Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_016762.1
Length=49135
Score E
Sequences producing significant alignments: (Bits) Value
seq112858 118 3e-22
seq99257 91.5 5e-14
>seq112858
Length=569
Score = 118 bits (130), Expect = 3e-22
Identities = 168/232 (72%), Gaps = 11/232 (5%)
Strand=Plus/Minus
Query 21287 AAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCC 21346
|||||||| |||| |||||| || | || || |||| |||||||||||| |||||
Sbjct 481 AAGCTGCTCGCGAAGGAGCTCGGCGTGCCGGTCATCGCGCTGTCGCAGCTGAACCGAGGG 422
Query 21347 CTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATC 21406
||||||||| || ||||||| || ||| || ||||| |||||||| ||| |||||
Sbjct 421 TCGGAGCAGCGCGCGGACAAGCGGCCCGCGATCTCCGACCTCCGCGAGTCGGGGTCGATC 362
Query 21407 GAGCAGGACGCCGA---TGTGATCATGTTCGTGTACCGCGACGAG-GTCTACCACCCGGA 21462
|||||||||||||| |||||| || || |||| || ||| | | | ||| ||
Sbjct 361 GAGCAGGACGCCGACATCGTGATCCTG---CTGCACCGGGA-GAGCGCGTTCGACCGCGA 306
Query 21463 TACCCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514
| | | ||| || | || || | ||| |||||||||||||| ||||
Sbjct 305 TCAGCCGAACCCCGAC---GCCGACCTCATCGTCGCGAAGCACCGCGCCGGC 257
>seq99257
Length=723
Score = 91.5 bits (100), Expect = 5e-14
Identities = 116/157 (74%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 21292 GCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGA 21351
|||||| | |||||| | | || | |||| ||||||||||| || | ||
Sbjct 677 GCTGGCCAAGGAGCTGGCGGTGCCGATCATCGCCCTGTCGCAGCTGTCGCGTCAGGTCGA 618
Query 21352 GCAGCG-GCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGC 21410
| | || | ||| |||||| ||| | | |||||||||||||| || || |||||||||
Sbjct 617 GAACCGCGACGA-CAAGCGCCCGCAGCTCTCGGACCTGCGCGAATCGGGCTCGATCGAGC 559
Query 21411 AGGACGCCGATGTGATCATGTTCGTGTACCGCGACGA 21447
|||||||||| ||| | |||||||||| |||||| ||
Sbjct 558 AGGACGCCGACGTGGTGATGTTCGTGTTCCGCGAGGA 522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156861164872946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |