Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq107501 86.0 1e-11 seq101035 86.0 1e-11 >seq107501 Length=626 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574 |||||| |||||||| ||||||||| |||| ||||| | || |||||||||||||| | Sbjct 306 GGGGCTGTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAACGGTTCGATC 247 Query 324575 CCGTTTAGCTCCACAAA 324591 ||||| |||||||| || Sbjct 246 CCGTTCAGCTCCACCAA 230 >seq101035 Length=702 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/83 (84%), Gaps = 4/83 (5%) Strand=Plus/Plus Query 324411 AAAGAAATTGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTG 324470 |||||||| |||| ||||||||||||| |||| ||||||||||||| |||||||||| Sbjct 374 AAAGAAAT-GCGGGATAGAGCAGTCTGGCAGCTCGCAAGGCTCATAATCTTGAGGTCG-- 430 Query 324471 TTTGGTTCGAATCCCACCTCCGC 324493 | ||||||||||| || |||| Sbjct 431 -TAGGTTCGAATCCTACTCCCGC 452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1145626173871322