Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_021297.1 Length=52057 Score E Sequences producing significant alignments: (Bits) Value seq81249 161 3e-35 >seq81249 Length=1001 Score = 161 bits (178), Expect = 3e-35 Identities = 131/159 (82%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 41083 GTACAGCCACGCGATCGAGTCGCGGACCTCGAACCCGGCGTCCTCGATCGCCGCCGCCAG 41142 ||| |||||||||||||||||||||| |||||| |||||||||||||| | || || || Sbjct 1 GTAGAGCCACGCGATCGAGTCGCGGATCTCGAATCCGGCGTCCTCGATTCCGGCAGCGAG 60 Query 41143 CCGGTGCCAGGTGCGCGGGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCCG 41202 ||||| ||||||| | |||||||||||||| || ||||| ||||| ||||||| || Sbjct 61 GCGGTGGAAGGTGCGAGTACCGCCGAAGGCGAGGAGCTGCCCGCCGGGTTTGAGGATGCG 120 Query 41203 TAGGCACTCGGATGCCCACTGCGTGGACCACTCCTGGAA 41241 |||||||||| ||||||||| | |||| | |||||| Sbjct 121 GAGGCACTCGGCGGCCCACTGCTCGCACCAGTGCTGGAA 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166196731684742