Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_016767.1
Length=60714
Score E
Sequences producing significant alignments: (Bits) Value
seq35216 105 3e-18
>seq35216
Length=2640
Score = 105 bits (116), Expect = 3e-18
Identities = 182/261 (70%), Gaps = 4/261 (2%)
Strand=Plus/Minus
Query 35177 CCGGCGGGCGCAACGTGATTACGGCCACCGGCACGCCGATCAGCAACACCATGGCTGAGA 35236
|||||| || ||| |||| ||| | ||||||||||||| ||||||||||| ||||
Sbjct 550 CCGGCG--CGGAACCTGATCCTGGCGTCGGGCACGCCGATCACCAACACCATGGGCGAGA 493
Query 35237 TGTACACCATGCAGCGCTACATGGATTACGACACCCTGAAGGCTCAGGGACTGTCGCACT 35296
||| || | ||||||||| |||| | ||| ||| ||| | || ||| | |
Sbjct 492 TGTTCAGCCTGCAGCGCTTCATGCAGCCGGACGTGCTGGAGGAGCGCGGCCTGCACGAGT 433
Query 35297 TCGATGCGTGGGCGCGCATGTTCGGTGAGGTTGTCACCGATTGGGAGCTGTCACCGTCCG 35356
|||| || ||||| | ||||| || || || || ||||||| |||||||
Sbjct 432 TCGACGCCTGGGCCTCGACCTTCGGCGACACGGTGACGGAACTGGAGCTGCAGCCGTCCG 373
Query 35357 GCCAGTACAAGATGAACAGCCGGTTCGCGAAGTTCGTCAACATGCCGGAGCTGAT-GCAG 35415
|| | ||| || | | ||||||||||| ||||||||| || |||| ||||| ||
Sbjct 372 GCAACTACCAGCCGGTGACGCGGTTCGCGAACTTCGTCAACGTGGCGGACCTGATCGCCA 313
Query 35416 CGTTACACCTCGTTCGCGGAC 35436
||| | |||| ||||||||
Sbjct 312 TGTT-CCGCTCGGTCGCGGAC 293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 193855185445768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |