Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq8420 129 7e-25
seq8957 127 2e-24
seq7667 122 1e-22
seq16751 113 5e-20
seq1213 113 5e-20
seq124414 104 3e-17
seq11477 104 3e-17
seq10846 104 3e-17
seq9422 104 3e-17
seq12926 102 9e-17
seq3441 98.7 1e-15
seq64253 96.9 4e-15
seq93805 95.1 1e-14
seq1750 91.5 2e-13
seq104979 87.8 2e-12
seq19149 84.2 2e-11
seq13269 82.4 9e-11
>seq8420
Length=24920
Score = 129 bits (142), Expect = 7e-25
Identities = 148/195 (76%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||||| || |||||| |||| ||||||||||| ||||||||
Sbjct 248 TCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAG 189
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| | ||||||||| | || | || |||||||||| ||| || ||| | |||
Sbjct 188 ATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTCA-CGTT 130
Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | | ||||| |||| || || |||| |||||||||||||| || || || ||
Sbjct 129 GTCGATGGTGTCAGAGCTC---TCGACCTCCAAGGTGATGGTTTTGCCAGTGAGGGTCTT 73
Query 46579 AACAAAGATTTGCAT 46593
|||||||| |||||
Sbjct 72 GACAAAGATCTGCAT 58
>seq8957
Length=24100
Score = 127 bits (140), Expect = 2e-24
Identities = 150/199 (75%), Gaps = 8/199 (4%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || || ||||||||||||| ||||| || |||| || | ||||| ||||||||
Sbjct 15770 CTCTTTCTGAATATTGTAGTCGGCGAGAGTACGGCCGTCTTCCAATTGCTTTCCGGCGAA 15829
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| |||||||| |||| ||| | || |||||||| |||||| ||| | |||
Sbjct 15830 GATCAATCGCTGCTGATCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCA-CGT 15888
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||| |||| ||||| |||| ||||||||| ||||| ||||| ||||
Sbjct 15889 TGTCGATGGTGTCGGAGCTC---TCCACCTCCAACGTGATGGTCTTGCCGGTCAGAGTTT 15945
Query 46578 TAACAAAGATTTGCATTTT 46596
| || ||||| ||||| ||
Sbjct 15946 TCACGAAGATCTGCATCTT 15964
Score = 93.3 bits (102), Expect = 5e-14
Identities = 149/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| ||||| | || ||| || ||||||||||| |||| || || || | || ||
Sbjct 15524 CACGAGATGGAGAGTTGACTCTTTCTGGATATTGTAATCGGCGAGGGTACGGCCTTCCTC 15583
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
| |||||||||||||| || | | ||||||||| | ||| | | |||||||||
Sbjct 15584 CAATTGCTTGCCGGCGAAGATGAGTCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTG 15643
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
|||||| ||| | | | | ||||| |||| ||||| |||| ||||| ||
Sbjct 15644 GATCTTGGCCTTCACGTTATCGATGGTGTCGGAGCTC---TCCACCTCCAAGGTGATCGT 15700
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || ||||| ||||| || ||||| |||||
Sbjct 15701 CTTACCGGTCAGGGTTTTGACGAAGATCTGCAT 15733
>seq7667
Length=27334
Score = 122 bits (134), Expect = 1e-22
Identities = 157/213 (74%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | || || ||||| ||||| |||||||||| || ||||| |||| |||
Sbjct 27255 ACGAGATGGAGGGTGCTTTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 27196
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| ||||| |||||||| |||| | |||||||| | || | | ||||||||| |
Sbjct 27195 AGTTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGG 27136
Query 46505 ATCTTCTTCTTGAGCGTCGCC-ACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
||||| ||||| ||| | | | ||||| |||| || || || | ||||||||
Sbjct 27135 ATCTTGGCCTTGA-CGTTGTCGATGGTGTCTGAGCTC---TCGACCTCGAGAGTGATGGT 27080
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| ||||| ||||| || |||||||||||
Sbjct 27079 CTTGCCGGTCAGGGTTTTCACGAAGATTTGCAT 27047
>seq16751
Length=10463
Score = 113 bits (124), Expect = 5e-20
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| |||||||| | || ||||| |||| ||||||||||| ||||| ||
Sbjct 7013 TCCTTTTGGATGTTGTAGTCTGCAAGTGTGCGACCGTCTTCGAGCTGCTTTCCGGCAAAG 7072
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| | ||||||||| | || | | |||||||| |||||| |||| |
Sbjct 7073 ATCAACCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGGATCTTAGCTTTGACATTG 7132
Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579
| | ||||| ||| |||||| || | |||||||| ||||| || || || |||
Sbjct 7133 TCAATGGTGTCTGAGCT---TTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGTGTCTTA 7189
Query 46580 ACAAAGATTTGCAT 46593
|||||||| |||||
Sbjct 7190 ACAAAGATCTGCAT 7203
Score = 107 bits (118), Expect = 2e-18
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | || | |||||| || | || |||||||||||||||||||||| |
Sbjct 6521 CCACCTCTAAGTCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATATTGTAGTCGGCT 6580
