Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq12926 150 2e-31
seq11477 141 8e-29
seq23250 132 4e-26
seq7211 132 4e-26
seq8957 116 3e-21
seq16751 113 4e-20
seq10846 113 4e-20
seq58168 107 2e-18
seq13269 100 3e-16
seq1750 100 3e-16
seq32675 98.7 9e-16
seq1213 95.1 1e-14
seq58530 86.0 6e-12
seq17950 86.0 6e-12
seq3441 86.0 6e-12
>seq12926
Length=15191
Score = 150 bits (166), Expect = 2e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||||||||| | |||||| || |||||||| || || |||||||||
Sbjct 294 ATACCTCCACGGAGCCTCAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCG 353
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | || ||||||||||| || ||| | || | | |||||||||||
Sbjct 354 GCGAGGGTGCGACCGTCCTCCAATTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGG 413
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || || || |||| || | |||| ||||||||| |||
Sbjct 414 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCTATGGTGTCGGAGCTCTC 472
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || | ||||| |||||||| ||||| || || || ||||||
Sbjct 473 CACCTCCAGGGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATC 524
>seq11477
Length=17588
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||||||||| | |||||| || |||||||| || || |||||||||
Sbjct 284 ATACCTCCACGGAGCCTCAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCG 343
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | || || || |||||||| ||| | || | | |||||||||||
Sbjct 344 GCGAGGGTGCGACCGTCCTCTAACTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGG 403
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| || || || || || |||| |||| ||||||||| |||
Sbjct 404 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCC 463
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || | ||||| |||||||| ||||| || || || ||||||
Sbjct 464 ACCTCCAGGGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATC 514
>seq23250
Length=6169
Score = 132 bits (146), Expect = 4e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| |||||||| | ||| ||||| |||||||| || || || || || ||||||
Sbjct 5886 ATTCCTCCACGGAGCCTGAGCACGAGATGGAGCGTTGACTCTTTCTGAATGTTGTAATCG 5827
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | || ||||||||||| || ||| | || | | ||||||||||||
Sbjct 5826 GAGAGGGTACGACCGTCCTCCAATTGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGC 5767
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || ||||| | ||| || || | || | || | ||||||||| |||
Sbjct 5766 GGAATCCCATCCTTATCCTAAATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTCTC 5708
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || | || | || |||||||| |||||||| ||||| || ||||||
Sbjct 5707 CACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTTTTCACAAAGATCTGCATC 5656
>seq7211
Length=36427
Score = 132 bits (146), Expect = 4e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||| | ||| ||||| |||||||| || || || || || ||||||
Sbjct 7761 ATACCTCCACGGAGCCTGAGCACGAGATGGAGCGTTGACTCTTTCTGAATGTTGTAATCG 7702
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | || ||||||||||| || ||| | || | | ||||||||||||
Sbjct 7701 GCGAGGGTACGACCGTCCTCCAATTGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGC 7642
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| ||||| | ||| || || | || | || | ||||||||| |||
Sbjct 7641 GGAATCCCTTCCTTATCCTAAATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTCTC 7583
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || | || | || |||||||| |||||||| ||||| || ||||||
Sbjct 7582 CACCTCCAACGTGATGGTCTTGCCGGTCAGAGTTTTCACAAAGATCTGCATC 7531
>seq8957
Length=24100
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||| | ||| ||||| || ||||| || || |||||||| ||||||
Sbjct 15504 ATACCTCCACGGAGCCTGAGCACGAGATGGAGAGTTGACTCTTTCTGGATATTGTAATCG 15563
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| || |||||||| || || ||| | || | || ||||||||||||
Sbjct 15564 GCGAGGGTACGGCCTTCCTCCAATTGCTTGCCGGCGAAGATGAGTCTCTGCTGGTCCGGC 15623
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| ||||| || || || || || || | || | || | ||||||||| |||
Sbjct 15624 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTATCGATGGTGTCGGAGCTCTC 15682
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | ||| || ||||| || ||||| || || || |||||
Sbjct 15683 CACCTCCAAGGTGATCGTCTTACCGGTCAGGGTTTTGACGAAGATCTGCAT 15733
Score = 109 bits (120), Expect = 5e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||||||||| | || || || || || || || || || || ||||| || |||
Sbjct 15732 ATGCCTCCGCGGAGTCGCAGAACGAGGTGAAGAGTGGACTCTTTCTGAATATTGTAGTCG 15791
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || || |||||||| ||||| ||| | |||||||| ||||| || |||
Sbjct 15792 GCGAGAGTACGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGATCGGGC 15851
