Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq99200 129 7e-25
>seq99200
Length=725
Score = 129 bits (142), Expect = 7e-25
Identities = 325/492 (66%), Gaps = 3/492 (1%)
Strand=Plus/Plus
Query 37196 ACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttt 37255
||||||||| | | |||| || || || || || | || ||||| | |||||| ||
Sbjct 234 ACCTTCATCACGAGAGATCAGCTCGTTGGAGAATGTCAGACCAGGCATGAGACCTCTCTT 293
Query 37256 tttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAA 37315
|| | ||| || || | || ||||| || || ||||| || || ||||| || || ||
Sbjct 294 CTTGAGCCAGAAAATGGAGGCGAAAGACCCGGAGAAGAAGATGCCCTCAACGGCGGCGAA 353
Query 37316 TGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATC 37375
||| || |||||| ||||| | | |||||| |||||| | | ||| ||
Sbjct 354 TGCCACCAGACGTTGGGCGAAACTGCTTTCCTTATCAGAGATCCATCTCAACGCCCACTC 413
Query 37376 TGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTC 37435
||||| | ||| ||| || || || || | ||||| | | ||| | |
Sbjct 414 AGCCTTCTTGCGGATGCATGGAATAGTGTCGATAGCATCGAAGAGGTACTGTTTCTGCTT 473
Query 37436 ACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAAT 37495
||| | | | | |||||||| || || || |||||||| ||||| ||||| || ||
Sbjct 474 TGGCTCTTTCACAAATGTATCAATGAGCAAGCTGTACATTTCGGAGTGGATATTCTCCAT 533
Query 37496 AGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCT 37555
||||| ||||||||||| || | ||| || | || ||| || || | || ||
Sbjct 534 CATGATCTGGAAACCATAAAAGCATCGAGCCTCTGGTACTTGCACCTCACCCGAGAATCT 593
Query 37556 CTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTT 37615
|| | | ||| || || || || || ||| || || ||||||||||| || | |
Sbjct 594 CTCGACAAGGTTCTCGTTGACAATACCGTCAGAGGCAGCGAAGAAAGCAAGGACGTGTGA 653
Query 37616 TATAAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAA 37672
||||| | ||| ||||| | |||| | || | ||| || | ||||||||||| |
Sbjct 654 GATAAAGTATCTCTCATCGTCGTTGAGCTTGTTGTGCCAGTCGTGCATATCTTTTGAGAG 713
Query 37673 ATCAACTTCATC 37684
||| || || ||
Sbjct 714 ATCCACCTCTTC 725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 591327712387560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |