGCCTTGACATTGTCAATAGTGTCTGAGCTTTCAACCTCCAAGGTTATGGTTTTT 910
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| |||| ||| || |||||||| |||||
Sbjct 909 CCAGTCAAAGTCTTCACAAAAATCTGCAT 881
>seq8957
Length=24100
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || ||||| || || || ||||||||||| ||| | | |||| ||||||||
Sbjct 15303 TGGAGAGTAGACTCCTTCTGAATGTTGTAATCAGCGAGGGTGCGGCCGTCCTCTAATTGC 15362
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| || ||| | || | | ||| ||||| |||||| || |||||||| ||| |||
Sbjct 15363 TTCCCGGCGAAGATTAGCCTCTGCTGGTCCGGTGGAATCCCCTCCTTGTCTTGAATCTTG 15422
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || || || ||| | ||||| || |||||||| ||||| || ||
Sbjct 15423 GCCTTGACATTATCAATCGTGTCGGAGCTCTCTACCTCCAAGGTAATCGTTTTTCCAGTT 15482
Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177
|| ||||| ||||| || ||||||
Sbjct 15483 AGGGTTTTCACAAAGATCTGCATA 15506
Score = 100 bits (110), Expect = 2e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007
|||| || || | || | ||| | ||||| || || ||||| || || ||||| |||
Sbjct 15733 TGCCTCCGCGGAGTCGCAGAACGAGGTGAAGAGTGGACTCTTTCTGAATATTGTAGTCGG 15792
Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
|||| | | ||||||| ||||| || || ||| | ||||| ||||| || ||| |
Sbjct 15793 CGAGAGTACGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGATCGGGCG 15852
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||||||||| || ||| || || | || || || ||| | || |
Sbjct 15853 GGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCA 15912
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180
| || || || ||||| || || ||||||||||| || || || ||||| |||
Sbjct 15913 CCTCCAACGTGATGGTCTTGCCGGTCAGAGTTTTCACGAAGATCTGCATCTTT 15965
>seq23250
Length=6169
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| || || || ||||| || |||||||||||| ||| | | |||| || |||||
Sbjct 5860 ATGGAGCGTTGACTCTTTCTGAATGTTGTAATCGGAGAGGGTACGACCGTCCTCCAATTG 5801
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| || ||| | || | | ||| ||||| ||||| || ||||| || |||| ||
Sbjct 5800 TTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGAATCCCATCCTTATCCTAAATCTT 5741
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || || | || || || ||| | || || || ||||| ||||| || || ||
Sbjct 5740 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTGCCGGT 5681
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180
||||||||| ||||| || ||||| |||
Sbjct 5680 CAGAGTTTTCACAAAGATCTGCATCTTT 5653
>seq7211
Length=36427
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| || || || ||||| || |||||||||||| ||| | | |||| || |||||
Sbjct 7735 ATGGAGCGTTGACTCTTTCTGAATGTTGTAATCGGCGAGGGTACGACCGTCCTCCAATTG 7676
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| || ||| | || | | ||| ||||| ||||| |||||||| || |||| ||
Sbjct 7675 TTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTATCCTAAATCTT 7616
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || || | || || || ||| | || || || || || ||||| || || ||
Sbjct 7615 GGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAACGTGATGGTCTTGCCGGT 7556
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180
||||||||| ||||| || ||||| |||
Sbjct 7555 CAGAGTTTTCACAAAGATCTGCATCTTT 7528
>seq13269
Length=14915
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||| | | ||| || || ||||| || ||||| || |||||||||||
Sbjct 13436 CCACCTCTCAAACGAAGAACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATCAGCC 13377
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | ||| | || || || |||||||| || | |||| | ||| ||||| |||
Sbjct 13376 AAAGTTCGACCATCCTCCAACTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGG 13317
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||| |||||||| ||||| ||| ||| | ||||| ||||| | || ||
Sbjct 13316 ATTCCCTCCTTGTCCTGTATTTTTGCTTTGACATTATCTATTGTATCAGAGCTCTCGACC 13257
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || |||||||| || || || |||||
Sbjct 13256 TCGAGAGTTATGGTCTTTCCAGTGAGAGTTTTGACGAAGATCTGCAT 13210
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || ||||| || || || |||||||||||| | | ||| | || || | ||
Sbjct 13640 TGGAGTGTAGATTCCTTCTGAATGTTGTAATCGGCCAAAGTTCGGCCATCCTCAAGCTGC 13581
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | |||| | ||| || || ||||||||||| ||||| ||||||
Sbjct 13580 TTTCCAGCGAAAATCAGCCTCTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGAATTTTA 13521
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | ||||| ||||| | | || || || | |||||||| || || ||
Sbjct 13520 GCCTTCACATTATCTATTGTATCAGAACTCTCAACTTCAAGAGTAATGGTCTTTCCGGTG 13461
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|| || || |||||||| |||||
Sbjct 13460 AGTGTCTTGACAAAAATCTGCAT 13438
>seq93805
Length=797
Score = 95.1 bits (104), Expect = 9e-15
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008
|||||| || | ||| || || ||||| || || || || || || |||||||| |||
Sbjct 588 GCCACCACGGAGTCTCAACACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 529
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
||| ||| | || || ||||| ||||| ||| | ||||| ||||| |||||| |||
Sbjct 528 CAGAGTTCGGCCATCCTCCAATTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGG 469
Query 15069 AATTCCTTCCTTGTC 15083
||||||||||||||
Sbjct 468 GATTCCTTCCTTGTC 454
>seq11477
Length=17588
Score = 95.1 bits (104), Expect = 9e-15
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021
|| || || ||||| || || || || || || ||||| |||||| ||| | | ||
Sbjct 299 CTCAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCGGCGAGGGTGCGACCG 358
Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081
|| ||||| ||||| || ||| | || | | ||| ||||| ||||| |||||||||
Sbjct 359 TCCTCTAACTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTG 418
Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
|| || ||| || ||| | ||||| || ||| | || || || | ||| |||
Sbjct 419 TCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCCACCTCCAGGGTGATG 478
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181
||||| || || || ||||| || || || ||||| ||||
Sbjct 479 GTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATCTTTG 518
>seq1750
Length=74028
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||| | | ||| || || ||||| || ||||| || |||||||||||
Sbjct 61780 CCACCTCTCAAACGAAGAACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAATCAGCA 61721
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | || || || ||||| || || | |||| | ||| || || |||
Sbjct 61720 AGAGTACGACCATCCTCCAACTGTTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGTGGG 61661
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| ||||| ||| ||| | || || ||||| | || ||
Sbjct 61660 ATTCCTTCCTTGTCCTGTATTTTTGCTTTGACATTATCGATTGTATCAGAGCTCTCGACC 61601
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || |||||||| ||||| || |||||
Sbjct 61600 TCGAGAGTTATGGTCTTTCCAGTAAGAGTTTTGACAAAGATCTGCAT 61554
>seq1584
Length=77134
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||||||||| || || || || |||||||| ||| | || | ||||| | |||
Sbjct 61527 ATGAAGGGTAGACTCCTTCTGGATATTGTAATCTGCAAGAGTCCTTCCATCTTCAAGTTG 61586
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| || || | || | | |||||||| ||| || ||||||||||| || ||
Sbjct 61587 TTTTCCTGCAAAGATAACCCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGTATCTT 61646
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| ||| | || ||||| || |||| || || ||||| |||||||| || ||
Sbjct 61647 AGCCTTGACATTGTCAATAGTGTCTGAGCTTTCAACCTCCAAGGTTATGGTTTTTCCAGT 61706
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
|| ||| || |||||||| | |||
Sbjct 61707 CAAAGTCTTCACAAAAATCTACAT 61730
>seq12926
Length=15191
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021
|| || || ||||| || || || || || || ||||| |||||| ||| | | ||
Sbjct 309 CTCAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCGGCGAGGGTGCGACCG 368
Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081
|| || |||||||| || ||| | || | | ||| ||||| ||||| |||||||||
Sbjct 369 TCCTCCAATTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTG 428
Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
|| || ||| || || | ||||| || ||| | || || || | ||| |||
Sbjct 429 TCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCCACCTCCAGGGTGATG 488
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181
||||| || || || ||||| || || || ||||| ||||
Sbjct 489 GTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATCTTTG 528
>seq3871
Length=46552
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || | |||||||||||| || ||||| || |||||||| ||| | || | |||
Sbjct 27307 AACACCAGATGAAGGGTAGACTCCTTTTGGATATTGTAATCTACAAGAGTCCTTCCATCT 27248
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| | ||| || || | | || | | |||||||| ||| || |||||||||||
Sbjct 27247 TCAAGTTGCTTTCCTACAAAGATAAGCCTTTGTTGGTCTAGTGGGATACCTTCCTTGTCT 27188
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
|| || || ||| | || ||||| | |||| || || ||||| ||||||
Sbjct 27187 TGTATCTTAGCCTTGACATTGTCAATAGTGCCTGAGCTTTCAACCTCCAAGGTTATGGTT 27128
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || |||| ||| || |||||||| |||||
Sbjct 27127 TTTCCAGTCAAAGTCTTCACAAAAATCTGCAT 27096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356810124388865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |