Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq107491 84.2 3e-11 >seq107491 Length=627 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 199781 TCGGTGATTAGCGCAGT-TGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 |||| | ||||||||| ||||||||| |||||||||||||||||||||| |||||||| Sbjct 15 TCGGGGTGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCGA 74 Query 199840 GTCCTGTATCACCGACCA 199857 |||| | | ||||||| Sbjct 75 ATCCTATCGCCCCGACCA 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740211481117320