Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq109977 329 2e-85 seq86780 327 5e-85 seq62508 327 5e-85 seq94261 279 2e-70 seq114502 232 3e-56 seq81249 127 1e-24 seq109048 102 4e-17 >seq109977 Length=599 Score = 329 bits (364), Expect = 2e-85 Identities = 376/502 (75%), Gaps = 5/502 (1%) Strand=Plus/Minus Query 65370 TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCG 65429 |||||||| | ||||| || || ||||| ||||||||||||||| |||| ||||| || | Sbjct 581 TCGTCGTCATCGACTCCGTCGCAGCCCTCGTGCCGCGCGCCGAGATCGAGGGCGAGATGG 522 Query 65430 GGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCG 65489 | ||| |||||||||||| || || || |||||||||||||| | ||||||||||||| Sbjct 521 GTGACTCTCACGTCGGCCTCCAAGCTCGACTCATGTCGCAGGCGCTTCGCAAGCTCACCG 462 Query 65490 GCACCATCT-CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 65548 | || |||| ||| |||| || | ||| |||||||| |||||||||||||| Sbjct 461 GTGGTCTCAGCCAG-ACCCACACCACGATGATCTTCATCAACCAGCTGCGCGAGAAGATC 403 Query 65549 GGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 65608 ||| ||| || |||| ||||||||| ||||||||||||| ||| ||||||| Sbjct 402 GGC---GTGTTCTTCGGCAGCCCCGAGACCACGGCGGGCGGCAAGGCGCTGAAGTTCTAC 346 Query 65609 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 65668 || || || ||| | || |||| ||||||| || |||||| ||| || || ||| Sbjct 345 GCGTCCGTGCGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGCACCGACGCGGTC 286 Query 65669 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 65728 |||||||||||||| || |||||||||||||||||| |||| ||||| | | ||| Sbjct 285 GGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTTCAAGCAGGCC 226 Query 65729 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 65788 |||||| | || | ||||| | |||||||| || |||| | || ||||| | | | Sbjct 225 GAGTTCGACATCCTCTACGGCGTCGGCATCTCCCGCGAGGGCAGCCTGATCGACTTCGGC 166 Query 65789 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTC 65848 || ||| ||| | || ||||||||||||||||||| || ||||| || | | | | Sbjct 165 GTCGAGCACGGCATCGTCAAGAAGTCGGGCGCCTGGTACACGTACGAGGGCGACCAGCTG 106 Query 65849 GCTCAGGGCAAGCCCAAGGCCG 65870 | ||||||||| ||||||| Sbjct 105 GGCCAGGGCAAGGAGAAGGCCG 84 >seq86780 Length=899 Score = 327 bits (362), Expect = 5e-85 Identities = 500/705 (71%), Gaps = 13/705 (2%) Strand=Plus/Minus Query 65135 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 65194 || || ||||||||||| ||||| || || ||| | || || |||||||| | ||| Sbjct 882 GTCGAGATCTACGGCCCCGAATCGTCGGGCAAGACCACGCTCGCGCTCCACGCCATCGCC 823 Query 65195 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 65254 | |||||||||||||| |||| |||||| | | | || || ||||| | || || || Sbjct 822 GAGGCGCAGAAGGCCGGCGGCACCGCCGCGTTCGTGGATGCCGAGCATGCGCTCGATCCG 763 Query 65255 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGAC-AACCTCGTGGTGGTTCAGCCGGACAC 65313 | ||||||||| ||| || || || ||||| || ||| | || ||||| ||||| Sbjct 762 GTCTACGCCAAGAAGCTGGGCGTCAACATCGACGAAGCTCATCGTCAGCCAGCCCGACAC 703 Query 65314 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 65373 ||||||||||| |||||||||| ||| || || ||| || | | | | | Sbjct 702 GGGCGAGCAGGCGCTGGAGATCGCGGACACGCTGGTGCGGTCGAACGCGTCGACGTGC-T 644 Query 65374 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 65433 || | || || || ||||| ||||||||||| || ||| |||| ||||| || || || Sbjct 643 GGTGATCGATTCGGTCGCGGCGCTGGTGCCGCGGGCGGAGATCGAGGGCGAGATGGGCGA 584 Query 65434 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 65493 ||| || |||||||| || |||||||| ||| ||||| |||||||| |||| || | Sbjct 583 CAGCCATGTCGGCCTCCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGATCACGGGATC 524 Query 65494 CATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAA 65553 ||| | || |||| |||||| | ||| |||||||| | ||| ||||||||| Sbjct 523 GATCAGCCGCTCCAAGACGCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG--- 467 Query 65554 CGTGGGCTACGGC---CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGC 65610 |||| |||||| ||| || || |||||||||||||| || | | ||||||||| Sbjct 466 CGTGATGTACGGCAATCCG---GACACGACCACGGGCGGCAACGCGCTCAAGTTCTACGC 410 Query 65611 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGATGAGGCTGTCG 65669 || |||||| | || |||| |||| || | || ||||| | || || |||| Sbjct 409 GTCCGTCCGCCTCGACATCCGCCGCA-CGGGCCAGATCAAGGATCGTGACGATATCGTCG 351 Query 65670 GCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCG 65729 ||||| || || ||||||||||||||||||||| | || |||||| | | | || Sbjct 350 GCAACACGACGCGCGTGAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCG 291 Query 65730 AGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCG 65789 ||||| | || |||| || |||||| | || | || ||| ||||||| || | || Sbjct 290 AGTTCGACATCATGTATGGCGAGGGCGTGTCCAAGGTGGGCGAGATCCTCGATCTCGGCG 231 Query 65790 TGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65834 | | ||| ||||| |||| |||||||| ||||||| |||| Sbjct 230 TCAAGGCGGGGCTGGTCGAGAAATCGGGCGCGTGGTTCAGCTACG 186 >seq62508 Length=1551 Score = 327 bits (362), Expect = 5e-85 Identities = 528/753 (70%), Gaps = 17/753 (2%) Strand=Plus/Minus Query 65090 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65149 |||||| ||| |||||| |||| || ||| | ||||| ||| | || |||| || Sbjct 1319 CTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGTGTGATCGAGGTCTATGGT 1260 Query 65150 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65209 || || || || || ||| | || || || |||| | ||| | |||||||| | Sbjct 1259 CCCGAGTCGTCGGGCAAGACGACGCTCGCGCTGCACGTCATCGCCGAGTCGCAGAAGAAC 1200 Query 65210 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65269 || |||| ||||||| | ||||||| |||||| | || ||||| | || |||||| Sbjct 1199 GGCGGCACTGCCGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGGTCTATGCCAAGAAA 1140 Query 65270 CTCGGT-GTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 65328 || || || || |||| | || | ||| ||||| ||||| ||||| ||||| || Sbjct 1139 CTTGGGCGTCAACATCGATGAGCTGATCGTGTCGCAGCCCGACACCGGCGAACAGGCGCT 1080 Query 65329 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 65388 ||||||||| ||| || ||| || || | | | | | || || || || || Sbjct 1079 GGAGATCGTCGACACGCTGGTCCGCTCCAACGCGATCGACGTGCTGGTGGTCGATTCGGT 1020 Query 65389 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 65448 || || |||||||||||||| ||| |||| ||||| || || ||||| ||||||||||| Sbjct 1019 CGCCGCGCTGGTGCCGCGCGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCT 960 Query 65449 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCAC--- 65505 || ||||| || ||||||||| | |||||||||| || ||| | ||| | || | Sbjct 959 TCAGGCGCGGCTGATGTCGCAGAGCTTGCGCAAGCTGACGGGCTCGATCAGCCGCTCGCG 900 Query 65506 CAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGG 65565 | || | ||| ||| |||||||| | ||| |||||||||| ||| ||||| Sbjct 899 CTGCATGGTGA---TCTTCATCAACCAGCTCCGCATGAAGATCGGC---GTGATGTACGG 846 Query 65566 CCCGAAC---GAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCAT 65622 | ||| ||||| ||||| |||||||| || ||| ||||||||||| || ||| | Sbjct 845 C---AACCCGGAGACGACCACCGGCGGCAACGCGCTGAAATTCTACGCCTCGGTTCGCCT 789 Query 65623 GGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCG 65682 || |||| |||| || | | ||||| |||| |||| ||||||||| ||||| Sbjct 788 CGACATCCGCCGCACCGGCGCGATCAAGGATCGCGACGAGGTCGTCGGCAACGCGACCCG 729 Query 65683 GGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGT 65742 |||||||| |||||||||||| | || |||||| | | | ||||||| | || | Sbjct 728 CGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCAT 669 Query 65743 GTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCC 65801 |||||| |||||| | || || | ||| |||||||||| | ||| | || | Sbjct 668 GTACGGCGAGGGCGTTCAGCAAGATCGGCGAGATCCTCGACCTCGGCGTCAAGGCCGGGC 609 Query 65802 TGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65834 |||| ||||||||||||| ||||||| |||| Sbjct 608 TGGTCGAGAAGTCGGGCGCGTGGTTCAGCTACG 576 >seq94261 Length=791 Score = 279 bits (308), Expect = 2e-70 Identities = 429/609 (70%), Gaps = 5/609 (1%) Strand=Plus/Plus Query 65221 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 65280 ||||| | | || || |||||| |||| || || |||||| |||||| || | Sbjct 6 CGCCTTCGTGGATGCCGAGCACGCCCTCGATCCGATCTACGCCCGCAAGCTCGGCGTCAA 65 Query 65281 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 65340 |||||| |||| || | ||||| ||||| ||||||||||| ||||||||| || Sbjct 66 TCTCGACGACCTGCTGATCTCGCAGCCCGACACCGGCGAGCAGGCGCTGGAGATCACCGA 125 Query 65341 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 65400 | || || || |||| | | | | | || || || || |||||||| ||| Sbjct 126 CACGCTGGTGCGCTCCGGCGCGATCGACGTGCTGGTGGTCGATTCGGTGGCGGCGCTGAC 185 Query 65401 GCC-GCGCGCCGAGCTCGAAGGCGACATCGGGGAC-AGTCACGTCGGCCTGCACGCGCGC 65458 ||| ||| |||||| |||| ||||| || || ||| || || |||||| || || ||| Sbjct 186 GCCCGCGGGCCGAGATCGAGGGCGAGATGGGCGACGAGCCAGCCCGGCCTCCAGGCCCGC 245 Query 65459 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACG 65518 || ||| |||||| |||||||||||||||| | ||||| || | ||| || | Sbjct 246 CTGATGAGCCAGGCCCTGCGCAAGCTCACCGGTTCGATCTCGCGCTCGAACTGCATGGTG 305 Query 65519 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACC 65578 ||| |||||||| | || |||||||||| ||| |||||| || ||||||| Sbjct 306 ATCTTCATCAACCAGATCCGGATGAAGATCGGC---GTGATGTACGGCTCGCCCGAGACC 362 Query 65579 ACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 65638 || || |||||||| || ||| |||||||||||| |||||| | || |||| |||||| Sbjct 363 ACGACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTCCGCCTCGACATCCGCCGCATC 422 Query 65639 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAG 65698 | ||| |||||| |||| ||||| ||||||||| ||| || |||||||| ||| Sbjct 423 TCGACCCTGAAGGACCGCGACGAGGCGATCGGCAACCAGGTCCGCGTCAAGGTCGTGAAG 482 Query 65699 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 65758 |||||| | || |||||| | | | ||||||| | || ||| ||| |||||| | Sbjct 483 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCATGTTCGGCGAGGGCGTG 542 Query 65759 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 65818 ||| | | ||| || ||||||| | ||| | ||| | || ||||||| ||| Sbjct 543 TCGAAGGTCGGCGAGCTGATCGACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGC 602 Query 65819 GCCTGGTTC 65827 ||||||||| Sbjct 603 GCCTGGTTC 611 >seq114502 Length=552 Score = 232 bits (256), Expect = 3e-56 Identities = 392/561 (70%), Gaps = 24/561 (4%) Strand=Plus/Plus Query 65063 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 65122 || || || || |||| || | | | ||||| || ||||||||||| || | ||| Sbjct 1 GAGGTGATCCCGTCCGGGTCCCTGGGTTTGGACCTGGCGCTGGGCATCGGCGGCTTGCCG 60 Query 65123 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 65182 ||||||| | | || |||||||| || ||| || || ||| | || || ||| Sbjct 61 CGGGGCCGCATCATCGAGATCTACGGGCCGGAAAGCTCCGGCAAGACCACGTTGGCGCTC 120 Query 65183 CACGCGGTGGCCAATGCGCAGAAGGCC--GGTGGCAACGCCGCCTACATCGACGCTGAGC 65240 |||||| | ||| | |||||| ||| || |||| | |||| |||||| || |||| Sbjct 121 CACGCGATTGCCGAAGCGCAG--CGCCGGGGCGGCACCTGTGCCTTCATCGATGCGGAGC 178 Query 65241 ACTCCCTGGACCCTGAGTACGC---CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGG 65297 || | |||||||| ||||| ||| ||| || |||||| | ||||||||| || Sbjct 179 ACGCGCTGGACCCGATCTACGCGCGCAA---GCTGGGCGTGGACGTGGACAACCTCCTGC 235 Query 65298 TGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 65357 || ||||||||| ||| |||||||| |||||||||| ||| || || || | Sbjct 236 TGAGCCAGCCGGACGGTGGTGAGCAGGCGCTGGAGATCGCAGACACGCTGGTTCGCTCGG 295 Query 65358 GCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 65417 ||| | | | | || || ||| || ||||| ||||||||||| || || || | Sbjct 296 GCGCCATCGACGTGCTGGTGGTGGACAGCGTCGCGGCGCTGGTGCCGCGGGCGGAACTGG 355 Query 65418 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGC 65477 ||||||| || || ||||| |||||||||||||| || || |||||| |||||| ||| Sbjct 356 AAGGCGAGATGGGCGACAGCCACGTCGGCCTGCATGCCCGGCTCATGAGCCAGGCCCTGC 415 Query 65478 GCAAGCTCACCGGCACCATCTCCAGCAC---CAACACGCTGACGCTCTGGGTCAACCAGT 65534 ||||||| || |||| | | | | | || || ||| | ||| |||||||| Sbjct 416 GCAAGCTGACGGGCAGCGTGGCGCGGTCGCGCACCATGCTCA---TCTTCCTCAACCAGA 472 Query 65535 TGCGCGAGAAGATCGGC--AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAA 65592 | || |||||||||| | || ||| || |||||| ||||||||||||||||| Sbjct 473 TCCGGTTGAAGATCGGCGTGATGTCGGCAAC--CCCGAA----ACCACCACGGGCGGCAA 526 Query 65593 GGCTTTGAGGTTCTACGCCTC 65613 || ||| ||||||||| || Sbjct 527 CGCGCTGAAGTTCTACGCGTC 547 >seq81249 Length=1001 Score = 127 bits (140), Expect = 1e-24 Identities = 205/288 (71%), Gaps = 14/288 (5%) Strand=Plus/Minus Query 58280 TCCACCTCGGCGACTGCCGGGACATCCTCGCCGAACTTGAA-GACGCCAGCGTCGACTCC 58338 || ||||||||||||||| ||| ||||| | ||| || |||| |||||| || || Sbjct 287 TCTACCTCGGCGACTGCCTCGACGTCCTC-CGGAAGCTGCCCGACGGCAGCGTGCACGCC 229 Query 58339 ATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGACGGCTCGGGC 58398 |||||||||| |||||||||| || | ||||||||| | ||||| ||| | Sbjct 228 GTCGTCACCGATCCGCCCTACGCCCTCGACTTCATGGGCCACGGCTGGGATCGCTACACC 169 Query 58399 ATCGCC---TTCGAT-----GT-CGAGATGTGGGA-GC--AATGTCTGCGGGTCCTCAAG 58446 || | ||| | || |||| ||||| || | || || || ||||||| Sbjct 168 CCCGGCGAGTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAA 109 Query 58447 CCGGGTGGGCACCTGCTCGCCTTCGGTGGCTCCCGCACCTGGCACCGGCTGACCGTGGCC 58506 || || ||||| || ||||||||||| || | ||||||| ||||| || | | | Sbjct 108 CCCGGCGGGCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGA 49 Query 58507 ATCGAGGACGCGGGCTTCGAGATTCGTGACTCCATCGCCTGGCTCTAC 58554 ||||||||||| || |||||||| || ||||| ||||| ||||||||| Sbjct 48 ATCGAGGACGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 >seq109048 Length=609 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 59732 CTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAG 59791 |||||||||||||| ||||||||| |||||||| |||||||||||||||||| | || Sbjct 602 CTCAAGCAGCGCTCGTTCGAGACCCGTGAGGGCGAGAAGCGCACCGTCATCGAGCTCGAC 543 Query 59792 GTAGACGAGATCGGCCCGTCGCTG 59815 || || ||| |||||||||||||| Sbjct 542 GTCGAGGAGGTCGGCCCGTCGCTG 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241836020825213