Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq115307 122 2e-23 >seq115307 Length=544 Score = 122 bits (134), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 30161 GCCGCCTGATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCG 30220 || |||||||||| || || ||| ||||| | | || ||| || |||||||| Sbjct 216 GCTGCCTGATGGCGGGTGAAACCGTCATCACGCTGATCGGGAACCTCACGAACGACCCCG 157 Query 30221 AACTCAGGTTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCC 30280 |||| | |||||||| | || ||||| || || |||||| | |||||||||| |||| Sbjct 156 AACTGCGCTTCACCCCGTCGGGTGCCGCGGTGGCCAACTTCACGGTCGCCTCGACTCCCC 97 Query 30281 GCACGTTCGACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCT 30340 ||||||||||||| | ||||| ||| ||||||||||| |||||| || ||| Sbjct 96 GCACGTTCGACCGTCAGTCGAACGAGTGGAAGGACGGCGAGACGCTGTTCATG--CGTTG 39 Query 30341 C-CG-TATGGCGCCAGCAGGCCGAGAACGTCGCCG 30373 | || | |||||| | ||| ||||||||||||| Sbjct 38 CGCGATCTGGCGCGAAGCGGCGGAGAACGTCGCCG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120046060022732