Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_015251.1
Length=235229
Score E
Sequences producing significant alignments: (Bits) Value
seq89524 91.5 2e-13
seq28578 86.0 9e-12
>seq89524
Length=860
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 112478 GCGGGTGTAGCTCAGTTGGTAGAGCTTCTGATTTCCAATCAGAATGTCGCGTGTTCGAGT 112537
|||||| ||||||||| |||||||| ||| || |||| ||||||||||||||||||||
Sbjct 188 GCGGGTATAGCTCAGT-GGTAGAGCATCTCGTTGCCAACGAGAATGTCGCGTGTTCGAGT 130
Query 112538 CACGTTACCCGC 112549
||||||||||||
Sbjct 129 CACGTTACCCGC 118
>seq28578
Length=3912
Score = 86.0 bits (94), Expect = 9e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 112478 GCGGGTGTAGCTCAGTTGGTAGAGCTTCTGATTTCCAATCAGAATGTCGCGTGTTCGAGT 112537
|||||| ||||||||| |||||||| ||| || |||| |||||||||||||||||| |
Sbjct 3732 GCGGGTATAGCTCAGT-GGTAGAGCATCTCGTTGCCAACGAGAATGTCGCGTGTTCGAAT 3790
Query 112538 CACGTTACCCGC 112549
||||||||||||
Sbjct 3791 CACGTTACCCGC 3802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751348053467160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |