Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq35216 105 3e-18 >seq35216 Length=2640 Score = 105 bits (116), Expect = 3e-18 Identities = 182/261 (70%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 35177 CCGGCGGGCGCAACGTGATTACGGCCACCGGCACGCCGATCAGCAACACCATGGCTGAGA 35236 |||||| || ||| |||| ||| | ||||||||||||| ||||||||||| |||| Sbjct 550 CCGGCG--CGGAACCTGATCCTGGCGTCGGGCACGCCGATCACCAACACCATGGGCGAGA 493 Query 35237 TGTACACCATGCAGCGCTACATGGATTACGACACCCTGAAGGCTCAGGGACTGTCGCACT 35296 ||| || | ||||||||| |||| | ||| ||| ||| | || ||| | | Sbjct 492 TGTTCAGCCTGCAGCGCTTCATGCAGCCGGACGTGCTGGAGGAGCGCGGCCTGCACGAGT 433 Query 35297 TCGATGCGTGGGCGCGCATGTTCGGTGAGGTTGTCACCGATTGGGAGCTGTCACCGTCCG 35356 |||| || ||||| | ||||| || || || || ||||||| ||||||| Sbjct 432 TCGACGCCTGGGCCTCGACCTTCGGCGACACGGTGACGGAACTGGAGCTGCAGCCGTCCG 373 Query 35357 GCCAGTACAAGATGAACAGCCGGTTCGCGAAGTTCGTCAACATGCCGGAGCTGAT-GCAG 35415 || | ||| || | | ||||||||||| ||||||||| || |||| ||||| || Sbjct 372 GCAACTACCAGCCGGTGACGCGGTTCGCGAACTTCGTCAACGTGGCGGACCTGATCGCCA 313 Query 35416 CGTTACACCTCGTTCGCGGAC 35436 ||| | |||| |||||||| Sbjct 312 TGTT-CCGCTCGGTCGCGGAC 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193855185445768