Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_016164.1 Length=30332 Score E Sequences producing significant alignments: (Bits) Value seq88797 80.6 5e-11 >seq88797 Length=868 Score = 80.6 bits (88), Expect = 5e-11 Identities = 116/161 (72%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 20866 TGGATCGGCACGCGGATCATGCGATCTGATGT-GTCGATCGCGCGGCAGATCGCTTGCCT 20924 |||| |||| |||||| |||| | | ||| | | || || ||| |||||| |||| Sbjct 69 TGGACGGGCAGCCGGATCGTGCGGCC-GCTGTCGGCCATGGCCCGGGTGATCGCCTGCCG 127 Query 20925 GATCCACCAGTAGCTGTAGGTACTGAACTTGTAGCCACGGGAGGCGTCGAATAGCTCAAC 20984 |||||||||| | |||||| ||||||| |||| || | |||||| ||| || Sbjct 128 GATCCACCAGGTGGCGTAGGTGGAGAACTTGAAGCCCTTGGTGTAGTCGAACTTCTCGAC 187 Query 20985 AGCGCGATGCAGGCCGATGGTGCCCTCGCTGATGAGGTCCA 21025 ||||| |||||||| | ||||||| ||||||||||| Sbjct 188 CGCGCGGATCAGGCCGACGTTGCCCTCCTGGATGAGGTCCA 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96787016083692