Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq99200 138 2e-27 seq10846 136 6e-27 seq3441 136 6e-27 seq23762 104 3e-17 seq16751 104 3e-17 seq1750 102 1e-16 seq1584 102 1e-16 seq124414 100 4e-16 seq13269 100 4e-16 seq3871 98.7 1e-15 seq11270 93.3 6e-14 >seq99200 Length=725 Score = 138 bits (152), Expect = 2e-27 Identities = 341/514 (66%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || || ||||| ||||| | ||||||||| | || || | ||||| || || | Sbjct 214 CAGGCGAAATCTGTGTGCATACCTTCATCACGAGAGATCAGCTCGTTGGAGAATGTCAGA 273 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 || ||||| | |||||| || || ||||| || || || |||||| | || ||||| Sbjct 274 CCAGGCATGAGACCTCTCTTCTTGAGCCAGAAAATGGAGGCGAAAGACCCGGAGAAGAAG 333 Query 18278 ATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGT 18337 || ||||||||| ||||| || | | | || || |||||| || || |||| Sbjct 334 ATGCCCTCAACGGCGGCGAATGCCACCAGACGTTGGGCGAAACTGCTTTCCTTA-TCAGA 392 Query 18338 -ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396 |||||| | ||||| || | | || || || ||| | || ||||||| Sbjct 393 GATCCATCTCAACGCCCACTCAGCCTTCTTGCGGATGCATGGAATAGTGTCGATAGCATC 452 Query 18397 AAACAAATCATCTTTTT-CTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACA 18455 || | | | ||| | |||||| ||||| | | | || || || | ||| |||| Sbjct 453 GAAGAGGTACTGTTTCTGCTTTGGC-TCTTTCACAAATGTATCAATGAGCAAGCTGTACA 511 Query 18456 TTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGAT 18515 |||| || || || | ||||| ||||| |||| |||||| ||| |||||| || Sbjct 512 TTTCGGAGTGGATATTCTCCATCATGATCTGGAAACCATAAAAGCATCGAGCCTCTGGTA 571 Query 18516 ATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575 ||| | ||| | | ||||| || || | ||||| || || |||||||||| | | Sbjct 572 CTTGCACCTCACCCGAGAATCTCTCGACAAGGTTCTCGTTGACAATACCGTCAGAGGCAG 631 Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTT---CC 18632 |||| || || | || | | || || | | | |||| || ||||| ||||| || Sbjct 632 CGAAGAAAGCAAGGACGTGTGAGATAAAGTATCTCTCATCGTCGTTGAGCTTGTTGTGCC 691 Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTC 18666 | || | ||||||||||| ||||| || ||||| Sbjct 692 AGTCGTGCATATCTTTTGAGAGATCCACCTCTTC 725 >seq10846 Length=19378 Score = 136 bits (150), Expect = 6e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| |||| || |||||||||||||| ||||| || || || || || Sbjct 11503 AATGCAAATTTTTGTTAAGACCTTGACTGGAAAAACCATTACTTTGGAGGTTGAGAGCTC 11444 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| || || ||| ||| || ||||| ||||| || || || || || || Sbjct 11443 TGATACTATTGATAATGTCAAAGCTAAGATCCAAGACAAAGAGGGTATCCCACCGGACCA 11384 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || |||||| ||| || |||||| | |||||| ||||| ||| | ||||| || Sbjct 11383 ACAGAGGCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGAACCTTAGCTGATTACAA 11324 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| ||| |||| || || || ||| | |||| |||| || Sbjct 11323 CAT-TCAAAAGGAGTCGACCCTGCACTTGGTGCTGCGATTGCGAGGAGG 11276 Score = 107 bits (118), Expect = 3e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || |||||||||||||| ||||| || ||||| || || Sbjct 11731 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 11672 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| ||||| ||| ||||| ||||| || || || || || || || || Sbjct 11671 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCGGATCA 11612 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||| | |||||| |||||||| |||||| Sbjct 11611 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGAT 11575 >seq3441 Length=50379 Score = 136 bits (150), Expect = 6e-27 Identities = 159/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || ||||||||||||||||| ||||| ||||| ||| ||| Sbjct 14374 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACTATAACATTGGAAGTTGAAAGTTC 14315 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| |||| || || || || |||||||| ||||| || || ||||| || || Sbjct 14314 TGATACTATTGATAATGTCAAGGCAAAGATACAAGACAAAGAGGGGATCCCTCCGGACCA 14255 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || |||| | ||| || |||||||| |||||| | ||| | | ||||||| Sbjct 14254 GCAGAGGCTGATATTTGCTGGCAAGCAGCTGGAAGATGGGCGCACTCTTGCTGATTATA- 14196 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032 ||||||||| || |||| ||||| || ||| Sbjct 14195 -ATATCCAAAAGGAATCGACACTTCACTTGGTG 14164 Score = 109 bits (120), Expect = 8e-19 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| |||||| | || || ||||||||||||| || || || || || ||| || Sbjct 14830 AATGCAGATATTTGTCAAGACCCTGACTGGAAAAACCATCACCTTGGAGGTGGAAAGCTC 14771 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| || || || ||||||||||| ||||| || || || ||||| || Sbjct 14770 GGATACCATTGATAATGTCAAGGCAAAAATACAAGACAAAGAGGGTATCCCACCAGACCA 14711 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || ||||||| |||||| |||||||| |||||| | || | |||| |||| Sbjct 14710 GCAGAGGTTGATTTTTGCCGGCAAGCAGCTTGAAGATGGTCGTACCCTTGCAGACTATA- 14652 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032 | ||||||| ||| | || || || || ||| Sbjct 14651 -ACATCCAAAAGGAGTCTACCCTCCACTTGGTG 14620 Score = 107 bits (118), Expect = 3e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || ||||||||||| ||||| || || | || || ||| |||| Sbjct 14145 ATGCAGATTTTTGTGAAGACATTGACTGGTAAAACCATAACTCTGGAGGTGGAAAGTTCT 14086 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||| ||| ||| || || || ||||| ||||| || || || || Sbjct 14085 GATACCATTGACAACGTAAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCCGACCAG 14026 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||||| ||| ||||||||| | || ||| | ||| | ||||||||| Sbjct 14025 CAGAGGCTGATTTTTGCTGGTAAGCAGTTGGAGGATGGGCGGACTCTTGCAGATTATA-- 13968 Query 156003 ATATCCAAA--GAGGCGACGCTTCA 156025 | ||||||| ||| | || ||||| Sbjct 13967 ACATCCAAAAGGAGTCAACTCTTCA 13943 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||| || ||||| || ||||| || ||||| || |||||| || Sbjct 14601 ATGCAAATTTTTGTTAAGACTTTGACAGGTAAAACAATAACATTGGAGGTCGAAAGCTCG 14542 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| || || || || || || || || || ||||| ||| Sbjct 14541 GATACCATTGACAATGTCAAAGCAAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAA 14482 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||| || |||||||||||||| | ||| | |||| ||||| Sbjct 14481 CAGAGGTTGATCTTTGCGGGCAAGCAGCTCGAAGACGGTCGTACTCTTGCAGACTATAAC 14422 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| | || || ||||| ||| Sbjct 14421 ATCCAGAAGGAGTCCACCCTCCATTTGGTG 14392 >seq23762 Length=5545 Score = 104 bits (114), Expect = 3e-17 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || |||||||||||||| || || || || || ||| || Sbjct 880 AATGCAGATTTTTGTGAAGACTTTGACTGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 939 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | |||| || || || || |||||||| || ||||| || || | ||| || Sbjct 940 AGACACTATTGACAATGTCAAGGCCAAGATACAAGACAAGGAAGGTATCCCACTAGACCA 999 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||| | || | ||| || | ||| || |||||| || ||| | ||||||| | Sbjct 1000 ACAAAGGCTTATCTTTGCAGGAACGCAACTTGAAGATGGAAGGACTCTTGCAGATTACA- 1058 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTG 156032 ||||||||| ||| | || |||||| ||||| Sbjct 1059 -ATATCCAAAAGGAGTCTACCCTTCATCTAGTG 1090 >seq16751 Length=10463 Score = 104 bits (114), Expect = 3e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || |||||||||||||| ||||| || ||||| || || Sbjct 6976 AATGCAAATTTTTGTGAAGACCTTGACTGGAAAAACCATTACTTTGGAAGTTGAGAGCTC 6917 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| ||||| ||| ||||| ||||| || || || || || ||||| || Sbjct 6916 TGACACCATTGATAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGACCA 6857 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||| | |||||| || || || |||||| Sbjct 6856 GCAGAGGTTGATCTTTGCCGGCAAACAACTTGAAGAT 6820 Score = 86.0 bits (94), Expect = 9e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| ||| | ||||| || || || || | || || ||| || Sbjct 7203 ATGCAGATCTTTGTTAAGACACTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGCTCA 7144 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||| || ||||| || ||||| || || ||||| || Sbjct 7143 GACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAG 7084 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977 || || ||||| | |||||| |||||||||||||| Sbjct 7083 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAAGA 7049 >seq1750 Length=74028 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| ||||||| | || ||||| || || || || ||||| ||| ||| Sbjct 62010 ATGCAGATATTTGTTAAAACTCTTACAGGAAAGACAATCACTTTGGAAGTTGAAAGCTCT 62069 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||||||||||| || ||||| || |||||||| || Sbjct 62070 GACACAATTGACAATGTCAAAGCGAAAATACAAGACAAGGAAGGTATTCCTCCAGATCAG 62129 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| || |||||||| || ||| |||| || | || || || Sbjct 62130 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGAACATTGGCTGACTACAAC 62189 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 ||| |||||| | || | ||||| || Sbjct 62190 ATACAGAAAGAGTCCACCTTGCATTTGGT 62218 Score = 89.7 bits (98), Expect = 8e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || ||| | ||||| || || ||||| | ||||| || ||| Sbjct 61782 ATGCAGATTTTCGTCAAGACACTCACTGGGAAGACCATTACTCTTGAAGTTGAGAGTTCC 61841 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || ||||| ||||| || || ||||||||||| || ||||| || Sbjct 61842 GATACCATAGATAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCCCCAGATCAG 61901 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| || ||||| || || ||| | ||||| | | |||||||| Sbjct 61902 CAGAGGTTGATTTTTGCTGGAAAGCAACTTGAGGATGGCCGAACTCTGGCCGATTATAAC 61961 Query 156003 AT 156004 || Sbjct 61962 AT 61963 >seq1584 Length=77134 Score = 102 bits (112), Expect = 1e-16 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| | || ||| | || || |||||||||||||| || || || || || ||| || Sbjct 61731 AATGTAGATTTTTGTGAAGACTTTGACTGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 61672 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | |||| || || || ||| |||||||| || ||||| || || ||||| || Sbjct 61671 AGACACTATTGACAATGTCAAGGCTAAGATACAAGACAAGGAAGGTATCCCACCAGACCA 61612 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||| | || | ||| || || || || |||||| || ||| | ||||||| || Sbjct 61611 ACAAAGGGTTATCTTTGCAGGAAAACAACTTGAAGATGGAAGGACTCTTGCAGATTACAA 61552 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 ||| || ||| | || |||||| | ||| Sbjct 61551 TATCCAGAAGGAGTCTACCCTTCATCTGGTG 61521 >seq124414 Length=715 Score = 100 bits (110), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||| || ||||| || ||||| || ||||| || || ||| || Sbjct 286 ATGCAAATTTTTGTTAAGACTTTGACAGGTAAAACAATAACATTGGAGGTGGAAAGCTCG 227 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || || || || || || || || ||||| ||| Sbjct 226 GATACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAA 167 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||| || ||||||||||||||| | ||| | |||| ||||| Sbjct 166 CAGAGGTTGATCTTTGCAGGCAAGCAGCTCGAAGATGGTCGTACTCTTGCAGACTATAAC 107 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| | || || ||||| ||| Sbjct 106 ATCCAGAAGGAGTCCACCCTCCATTTGGTG 77 >seq13269 Length=14915 Score = 100 bits (110), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || || | ||||| || || || || | || ||||| || Sbjct 13893 AATGCAAATCTTTGTAAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTC 13952 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| ||| || || || ||||| || ||||||||||| || || ||||| || Sbjct 13953 TGATACAATTGACAATGTTAAGGCAAAAATTCAGGATAAAGAAGGTATTCCACCAGACCA 14012 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || |||| | || || || |||||||| ||| ||| ||||| | || ||||| Sbjct 14013 ACAGAGGCTGATATTCGCTGGAAAACAGCTCGAGGATGGCAGGACTTTGGCTGACTATAA 14072 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || |||||| | || |||||||| || Sbjct 14073 CATCCAGAAAGAGTCTACTCTTCATTTGGT 14102 >seq3871 Length=46552 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || |||||||||||||| || || || || || ||| || Sbjct 27095 AATGCAGATTTTTGTGAAGACTTTGACTGGAAAAACCATAACCTTGGAGGTTGAAAGCTC 27154 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 | | |||| || || || ||| |||||||| || ||||| || || | ||| || Sbjct 27155 AGGCACTATTGACAATGTCAAGGCTAAGATACAAGACAAGGAAGGTATCCCACTAGACCA 27214 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||| | || | || || ||||| || |||||| || ||| | |||||| | Sbjct 27215 ACAAAGGCTTATCTTTGTAGGAAAGCAACTTGAAGATGGAAGGACTCTTGTAGATTACA- 27273 Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 ||||||||| ||| | || |||||| | ||||| Sbjct 27274 -ATATCCAAAAGGAGTCTACCCTTCATCTGGTGTT 27307 >seq11270 Length=18388 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 ||||| ||||| ||| | ||||| |||| || || || ||||| || |||||| Sbjct 5488 CACGCGAAATCGCAGTGGAGGCCTTCGTCTCGCGAGATCAACTCGTTGGAGAAGGTTAAC 5547 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 |||||||||| || | ||||||||||||||||||| ||| |||| || ||||| Sbjct 5548 CCGGGCATTAACCCGCGCTTTTTTAGCCAAAATATCGCGCAGAAGCTACCGGAGAAGAAA 5607 Query 18278 ATACCCTCAACGCACGCGAACGCTAT 18303 || || || ||||| ||||| || || Sbjct 5608 ATGCCTTCGACGCAGGCGAAAGCGAT 5633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 730649874392400