Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq107491 102 1e-16 seq76089 87.8 2e-12 >seq107491 Length=627 Score = 102 bits (112), Expect = 1e-16 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 167464 AATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAA 167523 ||||||||||| || ||||||||||||| || ||| ||||||||||||| |||||| | Sbjct 94 AATGGTCGGGGCGATAGGATTCGAACCTACGACCCTCTGGTCCCAAACCAGATGCGCT-A 36 Query 167524 CCAGACTGCGCTACACCCCGA 167544 ||||||||||||||||||||| Sbjct 35 CCAGACTGCGCTACACCCCGA 15 >seq76089 Length=1116 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 167465 ATGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAAC 167524 |||||||| |||| ||||||||||||| || |||| | ||||| ||| | ||||||| || Sbjct 251 ATGGTCGGAGTGATAGGATTCGAACCTACGACCCCCTCGTCCCGAACGAGGTGCGCT-AC 193 Query 167525 CAGACTGCGCTACACCCCGA 167544 ||| ||||||||||| |||| Sbjct 192 CAGGCTGCGCTACACTCCGA 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583960834636920