Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq57685 297 2e-75
seq1930 145 9e-30
seq78534 131 2e-25
seq99200 118 1e-21
seq11270 104 3e-17
seq35533 100 4e-16
seq2373 96.9 4e-15
>seq57685
Length=1792
Score = 297 bits (328), Expect = 2e-75
Identities = 918/1397 (66%), Gaps = 39/1397 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| | ||| ||||||| ||||| | || || ||||| || ||||| || |||
Sbjct 1790 CCTCAGCAGATGATCATGCGTGTCGCCGTTGGCATTCATGGCGAGGATATCGAGGCTGCC 1731
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || | ||||| ||| |||| ||||| | || || |||||
Sbjct 1730 ATCGAGACCTACAACTACATGTCAAACAAGTAC-TTCACGCACGCTTCGCCGACACTCTT 1672
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|| |||||||| || | || || || || || ||||| || | |||||||||
Sbjct 1671 CAGTGCTGGTACTCCCAACCCACAGCTGGCCTCCTGCTTCCTCATCGACGTCAAGGAGGA 1612
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGGGCT 111848
||| | || || |||| || |||| | ||| ||| ||||| ||| |||
Sbjct 1611 CAGCATCGAGGGTATCTACGATACACTCAAG--ACCTGCGCAATGATCTCGAAGAATGCT 1554
Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTA 111906
|| || |||||| | || | || || | || | | || ||||| || | || |
Sbjct 1553 GGCGGCATCGGGTTCAACGTTCACCGCATCCGTGCGA-CTGGT-TCGTACATTGGCGGCA 1496
Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966
| ||||| ||| ||||| | | ||||||||||| || || ||| || || || |
Sbjct 1495 CCAATGGCACATCCAATGGTCTGGTACCAATGCTTCGTGTCTTCAACAATACTGCTCGTT 1436
Query 111967 ATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020
|||| |||||| ||| ||||| | || | | || | || || |||||||
Sbjct 1435 ATGTCGACCAAGGTGGCAACAAGCGTCCC---GGCGCCTTTGCCATGTACCTCGAGCCAT 1379
Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080
||||||| ||| || | | ||||| || | || ||||| || | ||||||| |
Sbjct 1378 GGCACGCTGATGTCTTCGCCTTCCTGGATCTTCGCAAGAACCACGGCAAGGAGGAGGTCC 1319
Query 112081 GGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
| ||| || || ||||||| || ||||||||||| ||||| ||||||||| | || |||
Sbjct 1318 G-TGCTCGTGACCTCTTCTATGCACTCTGGATTCCCGATCTTTTCATGAAGCGTGTCGAG 1260
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
||| ||| ||||| | || | || || || || || ||||| | || | |
Sbjct 1259 CAGAATGGAGATTGGACGCTGATGTGCCCGAACGAGTGCCCTGGTCTTGCTGACGTCTAT 1200
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259
|| || ||||| || || ||||||| ||||||||| | || |||| | || |||
Sbjct 1199 GGCGATGAGTTCGAGGCTCTCTACAACAAGTACGAGAAGGAGGGTCGTGGTCGTGAGACC 1140
Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
|| | || | || | | ||| | || || ||| || |||| || |||||||| | ||
Sbjct 1139 GTTCGCGC-ACAGAAGCTATGGTACGCCATCCTCGAGGCTCAGACAGAGACTGGCAATCC 1081
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378
| ||||| |||||||| || || |||| || || ||||| ||||| | ||||| ||
Sbjct 1080 TTTCATGCTCTACAAAGATGCTTGCAACCGCAAAAGCAATCAGAAGAACCTCGGTGTCAT 1021
Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438
|| ||||| ||||| ||||| ||| | || | ||| | |||||| |||||
Sbjct 1020 TCGCAGCTCCAATCTCTGCACAGAGATCATTGAGTATACTGCTCCTGATGAGGTTGCTGT 961
Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACATTT 112496
|| ||| | || || | || || || | ||||| || || | ||| || | ||
Sbjct 960 TTGCAACTTGGCTTCTCTGGCACTTCCTACCTATGTCGA--CATGGCCAACGAGTCTTTC 903
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | |||| ||||| ||||| | ||| || ||||| |||| | ||
Sbjct 902 GACTTCCAAAAGCTCCATGAAGTCGTTCAGGTCGTCGTCAAGAACCTGAACAAGATCATC 843
Query 112557 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613
| | ||| || || || |||| ||||| || || |||||| | ||||| ||
Sbjct 842 AACATCAATCACTATCCAGTGCCTGAG---GCTCGCAAGTCCAATATGCGTCACCGCCCT 786
Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 112672
|| ||||| ||||| |||||||||||||||| |||| | || || ||| |||| ||
Sbjct 785 ATCGGTCTTGGTGTGCAAGGTCTCGCGGATGCATTCTTGGCTCTG-CGCATGCCATTCGA 727
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
|| || || || |||| | || || ||||| || || ||||| |||||
Sbjct 726 CTCTCCAGAGGCTCGTCAACTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCT 667
Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
|| | || ||||| | | |||||| || || |||| ||||| |||||
Sbjct 666 CACTGCCTCGTGCGATTTGGCCAAAGAACTTGGTCCTTACGAGACCTACGAGGGCTCTCC 607
Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTAC 112850
| ||| ||||| | |||||||| || ||||||| |||| || | || | ||
Sbjct 606 TGTTTCGCAAGGCGAGCTTCAATACGACATGTGGG-GTGTGACTCCCA-CTGACCTCTGG 549
Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910
|||||| |||||||||||| ||| || | || | || || |||| | |
Sbjct 548 GACTGGAACGCTCTCAAGGCTAAGATCGCTGACCACGGCGTCCGAAATTCTCTTCTTGTC 489
Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970
||||| ||||| || ||||| || | || ||| |||| || || ||||| || ||
Sbjct 488 GCACCTATGCCGACTGCCTCGACATCGCAGATCATGGGCTTCAACGAGTGCTTCGAGCCA 429
Query 112971 TACACGACGAACATCTA 112987
||||| | ||||| ||
Sbjct 428 TACACTTCCAACATTTA 412
>seq1930
Length=68304
Score = 145 bits (160), Expect = 9e-30
Identities = 291/423 (69%), Gaps = 14/423 (3%)
Strand=Plus/Minus
Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACC--TGTTTCGTTATCAA 15975
|| || || ||| | | || ||||| || || |||| || || |||| | || |||
Sbjct 60272 TCGAGAATGTCAGCCCTGTTGGTTGCTGCAATCACAATGATGCCAGTGTTACCTT--CAA 60215
Query 15976 AACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 16035
|||||||||| ||||||||||||||||||| || ||||| | |||||||||| ||
Sbjct 60214 AACCATCCATTTCTGTCAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTCCCT---C 60158
Query 16036 TACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 16092
|||| |||| | | |||| ||| || |||||||| ||||||| || || ||||
Sbjct 60157 CACCAATTCCAGTTCCTCTTTGCCGTCCAACAGCATCAATTTCATCAACAAATACAATGC 60098
Query 16093 ATGGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151
| || ||| || | | ||| ||| ||||| || || || ||| || ||||||
Sbjct 60097 AAGGAGCATTCTCCTTTGCCTTCTTGAAA-AGATCACGGACTCGAGAGGCACCAACACCA 60039
Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACC 16210
|| |||||||| ||||| | || | | | || | || || || ||| || ||||||
Sbjct 60038 ACGAACATCTCAACAAACTCTGAACCTG-AGATAGAGAAAAACGGAACACCAGCTTCACC 59980
Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270
||||| || ||| || |||||||| || || || || ||| || || | ||
Sbjct 59979 AGCAATTGCCTTGGCTAGCAGAGTCTTCCCAGTTCCAGGAGGACCGATAAGAAGAACCCC 59920
Query 16271 TCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAAT 16330
| |||||| || ||| || || | | || ||||| | ||| ||||| ||||| |
Sbjct 59919 TTTTGGAATGCGAGCCCCAATTGCAGTGAACCTTTCAGGCTTCTTCAGAAACTCCACTAC 59860
Query 16331 CTC 16333
|||
Sbjct 59859 CTC 59857
>seq78534
Length=1057
Score = 131 bits (144), Expect = 2e-25
Identities = 541/840 (64%), Gaps = 24/840 (3%)
Strand=Plus/Plus
Query 112000 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 112059
|||| | || ||||||||||||||||| ||| | | |||| || | ||| | |
Sbjct 198 TCGCCATTTACCTTGAGCCATGGCACGCTGATGTATTCGAGTGGCTCAACTTGAGAAAGA 257
Query 112060 ACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGAT 112118
|||| || | || || | | | ||| | |||||||||| ||||||||||||||| ||
Sbjct 258 ACCACGGCAAAGAAGAAGT-CAGAGCCAGAGATCTCTTCTACGCTCTCTGGATTCCTGAC 316
Query 112119 CTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCA 112178
|| ||||||||| |||| || ||| || | ||| | || | ||||| ||| | |
Sbjct 317 CTATTCATGAAGCGAGTAGAAAAGAATGCAGACTGGACACTGATGTGTCC---CAATGAA 373
Query 112179 ---CCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG 112235
|| ||| | || || | || || || || || ||| | | ||| || || |||
Sbjct 374 TGTCCTGGTTTGTCTGACTGCTACGGCGACGAATTCGAGGCCTTGTTCACCAAATATGAG 433
Query 112236 GAAG----AAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT 112291
| | |||| || || | | || | ||| | ||||| | || || |
Sbjct 434 AAGGCAGGAAAG--GGCCGCCAG--ACAATTAAGGCTCAGAAACTGTGGTATGCCATCAT 489
Query 112292 CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAA 112351
|| |||| || |||||||| | |||| ||||| |||||||| ||||| |||| ||
Sbjct 490 TGAGGCTCAGACTGAGACTGGCAATCCATTCATGCTGTACAAAGATGCCTGCAACCGCAA 549
Query 112352 GAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411
||| || |||||||| |||| ||||||| ||||||||||| || |||||| | ||
Sbjct 550 GAGCAACCAAAAGAACCTGGGAACGATCAAGTCATCCAACCTCTGCACCGAAATCATTGA 609
Query 112412 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTA 112471
| ||| | |||||| || || || || ||||| || || | || || || |
Sbjct 610 GTATACTGCTCCAGATGAAGTCGCAGTTTGCAATCTCGCGTCTGTCTCACTGCC--AGCA 667
Query 112472 TGTG-GATCCAGAGACAAAGACATTT--GATTATGAAAAACTCCACGAAGTTACGAAAAC 112528
| || | |||| | | ||| || | |||| | | | | || | || | ||
Sbjct 668 TTTGTCAACCAG-GCCGAAGGAATCTACGATTTTCAGGGATTGCATAATGTCATCAAGGT 726
Query 112529 TGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG 112588
| ||| ||| | |||| |||| | | || || || || || || ||
Sbjct 727 CATGACACGCAACTTGAACAAGATTATCAACATCAACTTCTATCCTGTGCCCGAAGCACG 786
Query 112589 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATT 112648
|| || |||||||| ||||| ||||| || ||||| |||||| | || |||| |||
Sbjct 787 AAAGAGCAACATGAGACATCGTCCCATTGGCCTGGGTGTACAAGGTTTGGCTGATGCATT 846
Query 112649 CAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATAT 112707
||| ||||| || |||||||| | |||||| | | |||| | || |
Sbjct 847 CATGGCTTTG-CGAATGCCATTTGATAGCCCCGAAGCCAGACAGCTCAACATCCAGATCT 905
Query 112708 TTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTC 112767
||||||| | || ||||| || || ||| | || | ||| ||| |||||
Sbjct 906 TTGAGACTGTCTACCACGCTGCGCTGACTGCGTCATGCGAAATTGCAAAGGAGCTTGGTC 965
Query 112768 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827
| || || || | | || || || | |||||||| |||||| | ||| |||||||
Sbjct 966 CTTACGAGACTTACCAAGGCTCGCCTGTCTCACAAGGTCAGCTTCAGTATGACATGTGGG 1025
>seq99200
Length=725
Score = 118 bits (130), Expect = 1e-21
Identities = 182/258 (71%), Gaps = 10/258 (4%)
Strand=Plus/Minus
Query 102079 AGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATT 102138
|||| || | ||||| || || ||| | || ||||||| || | ||||| || || |
Sbjct 469 AGAAACAGTACCTCTTCGATGCTATCGACACTATTCCATGCATCCGCAAGAAGGCTGAGT 410
Query 102139 GGGCTATGAAGTGGTT---TGATAC--AAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGC 102193
|||| ||| ||| | ||||| |||| | || || | || || | ||
Sbjct 409 GGGCGTTGAGATGGATCTCTGATAAGGAAAGCAGT-----TTCGCCCAACGTCTGGTGGC 355
Query 102194 ATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAA 102253
||| || |||||||| ||||||||||| || || ||| | | |||| ||||||||
Sbjct 354 ATTCGCCGCCGTTGAGGGCATCTTCTTCTCCGGGTCTTTCGCCTCCATTTTCTGGCTCAA 295
Query 102254 GAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313
|||| ||||||||||||| ||||| |||||||||||||| ||||||||||| || ||
Sbjct 294 GAAGAGAGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTGATCTCTCGTGATGAAGG 235
Query 102314 ACTCCACCAAGAGTTTGC 102331
| ||| ||| || ||
Sbjct 234 TATGCACACAGATTTCGC 217
>seq11270
Length=18388
Score = 104 bits (114), Expect = 3e-17
Identities = 181/262 (69%), Gaps = 5/262 (2%)
Strand=Plus/Minus
Query 102060 TATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGT 102119
||||| ||||| || |||||||| | ||| || | || || | || ||||| ||
Sbjct 5759 TATATCAAGGACTCGGCCGAGAAGAACCGGCTGTTCCACGCGATGGAGACCGTTCCTTGC 5700
Query 102120 ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATA-CAAAGTCGCGTTCCTTTGC 102178
| ||||| || || ||||| || |||| | || | || ||||| ||
Sbjct 5699 GTGGCGAAGAAGGCCGAGTGGGCCCTGCGGTGGATCGACGGCGGAGAATCGTTC----GC 5644
Query 102179 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGC 102238
||| | ||| |||| || || || || || || || |||||||| ||| |||||||||
Sbjct 5643 CGAGAGGCTCATCGCTTTCGCCTGCGTCGAAGGCATTTTCTTCTCCGGTAGCTTCTGCGC 5584
Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298
|| | |||||| || ||||| || | ||||| || | ||||||||||||| | ||
Sbjct 5583 GATATTTTGGCTAAAAAAGCGCGGGTTAATGCCCGGGTTAACCTTCTCCAACGAGTTGAT 5524
Query 102299 CTCTCGTGACGAGGGACTCCAC 102320
||| || ||||| || ||||||
Sbjct 5523 CTCGCGAGACGAAGGCCTCCAC 5502
>seq35533
Length=2598
Score = 100 bits (110), Expect = 4e-16
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305
|||||||||||||| ||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct 2595 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 2536
Query 102306 GACGAGGG 102313
||||||||
Sbjct 2535 GACGAGGG 2528
>seq2373
Length=61655
Score = 96.9 bits (106), Expect = 4e-15
Identities = 100/130 (77%), Gaps = 12/130 (9%)
Strand=Plus/Plus
Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033
||| ||||||||||||||||| ||||| ||||||||||| |||| ||||||||| |
Sbjct 23220 AAATCCATCCATCTCTGTCAAGAGCTGATTAATAGTTTGCTCCCTCTCATCATTCCC--- 23276
Query 16034 CATACCACC-AGCACTG-----CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGAC 16087
||| || ||| ||| | ||| | ||||| ||||||||||||||||| || ||
Sbjct 23277 ---ACCTCCAAGCCCTGCCCCTCTCTGCCTCCCCACTGCATCAATCTCATCAATAAACAC 23333
Query 16088 GATGCATGGT 16097
||||| |||
Sbjct 23334 AATGCAGGGT 23343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 619705845544080
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