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| |||||||| || ||||| || || || | || | || | ||||||||| |||
Sbjct 15852 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTCTC 15910
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || | || | || |||||||| |||||||| || || || ||||||
Sbjct 15911 CACCTCCAACGTGATGGTCTTGCCGGTCAGAGTTTTCACGAAGATCTGCATC 15962
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||||| ||| || || || || || ||||| || || || |||||
Sbjct 15276 ATACCTCCACGGAGCCTCAGCACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCA 15335
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| || || ||||| || || ||| | || | | |||||||||||
Sbjct 15336 GCGAGGGTGCGGCCGTCCTCTAATTGCTTCCCGGCGAAGATTAGCCTCTGCTGGTCCGGT 15395
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || || || |||||||| || |||| || | |||||||| |||
Sbjct 15396 GGAATCCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATCGTGTCGGAGCTCTCT 15455
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| |||||| || ||||| ||||| ||||| || |||||
Sbjct 15456 ACCTCCAAGGTAATCGTTTTTCCAGTTAGGGTTTTCACAAAGATCTGCAT 15505
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || |||||||| || |||||||| || || | ||| |||
Sbjct 15069 ACAAGGTGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCGAGAGTCCTCCCATCCTCC 15128
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
||||| || || ||| | || | | ||||| ||||| ||||| || || |||||||||
Sbjct 15129 AATTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTATCTTGA 15188
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || || | || | || ||||| ||| || || ||||||| ||| ||
Sbjct 15189 ATCTTCGCCTTCACATTATCGATCGTATCGGAGCTCTCCACCTCCAGAGTAATCGTCTTC 15248
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| || || || || |||||
Sbjct 15249 CCCGTCAGAGTCTTCACGAATATCTGCAT 15277
>seq16751
Length=10463
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | |||| | ||| || || || || ||||||||||||||||| || |||
Sbjct 6746 ATTCCACCTCTAAGCCGGAGCACCAGGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCG 6805
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | |||||| || || | ||||| | |||||||| ||
Sbjct 6806 GCAAGTGTGCGACCATCTTCAAGTTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGT 6865
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || ||||||||||| ||||| || | || | |||||| || |||
Sbjct 6866 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGA-CGTTATCAATGGTGTCAGAGCTCTC 6924
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||||| ||||| || || | || || ||||||||||||||
Sbjct 6925 AACTTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTCACAAAAATTTGCAT 6975
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || || || || ||||||||||||||||| || ||| | ||| | ||| ||
Sbjct 6538 CACCAGGTGGAGGGTGGATTCCTTTTGGATATTGTAGTCGGCTAGGGTGCGACCATCTTC 6597
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
| || || || || | ||||| | |||||||| || || || || || || |||||
Sbjct 6598 AAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTG 6657
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|||||| ||||| || | ||||||||| ||| ||||| | ||||| |||||
Sbjct 6658 AATTTTGGCTTTGACATTATCGATGGTGTCGGAGCTCTCAACTTCCAAAGTAATGGTTTT 6717
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || || ||||||||||||||
Sbjct 6718 ACCAGTCAAGGTCTTCACAAAAATTTGCAT 6747
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || | | || ||| | ||||| ||||| |||||||| ||||| ||||||
Sbjct 6290 ATTCCACCACGCAAACGCAGCACCAAGTGCAGGGTTGACTCCTTTTGAATATTGTAATCG 6349
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| || || || || | |||| | || ||||| ||
Sbjct 6350 GCTAAGGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGT 6409
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || || || ||||| || || ||| | || | || || ||| |||
Sbjct 6410 GGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTATCGATAGTATCTGAACTCTCA 6469
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||||| |||||||| || | || || ||||||||||||||
Sbjct 6470 ACCTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTGCAT 6519
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/233 (68%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||||| | ||| || || || || |||||||||||||| || || |
Sbjct 6974 ATTCCACCTCGGAGCCGGAGCACCAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAGT-- 7031
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| || | || || || | || ||||| || | ||||| | |||||||| |
Sbjct 7032 CTGCAAGTGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTG 7091
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || || ||||| || ||||| || || ||||| || | |||||| || |
Sbjct 7092 GTGGGATACCTTCCTTGTCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTTT 7151
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || || | || ||||| || || || || ||||| || ||||||
Sbjct 7152 CCACCTCAAGGGTGATGGTCTTGCCAGTGAGTGTCTTAACAAAGATCTGCATC 7204
>seq10846
Length=19378
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | |||| | ||| || || || || |||||||||||||||||||| |||
Sbjct 11501 ATTCCACCTCTAAGCCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATATTATAGTCG 11560
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | || || || || | ||||| | ||||| |||||
Sbjct 11561 GCAAGGGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGT 11620
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || ||||||||||| ||||| || | || | |||||| || |||
Sbjct 11621 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGA-CGTTATCAATGGTGTCAGAGCTCTC 11679
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||||| ||||| || || | || || ||||||||||||||
Sbjct 11680 AACTTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTCACAAAAATTTGCAT 11730
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|||||||| || | | || ||| | ||||| || || |||||||| || || |||||
Sbjct 11273 ATTCCTCCTCGCAATCGCAGCACCAAGTGCAGGGTCGACTCCTTTTGAATGTTGTAATCA 11332
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
||| | |||| | ||| ||||| || || || || | |||| | || ||||||||
Sbjct 11333 GCTAA-GGTTCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGTTGGTCCGG 11391
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289
|| || || ||||| ||||| || || ||||| || | || || || |||
Sbjct 11392 TGGGATACCCTCTTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTATCAGAGCTCTC 11451
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||||| ||||| || || | || || ||||||||||||||
Sbjct 11452 AACCTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTAACAAAAATTTGCAT 11502
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | || || || || ||||||||||| ||||| |||
Sbjct 11957 ATACCACCACGGAGGCGGAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAGTCG 12016
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||| || || || | ||||| | ||||||||| ||
Sbjct 12017 GCCAAAGTGCGACCATCTTCGAGTTGCTTACCAGCAAAGATCAACCTTTGCTGGTCTGGT 12076
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || || || ||||| || || ||||| || | ||||| || |||
Sbjct 12077 GGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTGTCTGAGCTTTCG 12136
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || | || |||||||| ||||| || ||||| || ||||||
Sbjct 12137 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTAACAAAGATCTGCATC 12187
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||||| | ||| || || || || |||||||||||||| || || ||
Sbjct 11729 ATTCCACCTCGGAGCCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCC 11788
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | || || || || | ||||| | |||||||| ||
Sbjct 11789 GCAAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGT 11848
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || || || || ||||| || || ||| | |||| ||||| || ||
Sbjct 11849 GGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTATCTATAGTGTCTGAGCTTTCA 11908
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||| | || || || || || ||||| ||||| ||||||||
Sbjct 11909 ACTTCCAAAGTTATGGTCTTCCCAGTAAGGGTTTTAACAAAGATTTGCAT 11958
>seq58168
Length=1766
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194
||||| |||||||| || || || || || |||||| || ||| | || ||||||
Sbjct 505 AGATGGAGCGTTGACTCTTTCTGAATGTTGTAATCGGCGAGGGTACGACCGTCCTCCAAT 446
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
||||| || ||| | || | | ||||||||||||||||| ||||| ||||| | |||
Sbjct 445 TGTTTCCCGGCGAAGATGAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTATCCTAAATC 386
Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313
|| || | || | || | ||||||||| ||| || || | || | || |||||
Sbjct 385 TTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTGCC 327
Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| |||||||| ||||| || ||||||
Sbjct 326 TGTCAGAGTTTTCACAAAGATCTGCATC 299
>seq13269
Length=14915
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| || ||||| | || | ||| || || || || || ||||| ||||| ||
Sbjct 14123 ATTCCTCCACGAAGCCTGAGAACCAAATGAAGAGTAGACTCTTTCTGGATGTTATAGTCA 14064
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | |||||||| ||| |||||| | || ||||| ||
Sbjct 14063 GCCAAAGTCCTGCCATCCTCGAGCTGTTTTCCAGCGAATATCAGCCTCTGTTGGTCTGGT 14004
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| ||||||||||| ||||||||| || | || | || || || ||||
Sbjct 14003 GGAATACCTTCTTTATCCTGAATTTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCG 13944
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | || ||||| || || || |||||||| ||||||||
Sbjct 13943 ACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTTACAAAGATTTGCAT 13894
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || ||||||||||| || ||||| ||||| | || ||| ||
Sbjct 14330 ACAAGATGGAGTGTTGATTCCTTCTGAATATTGTAATCAGCCAGAGTGCGGCCATCCTCA 14271
