Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq3441 127 4e-24
seq10846 125 1e-23
seq1750 122 2e-22
seq16751 120 5e-22
seq124414 113 8e-20
seq13269 104 4e-17
seq58530 95.1 2e-14
seq12926 95.1 2e-14
seq11477 91.5 3e-13
seq125639 87.8 3e-12
seq8957 86.0 1e-11
>seq3441
Length=50379
Score = 127 bits (140), Expect = 4e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||||| ||| || | || | || | ||| | ||| || || ||||||||||
Sbjct 13918 ACCACCTCGAAGGCGAAGGACAAGGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGC 13977
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || || | || ||||| || |||||||||||||| | ||||| ||||| |||||
Sbjct 13978 AAGAGTCCGCCCATCCTCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCGGGTGG 14037
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| || ||||| || || || ||| |||||| || || ||||| || ||| ||
Sbjct 14038 AATGCCCTCTTTGTCCTGAATCTTAGCTTTTACGTTGTCAATGGTATCAGAACTTTCCAC 14097
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| |||||||||||||| ||||| || | || ||||||||
Sbjct 14098 CTCCAGAGTTATGGTTTTACCAGTCAATGTCTTCACAAAAATCTGCAT 14145
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | || || | || || || | || | |||||| ||||| || ||
Sbjct 14828 ATTCCACCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCTTTCTGGATATTGTAGTCG 14887
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || ||| | || ||||||||||||||||| ||||| | || || || || |||
Sbjct 14888 GCAAGAGTTCGACCATCTTCCAATTGTTTACCAGCGAAAATGAGCCTTTGCTGATCTGGT 14947
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || || || || ||||| ||| ||||| |||||||| || |||
Sbjct 14948 GGGATTCCCTCCTTGTCCTGGATTTTCGCTTTCACATTGTCAATAGTATCGGAGCTTTCA 15007
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | ||||| | || ||||||||
Sbjct 15008 ACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATCTGCAT 15057
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || || || | |||| ||| || || ||||| |||
Sbjct 14600 ATACCACCACGGAGACGAAGCACCAAGTGGAGGGTAGACTCCTTTTGGATGTTATAGTCT 14659
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | || | || || | || || || |||||||| || ||||| ||||| |||
Sbjct 14660 GCAAGGGTACGACCATCTTCAAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGT 14719
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||||||||| || |||||| || ||||| || |||
Sbjct 14720 GGGATACCCTCTTTGTCTTGTATTTTTGCCTTGACATTATCAATGGTATCCGAGCTTTCC 14779
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || | || |||||||| ||||| | || || | ||||||||||||
Sbjct 14780 ACCTCCAAGGTGATGGTTTTTCCAGTCAGGGTCTTGACAAATATCTGCATT 14830
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||||||||| | | || || | || |||| || || |||||||| || | |||
Sbjct 14192 ATATTATAATCAGCAAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAATATCAGCCTC 14251
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| || || || || ||||| |||||||| || || |||||| ||||||
Sbjct 14252 TGCTGGTCCGGAGGGATCCCCTCTTTGTCTTGTATCTTTGCCTTGACATTATCAATAGTA 14311
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || ||| ||||| | || || ||||| ||||| || || || | || || |||
Sbjct 14312 TCAGAACTTTCAACTTCCAATGTTATAGTTTTTCCAGTCAAGGTCTTCACAAAAATTTGC 14371
Query 172068 ATT 172070
|||
Sbjct 14372 ATT 14374
>seq10846
Length=19378
Score = 125 bits (138), Expect = 1e-23
Identities = 138/184 (75%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || ||||| | ||| | || | | || ||||| || || ||||||||||| | ||
Sbjct 11320 AATGTTGTAATCAGCTAAGGTTCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCT 11379
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||||||||| ||||| || || ||||| ||||| || ||| ||| |||||| |||||
Sbjct 11380 CTGTTGGTCCGGTGGGATACCCTCTTTGTCTTGGATCTTAGCTTTGACATTATCAATAGT 11439
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | |||||||||||| ||||| || || |||| || || ||
Sbjct 11440 ATCAGAGCTCTCAACCTCCAAAGTAATGGTTTTTCCAGTCAAGGTCTTAACAAAAATTTG 11499
Query 172067 CATT 172070
||||
Sbjct 11500 CATT 11503
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | || | ||| | |||| ||| || ||||| ||||||
Sbjct 11045 ATTCCACCACGAAGGCGAAGCACCAGATGAAGGGTAGACTCCTTCTGTATATTGTAATCT 11104