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || ||||||||||| || || ||||| | ||||||||| | ||
Sbjct 6581 AGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 6640
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||||||||| || || |||| | | | ||||| |||| ||
Sbjct 6641 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTATCGATGGTGTCGGAGCTC---TCA 6697
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| |||| || |||||||| || |||| || || ||||| |||||||||
Sbjct 6698 ACTTCCAAAGTAATGGTTTTACCAGTCAAGGTCTTCACAAAAATTTGCATT 6748
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | || | |||||| || | || ||||||||||||||||||||||
Sbjct 6749 CCACCTCTAAGCCGGAGCACCAGGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGCA 6808
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || || || |||||||| || ||||| | ||||||||| | ||
Sbjct 6809 AGTGTGCGACCATCTTCAAGTTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGG 6868
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||||||||| || || |||| | | | ||||| |||| ||
Sbjct 6869 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTATCAATGGTGTCAGAGCTC---TCA 6925
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| |||| || |||||||| || |||| || || ||||| |||||||||
Sbjct 6926 ACTTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTCACAAAAATTTGCATT 6976
>seq1213
Length=84466
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | || |||||| ||||| |||||||||| ||| || || | || ||
Sbjct 57232 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCATCCTC 57173
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||| |||||||| || | ||||||||||| | ||| | | ||||||||
Sbjct 57172 CAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCTTG 57113
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||| | | | | ||||| || || || |||| |||||||| ||
Sbjct 57112 GATCTTGGCCTTCACATTGTCGATGGTGTCTGAGGACTCGACCTCCAGGGTGATGGTCTT 57053
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||||||| || || || ||||| |||||
Sbjct 57052 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 57023
>seq124414
Length=715
Score = 104 bits (114), Expect = 3e-17
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||| | || |||||| ||||| || ||||| | ||||| || |
Sbjct 71 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTACGACC 130
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| || || ||||| | ||| ||||| | || | | ||||||
Sbjct 131 ATCTTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCCTT 190
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554
|||| |||||| ||||| | | | || || ||| |||||| |||| ||
Sbjct 191 GTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCCGAGCT---TTCCACCTCCAATGT 247
Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || |||| || |||||||| ||||||||
Sbjct 248 TATTGTTTTACCTGTCAAAGTCTTAACAAAAATTTGCAT 286
>seq11477
Length=17588
Score = 104 bits (114), Expect = 3e-17
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||||| ||||| || ||||| || || || || |||| || ||||| ||||
Sbjct 301 CAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCGGCGAGGGTGCGACCGTC 360
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | ||| || |||||||| || | | ||||||||| | || | || ||||||||
Sbjct 361 CTCTAACTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTC 420
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCCACCGTGAT 46557
| |||||| ||||| | | | |||||| ||| ||||| |||| |||||
Sbjct 421 CTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTC---TCCACCTCCAGGGTGAT 477
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|||||| || || || ||||| || ||||| ||||| ||
Sbjct 478 GGTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 516
>seq10846
Length=19378
Score = 104 bits (114), Expect = 3e-17
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| |||||||| | || ||||| | || || ||||||||||| || ||
Sbjct 11768 TCCTTTTGGATGTTGTAGTCCGCAAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAG 11827
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| | ||||||||| | || | | ||||||||| |||||| || | |
Sbjct 11828 ATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTA 11887
Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579
| | ||||| ||| ||| || |||| || ||||| || || || || ||||||
Sbjct 11888 TCTATAGTGTCTGAGCT---TTCAACTTCCAAAGTTATGGTCTTCCCAGTAAGGGTTTTA 11944
Query 46580 ACAAAGATTTGCAT 46593
||||||||||||||
Sbjct 11945 ACAAAGATTTGCAT 11958
Score = 102 bits (112), Expect = 9e-17
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| || | ||| |||||||||||| || ||||||| | |||||| | || ||
Sbjct 11977 CACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAGTCGGCCAAAGTGCGACCATCTTC 12036
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||| ||||| || || || ||||| | |||||||| | || | | |||||||||
Sbjct 12037 GAGTTGCTTACCAGCAAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCCTTGTCTTG 12096
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
|||||| |||| | | | ||||| ||| ||| || || | ||||||||
Sbjct 12097 GATCTTAGCTTTGACATTATCAATAGTGTCTGAGCT---TTCGACCTCGAGGGTGATGGT 12153
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| ||||| || ||||||||||| |||||
Sbjct 12154 CTTGCCGGTCAGAGTCTTAACAAAGATCTGCAT 12186
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | || | |||||| || | || |||||||||||||| |||||||
Sbjct 11504 CCACCTCTAAGCCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATATTATAGTCGGCA 11563
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || |||||||||||||| || ||||| | |||||| || | ||
Sbjct 11564 AGGGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCCGGTGGG 11623
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||||||||| || || |||| | | | ||||| |||| ||
Sbjct 11624 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTATCAATGGTGTCAGAGCTC---TCA 11680
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| |||| || |||||||| || |||| || || ||||| |||||||||
Sbjct 11681 ACTTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTCACAAAAATTTGCATT 11731
>seq9422
Length=22427
Score = 104 bits (114), Expect = 3e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||||| | || || | || |||||||| || ||||||||
Sbjct 11876 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGGCCATCCTCGAGCTGTTTTCCGGCGAA 11935
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||||||||| ||||| | || | | ||||||||| |||||| ||||| |
Sbjct 11936 GATCAAGCGCTGTTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATT 11995
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || || || || | || ||||| || ||||| || ||||| ||
Sbjct 11996 GTCGATGGTGTCTGAGGACTCAACCTCAAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 12055
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 12056 GAAGATCTGCAT 12067
>seq12926
Length=15191
Score = 102 bits (112), Expect = 9e-17
Identities = 157/220 (71%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||||| ||||| || ||||| || || || || |||| || ||||| ||||
Sbjct 311 CAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCGGCGAGGGTGCGACCGTC 370
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | || || |||||||| || | | ||||||||| | || | || ||||||||
Sbjct 371 CTCCAATTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTC 430
Query 46501 CATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCG---CTCGATTCCACATCCACCGTGA 46556
| |||||| ||||| ||| | | | |||||| ||| ||||| |||| ||||
Sbjct 431 CTGGATCTTGGCCTTGA-CGTTGTCTATGGTGTCGGAGCTC---TCCACCTCCAGGGTGA 486
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
||||||| || || || ||||| || ||||| ||||| ||
Sbjct 487 TGGTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 526
>seq3441
Length=50379
Score = 98.7 bits (108), Expect = 1e-15
Identities = 154/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||| | || |||||| ||||| || ||||| | ||||| || |
Sbjct 14386 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTACGACC 14445
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| |||||||||||||| || || ||||| | ||| ||||| | || | | ||||||
Sbjct 14446 GTCTTCGAGCTGCTTGCCCGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCCTT 14505
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554
|||| |||||| |||| | | | || || ||| ||| || |||| ||
Sbjct 14506 GTCCTGGATCTTTGCTTTGACATTGTCAATGGTATCCGAGCT---TTCGACCTCCAATGT 14562
Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || |||| || |||||||| ||||||||
Sbjct 14563 TATTGTTTTACCTGTCAAAGTCTTAACAAAAATTTGCAT 14601
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|||||||||||||| || || | ||||||||| | || || ||||||||||| || |||
Sbjct 14183 TCCTTTTGGATATTATAATCAGCAAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAT 14242
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| | ||||||||| | || | | ||| ||||| ||||| ||||| |
Sbjct 14243 ATCAGCCTCTGCTGGTCCGGAGGGATCCCCTCTTTGTCTTGTATCTTTGCCTTGACATTA 14302
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | || || ||| || |||| || || ||||| || |||| || || |||
Sbjct 14303 TCAATAGTATCAGAACTTTCAACTTCCAATGTTATAGTTTTTCCAGTCAAGGTCTTCACA 14362
Query 46583 AAGATTTGCATT 46594
|| |||||||||
Sbjct 14363 AAAATTTGCATT 14374
>seq64253