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||||||||| || | || | | ||||| ||||| ||||| ||||| |||||||||
Sbjct 14270 AGTTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTATCTTGA 14211
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| ||| ||| | |||| ||| || || ||| || || || || | || ||
Sbjct 14210 ATCTTTGCTTTAACATTATCTATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTT 14151
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| || |||||||| |||||
Sbjct 14150 CCAGTCAGAGTCTTGACAAAAATCTGCAT 14122
>seq1750
Length=74028
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||| || || ||||||||| | ||| ||| ||
Sbjct 61990 ACAAGGTGGAGTGTAGACTCCTTCTGAATGTTATAATCGGCCAGAGTTCGGCCATCCTCA 61931
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| ||||| || | ||||| | ||||| || || |||||||||||||| || |||
Sbjct 61930 AGTTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGA 61871
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
||||| || | |||| ||| |||||| ||| ||||| ||||||| || ||
Sbjct 61870 ATTTTCGCCTTCACATTATCTATGGTATCGGAACTCTCAACTTCAAGAGTAATGGTCTTC 61811
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || || || ||||| ||||||
Sbjct 61810 CCAGTGAGTGTCTTGACGAAAATCTGCATC 61781
>seq32675
Length=3033
Score = 98.7 bits (108), Expect = 9e-16
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| |||||||||||||| || || |||||||| || || ||||| || ||||||
Sbjct 2909 ATGCCTCCACGGAGCCTCAACACGAGGTGAAGCGTTGACTCTTTCTGGATGTTGTAATCG 2850
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | || ||||||||||| || ||| | || | | |||| ||||||
Sbjct 2849 GCGAGGGTACGACCGTCCTCCAATTGTTTACCAGCGAAGATGAGCCTCTGCTAGTCCGGG 2790
Query 45231 GGAATGCCTTCTTTATC 45247
||||||||||| || ||
Sbjct 2789 GGAATGCCTTCCTTGTC 2773
>seq1213
Length=84466
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| |||||||| | | ||| || || || || || ||||| ||||| || || |||
Sbjct 57249 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 57190
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| ||| |||| || ||||| ||| | || | || ||||||||||||||
Sbjct 57189 AGGGTTCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 57130
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || || | || | |||||| || ||||||||
Sbjct 57129 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATGGTGTCTGAGGACTCGACC 57070
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | || ||||| || || || || || || || |||||
Sbjct 57069 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 57023
>seq58530
Length=1747
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| ||||| || | | || || || || || || |||||||| || |||||||| |
Sbjct 315 CCACCGCGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCG 256
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || | ||| |||||||| || || || | |||| || ||||| ||||| ||
Sbjct 255 AGAGTCCTCCCATCCTCCAATTGCTTCCCAGCAAAGATCAGTCTCTGCTGATCCGGAGGG 196
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || ||||||||||| || || | || | || || ||| ||| ||
Sbjct 195 ATTCCCTCCTTATCTTGAATCTTCGCCTTCACATTGTCGATCGTATCAGAACTCTCCACC 136
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||||| ||| || || || ||||| || || || || |||||
Sbjct 135 TCCAGAGTAATCGTCTTCCCAGTCAGAGTCTTCACGAATATCTGCAT 89
>seq17950
Length=9621
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| | |||||||| || || || || || || ||||| || || || ||||||
Sbjct 2449 ATACCTCCACAGAGCCTCAGCAACAGGTGAAGGGTAGACTCCTTGTGAATGTTGTAATCG 2508
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | || || || || ||||| ||| | || | | ||||||||||||
Sbjct 2509 GCGAGGGTGTGGCTGTCCTCTAACTGCTTTCCGGCGAAGATTAGCCTCTGCTGGTCCGGC 2568
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||| || || || ||||| || || |||| || | ||||||| |||
Sbjct 2569 AGAATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCATGTCGGAGCTCTCT 2628
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | ||| || || ||||| ||||| ||||| || |||||
Sbjct 2629 ACCTCCAAGGTGATCGTCTTCCCAGTTAGGGTTTTCACAAAGATCTGCAT 2678
>seq3441
Length=50379
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || ||||| ||||||||||| |||||||| | || ||| |||
Sbjct 13937 ACAAGGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGCAAGAGTCCGCCCATCCTCC 13996
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
|| || || || || | |||| | |||||||| || |||||||| ||||| || |||
Sbjct 13997 AACTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCGGGTGGAATGCCCTCTTTGTCCTGA 14056
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || ||| | || | || | ||| || ||| || || || ||||| | |||||
Sbjct 14057 ATCTTAGCTTTTA-CGTTGTCAATGGTATCAGAACTTTCCACCTCCAGAGTTATGGTTTT 14115
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || | || || |||||||| ||||||
Sbjct 14116 ACCAGTCAATGTCTTCACAAAAATCTGCATC 14146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451248416806440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |