Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_021302.1 Length=47109 Score E Sequences producing significant alignments: (Bits) Value seq81249 132 1e-26 >seq81249 Length=1001 Score = 132 bits (146), Expect = 1e-26 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 38008 CAGTGGTGCGAGCGGTGGGCGGCTGAGTGTCTGCGTGTGTTGAAACCGGGCGGGCACATG 38067 || |||||||||| |||||| || ||||| || || | | ||||| |||||||| | Sbjct 153 CACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAACCCGGCGGGCAGCTC 94 Query 38068 TTGGCGTTCGGCGGTTCGCGCACCTGGCACCGGCTGGCGGCGGCGATCGAGGACGCCGGG 38127 | || ||||||||| | ||||||| ||||| || || || | |||||||||||||| Sbjct 93 CTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGAATCGAGGACGCCGGA 34 Query 38128 TTCGAGGTCCGCGACTCGATCGCCTGGCTGTAC 38160 |||||| |||||||||||||||| ||||| ||| Sbjct 33 TTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150388249622878