Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq103386 102 1e-16 >seq103386 Length=673 Score = 102 bits (112), Expect = 1e-16 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 23041 GGTGTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTTTCCATTCTGGTTCCAGCGGCGT 23099 || || || || || |||||||| || | || | || | ||| | || ||||||||||| Sbjct 479 GGCGTCGTGTTCGAGAACTCCAGCGTGA-CGTGTCCCTCCCAGCCCGGCTCCAGCGGCGT 537 Query 23100 GACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATAC 23159 ||||| |||||||| ||||| ||||| || ||||||||||||||||| || || | || Sbjct 538 CACGTTGACGATGATCCCGCACCGCGCGTAGGTCGATTTGCCGAGGCAAATGACGAGCAC 597 Query 23160 GTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAAT 23219 ||| || || | ||| | || ||| ||||||| ||||| || ||||| || Sbjct 598 GTCGCGAGGCACCCGGAAATACTCGACCGTCCTTGCCAGCGCGAACGAATTGGGCGGGAT 657 Query 23220 GAT 23222 ||| Sbjct 658 GAT 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896094742107120