Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_015465.1 Length=33004 Score E Sequences producing significant alignments: (Bits) Value seq82326 82.4 2e-11 >seq82326 Length=980 Score = 82.4 bits (90), Expect = 2e-11 Identities = 131/186 (70%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 22376 CGCGGCTGATGGATTGGCGAATCCACCAGTAGGCATAGGTCGAGAACTTGTAGCCGCGG- 22434 ||||| | |||| || |||||||||||| ||| || ||||||||||||||||| ||| Sbjct 392 CGCGGGTAATGGCCTGCCGAATCCACCAGGTGGCGTACGTCGAGAACTTGTAGCCACGGC 451 Query 22435 GATGGGTCGAAGAGCTCAGTGGCCCGGGCCAGGCCCATGTTGCCATCTTGCACAAGGTCA 22494 ||| ||||| || ||| |||||| |||||||| || || | ||||| Sbjct 452 GAT-ACTCGAACTTGTCCACCGCCTTCATCAGGCCAATGTTGCCCTCCTGGATCAGGTCC 510 Query 22495 AGCATCTCAAGGCTTGTGCAGCGTTTGACGTATTTCTTTGCAATAGTGACCACCAGGCGG 22554 || | || || || ||| ||| ||| ||||| || || | |||||| ||||| Sbjct 511 AGGAACTGCAG------GCCGCGGTTGGTGTACTTCTTGGCGATGGAGACCACGAGGCGC 564 Query 22555 AGGTTG 22560 |||||| Sbjct 565 AGGTTG 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105323851990988