Length=1480
Score = 96.9 bits (106), Expect = 4e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|||||||| | ||||||||||| ||||| || ||||| || || ||||||||||| ||
Sbjct 1364 CCTCCTCTAAGACGCAACACCAAGTGCAAGGTGCTCTCTTTCTGAATATTGTAGTCAGAA 1423
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|| || || |||| || | ||||||||| ||||| |||| | ||||||||
Sbjct 1424 AGCGTACGTCCGTCTTCCAACTGCTTGCCAGCGAAAATCAGTCTTTGCTGGTC 1476
>seq93805
Length=797
Score = 95.1 bits (104), Expect = 1e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|||||||| ||||| || |||||| || || ||||||||||| ||||| || | ||
Sbjct 573 CAACACCAAATGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCATC 514
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | |||||||||||||| ||||| ||||||||||||| || | | ||||||||
Sbjct 513 CTCCAATTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATTCCTTCCTTGTC 454
>seq1750
Length=74028
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||||| || |||||||| |||||||||||||| | || ||||| | || ||
Sbjct 62902 ACAAGATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCTGCAAGTGTGCGACCATCCTCC 62843
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || | | |||||| || | || | | ||||||||||
Sbjct 62842 AGCTGCTTTCCTGCAAAGATGAGCCTCTGCTGATCAGGTGGGATTCCCTCCTTGTCCTGA 62783
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561
||||| ||| | | | | || || |||| ||||| || | ||||| ||
Sbjct 62782 ATCTTTGCCTTCACATTGTCAATGGTATCAGAGCTC---TCCACTTCGAGTGTGATTGTC 62726
Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || ||||| || ||||| || |||||
Sbjct 62725 TTGCCTGTTAGCGTCTTCACAAAAATCTGCAT 62694
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/213 (70%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||||| || ||||||||||| || ||||| || | || ||||| | || ||
Sbjct 62674 ACAAGATGCAGGGTGCTCTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCCATCTTCA 62615
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || | | |||||| || | || | | ||||||||||
Sbjct 62614 AGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATCCCCTCCTTGTCCTGA 62555
Query 46505 ATCTTCTTCTTGAGC-GTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560
||||| | ||| | | | | | ||||| ||| ||||| || | ||||||||
Sbjct 62554 ATCTT-TGCTTTAACATTATCAATGGTGTCAGAACTC---TCCACCTCAAGGGTGATGGT 62499
Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || ||||| || |||||||| || |||||
Sbjct 62498 CTTTCCTGTCAGAGTCTTAACAAAAATCTGCAT 62466
>seq104979
Length=655
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||||| || | ||| |||||| ||||| ||||| ||||| | |||||| |
Sbjct 104 ACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGGACAAAGTGCGTCC 163
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||| ||||||||||| |||| || |||||||| | || | | |||||
Sbjct 164 ATCCTCGAGCTGTTTGCCGGCGAAGATCAGACGTTGCTGGTCTGGTGGAATCCCTTCCTT 223
Query 46498 GTC 46500
|||
Sbjct 224 GTC 226
>seq19149
Length=8258
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/216 (69%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|| |||||| || | ||| |||||| || || ||||| |||| || |||| |||
Sbjct 3594 CAGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCAAGGCTGCGGCTGTC 3535
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | |||||| | | |||| || | | ||||||||| | | | | |||||||||||
Sbjct 3534 CTCTAACTGCTTTCTGACGAAGATTAGCCTCTGCTGGTCCGGCCGAATCCTCTCCTTGTC 3475
Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGAT 46557
|||||| ||||| | | | |||||| |||| || || |||| |||||
Sbjct 3474 TTGGATCTTGGCCTTGACATTATCAATCGTGTCGAAGCTC---TCTACCTCCAAGGTGAT 3418
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | || || ||||| |||||||| |||||
Sbjct 3417 CGTCTTCCTAGTTAGGGTTTTCACAAAGATCTGCAT 3382
>seq13269
Length=14915
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| |||||| || ||| || || || |||||||||| | || || | || ||
Sbjct 13874 ACCAAATGCAAGGTGGACTCTTTCTGAATGTTGTAGTCGGCCAATGTCCGACCATCCTCA 13815
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || |||| | |||||| || | || | | |||||||||
Sbjct 13814 AGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGT 13755
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561
|||||| |||| | | | ||||| ||| ||| || |||| ||||| ||
Sbjct 13754 ATCTTCGCTTTGACATTATCAATGGTGTCTGAGCT---TTCAACTTCCAAAGTGATTGTC 13698
Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || |||||||||||||| |||||
Sbjct 13697 TTTCCTGTAAGAGTTTTAACAAAGATCTGCAT 13666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564294529592280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |