Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_014229.1 Length=37068 Score E Sequences producing significant alignments: (Bits) Value seq40050 91.5 3e-14 >seq40050 Length=2106 Score = 91.5 bits (100), Expect = 3e-14 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 1281 GCACAGAAGACGCTGGAGGGTACCGCGGAGGACGTCTACAGGTTCTTCCCGCAGGCCCCG 1340 || ||| ||||| |||| ||| || |||||||| | | |||| | | || | ||| Sbjct 6 GCGCAGCTGACGCAGGAGTCGACCTCGACGGACGTCTTCCGCTTCTATCGGAAGCCGCCG 65 Query 1341 CCCACGCTGTCCTACCGCAACAAGGTGGAACGGCGCAGGATCCACAAGGCCGTTTACGCG 1400 ||| |||||||| ||||||| ||| |||||| |||||||| ||| ||| Sbjct 66 GAGGGGCTCTCCTACCGGAACAAGGAGGAGCGGCGCCGGATCCACCGCTACGTCTACTTC 125 Query 1401 GACTGCCCGCATATCGACCTTGACGCGATCGAAGCGGAGGCCGCGGAACTCCTGGAGTCT 1460 | || ||| | | || |||| ||||| | ||||||||||| ||||| || Sbjct 126 GGCTCCCCTTGGGTGAATCTCGACGACATCGAGGGCGAGGCCGCGGAGATCCTGCAGAGC 185 Query 1461 GACCCCGGTCAGGCGGAGCGATTCTTCGGAAACCG 1495 ||||| ||||||||||| |||||||| ||||| Sbjct 186 GACCCGTCGCAGGCGGAGCGCTTCTTCGGGAACCG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118308021574540