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || | | | || || | || || || |||||||| | || || ||||| |||
Sbjct 11105 GCAAGAGTCCTTCCATCTTCAAGCTGCTTGCCTGCAAAAATAAGCCTTTGCTGGTCTGGT 11164
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
||||| ||||| || |||||||| || || ||||| ||||||||||| |||
Sbjct 11165 GGTATACCTTCCTTGTCTTGTATCTTTGCCTTCACATTGTCAATAGTATCTGAGCTTTCA 11224
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || | || |||||||| ||||| || || || | ||| |||||||||
Sbjct 11225 ACCTCCAAGGTTATGGTTTTCCCAGTCAAAGTCTTCACGAAAATCTGCATT 11275
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || || || | || | ||| || || ||||| ||
Sbjct 11957 ATACCACCACGGAGGCGGAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTATAGTCG 12016
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| || | || || | ||| ||||||||||| || || || || ||||| |||
Sbjct 12017 GCCAAAGTGCGACCATCTTCGAGTTGCTTACCAGCAAAGATCAACCTTTGCTGGTCTGGT 12076
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || ||||| || ||| ||| |||||| ||||| ||||| |||
Sbjct 12077 GGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATAGTGTCTGAGCTTTCG 12136
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || || || | || |||| || ||||||||
Sbjct 12137 ACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTAACAAAGATCTGCAT 12186
>seq1750
Length=74028
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || || || | || | || | |||| ||| || ||| ||||||||
Sbjct 62011 ATACCACCCCTGAGGCGGAGAACAAGGTGGAGTGTAGACTCCTTCTGAATGTTATAATCG 61952
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || ||| | || || | ||| || ||||||||||| || ||||| || || ||
Sbjct 61951 GCCAGAGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGG 61892
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| || || ||||| || |||||| ||| ||||| || ||
Sbjct 61891 GGAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTATCTATGGTATCGGAACTCTCA 61832
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||||||||| || ||||| | ||| || | ||| ||||||||
Sbjct 61831 ACTTCAAGAGTAATGGTCTTCCCAGTGAGTGTCTTGACGAAAATCTGCAT 61782
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | || ||||| || || | |||||| || || || ||
Sbjct 62239 ATTCCACCACGAAGGCGGAGGACCAAATGCAAGGTGGACTCTTTCTGTATGTTGTAGTCA 62180
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | ||| | || || | || || |||||||| || | ||||| || || ||
Sbjct 62179 GCCAATGTTCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGA 62120
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||||||||| ||| ||||| || || || || |||
Sbjct 62119 GGAATACCTTCCTTGTCTTGTATTTTCGCTTTGACATTGTCAATTGTGTCAGAGCTTTCA 62060
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| || || || || || | ||||||| |||||||||||
Sbjct 62059 ACTTCCAAAGTGATTGTCTTTCCTGTAAGAGTTTTAACAAATATCTGCAT 62010
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920
|| ||||| | ||||| |||||| || ||||| || | |||| | | || |||
Sbjct 62446 ACCAAATGAAGAGTAGACTCTTTCTGGATGTTATAGTCAGCCAAAGTCCTGCCCTCCTCC 62387
Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980
| ||||| |||||||| || | ||||||||||| ||||| || ||||| ||||| ||
Sbjct 62386 AGCTGTTTTCCAGCAAATATCAGCCTCTGTTGGTCTGGTGGAATACCTTCCTTATCCTGA 62327
Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040
||||| ||| || || || || || || || || || |||||||| || ||
Sbjct 62326 ATTTTTGCTTTGACGTTGTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTAATAGTCTTG 62267
Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || | || || ||||||
Sbjct 62266 CCAGTAAGGGTCTTTACAAAGATTTGCATT 62237
>seq16751
Length=10463
Score = 120 bits (132), Expect = 5e-22
Identities = 137/184 (74%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| ||||| | ||| | | | | || ||||| || || ||||||||||| | ||
Sbjct 6337 AATATTGTAATCGGCTAAGGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAGCCT 6396
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||||||||| ||||| || || || || ||||| || ||| ||| |||||| |||||
Sbjct 6397 CTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTAACATTATCGATAGT 6456
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
|||||| || || || | |||||| ||||| ||||| || || |||| || || ||
Sbjct 6457 ATCTGAACTCTCAACCTCCAAAGTAATTGTTTTGCCAGTCAAGGTCTTAACAAAAATTTG 6516
Query 172067 CATT 172070
||||
Sbjct 6517 CATT 6520
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||||||||| | || | || | || | || || ||||| || ||
Sbjct 6518 ATTCCACCTCTAAGTCGGAGCACCAGGTGGAGGGTGGATTCCTTTTGGATATTGTAGTCG 6577
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | || | || || | || || |||||||| || || ||||| ||||| |||
Sbjct 6578 GCTAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGT 6637
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || ||||| ||||| ||| |||||| || || || || ||
Sbjct 6638 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTATCGATGGTGTCGGAGCTCTCA 6697
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | |||||||||||||||||| || || || | || || ||||||
Sbjct 6698 ACTTCCAAAGTAATGGTTTTACCAGTCAAGGTCTTCACAAAAATTTGCATT 6748
Score = 87.8 bits (96), Expect = 3e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || | |||||| || ||||| || || ||||| ||||| ||||| || || || ||
Sbjct 6821 TCTTCAAGTTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTG 6880
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| ||||| ||| || ||| || || || || || ||||| | |||||||
Sbjct 6881 TCTTGAATTTTGGCTTTGACGTTATCAATGGTGTCAGAGCTCTCAACTTCCAAAGTAATG 6940
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| ||||| || || || | || || ||||||
Sbjct 6941 GTTTTTCCAGTCAAGGTCTTCACAAAAATTTGCATT 6976
>seq124414
Length=715
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || || || | |||| |||||| ||||| || ||
Sbjct 285 ATACCACCACGGAGACGAAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTGTAGTCG 344
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || ||| | || ||||||||||||||||| ||||| | || || || || |||
Sbjct 345 GCAAGAGTTCGACCATCTTCCAATTGTTTACCAGCGAAAATGAGCCTTTGCTGATCTGGT 404
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| || || || ||||| ||| ||||| |||||||| || |||
Sbjct 405 GGGATTCCTTCCTTGTCCTGGATTTTCGCTTTCACATTGTCAATAGTATCGGAGCTTTCA 464
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| || ||||| | ||||| | || ||||||||
Sbjct 465 ACCTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATCTGCAT 514
>seq13269
Length=14915
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || || || | || | || | |||| || || ||| || |||||
Sbjct 13667 ATACCACCCCTGAGGCGGAGAACAAGGTGGAGTGTAGATTCCTTCTGAATGTTGTAATCG 13608
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| ||| | || || | || || ||||| ||||| | ||||| || || ||
Sbjct 13607 GCCAAAGTTCGGCCATCCTCAAGCTGCTTTCCAGCGAAAATCAGCCTCTGCTGATCTGGG 13548
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||||||||| || || |||||| || |||||| ||| ||||| || ||
Sbjct 13547 GGAATTCCTTCTTTGTCCTGAATTTTAGCCTTCACATTATCTATTGTATCAGAACTCTCA 13488
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||||||||| || || || | ||| || | || ||||||||
Sbjct 13487 ACTTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACAAAAATCTGCAT 13438
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920
|| ||||| | ||||| |||||| || ||||| || | |||| | | || ||
Sbjct 14102 ACCAAATGAAGAGTAGACTCTTTCTGGATGTTATAGTCAGCCAAAGTCCTGCCATCCTCG 14043
Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980
| ||||| ||||| || || | ||||||||||| ||||| || ||||||||||| ||
Sbjct 14042 AGCTGTTTTCCAGCGAATATCAGCCTCTGTTGGTCTGGTGGAATACCTTCTTTATCCTGA 13983
Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040
||||| || ||||| || ||||| || || || || || || ||||| ||
Sbjct 13982 ATTTTTGCCTTAACATTGTCAATTGTATCAGAGCTCTCGACCTCAAGGGTGATGGTCTTG 13923
Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || | || || ||||||
Sbjct 13922 CCAGTAAGGGTCTTTACAAAGATTTGCATT 13893
>seq58530
Length=1747
Score = 95.1 bits (104), Expect = 2e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | ||| || | || | || | ||| | ||| || ||| |||||||| |
Sbjct 315 CCACCGCGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCG 256
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || | | || |||||||| || |||||||| || | |||||| || || || ||
Sbjct 255 AGAGTCCTCCCATCCTCCAATTGCTTCCCAGCAAAGATCAGTCTCTGCTGATCCGGAGGG 196
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
||||| || |||||||| || || || ||||| || ||||| || || ||
Sbjct 195 ATTCCCTCCTTATCTTGAATCTTCGCCTTCACATTGTCGATCGTATCAGAACTCTCCACC 136
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||||||| || || ||||| | || || | ||||||||||||
Sbjct 135 TCCAGAGTAATCGTCTTCCCAGTCAGAGTCTTCACGAATATCTGCAT 89
>seq12926
Length=15191
Score = 95.1 bits (104), Expect = 2e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | ||| || | || | || | ||| | ||| || ||| |||||||| |
Sbjct 69 CCACCGCGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCAGCG 128
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || | | || |||||||| || |||||||| || | ||||| || || || ||
Sbjct 129 AGAGTCCTCCCATCCTCCAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGAGGG 188
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
||||| || |||||||| || || || |||||| || ||||| || || ||
Sbjct 189 ATTCCCTCCTTATCTTGAATCTTCGCCTTCACATTATCGATCGTATCAGAACTCTCCACC 248
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||||||| || || ||||| | || || | ||||||||||||
Sbjct 249 TCCAGAGTAATCGTCTTCCCAGTCAGAGTCTTCACGAATATCTGCAT 295
Score = 87.8 bits (96), Expect = 3e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | || | || || ||||| | ||| | || || ||| ||||||||
Sbjct 294 ATACCTCCACGGAGCCTCAACACCAAATGCAGAGTCGATTCCTTCTGAATGTTATAATCG 353
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | || |||| |||||||||||||| || || || | ||||| ||||| ||
Sbjct 354 GCGAGGGTGCGACCGTCCTCCAATTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGG 413
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || || || || || || ||| || || || ||
Sbjct 414 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGCTCTCC 473
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || || || |||||||| || |||| ||||| | ||| |||||||| ||
Sbjct 474 ACCTCCAGGGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 526
>seq11477
Length=17588
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| |||||||| || |||||||| || | ||||| || || || || ||||| || |||
Sbjct 131 TCCTCCAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGGATTCCCTCCTTA 190
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| || || || |||||| || ||||| || || || || ||||||||
Sbjct 191 TCTTGAATCTTCGCCTTCACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTAATC 250
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| | || || | ||||||||||||
Sbjct 251 GTCTTCCCAGTCAGAGTCTTCACGAATATCTGCAT 285
>seq125639
Length=749
Score = 87.8 bits (96), Expect = 3e-12
Identities = 111/152 (73%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977
|||||||| || |||||||| || | ||||| || || || || ||||| ||| ||||
Sbjct 4 TCCAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGAGGGATTCCCTCT--ATCT 61
Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037
|| || || || |||||| || ||||| || || || || |||||||| ||
Sbjct 62 TGAATCTTCGCCTTCACATTATCGATCGTATCAGAAATCTCCACCTCCAGAGTAATCGTC 121
Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| | || |||| ||||||||||||
Sbjct 122 TTCCCAGTCAGAGTCTTAACGAATATCTGCAT 153
>seq8957
Length=24100
Score = 86.0 bits (94), Expect = 1e-11
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | ||| || | || | || | ||| | ||| || ||| |||||||| |
Sbjct 15051 CCACCACGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTATAATCAGCG 15110
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || | | || |||||||| || ||||| || || | ||||| || || || ||
Sbjct 15111 AGAGTCCTCCCATCCTCCAATTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCCGGAGGA 15170
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
||||| || |||||||| || || || |||||| || ||||| || || ||
Sbjct 15171 ATTCCCTCCTTATCTTGAATCTTCGCCTTCACATTATCGATCGTATCGGAGCTCTCCACC 15230
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||||||| || || || || | || || | ||||||||||||
Sbjct 15231 TCCAGAGTAATCGTCTTCCCCGTCAGAGTCTTCACGAATATCTGCAT 15277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903624547336200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |