Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_022085.1 Length=76483 Score E Sequences producing significant alignments: (Bits) Value seq109977 333 1e-86 seq86780 327 6e-85 seq62508 327 6e-85 seq94261 279 3e-70 seq114502 232 3e-56 seq81249 140 2e-28 seq109048 102 4e-17 >seq109977 Length=599 Score = 333 bits (368), Expect = 1e-86 Identities = 377/502 (75%), Gaps = 5/502 (1%) Strand=Plus/Minus Query 66452 TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCG 66511 |||||||| | ||||| || || ||||| ||||||||||||||| |||| ||||| || | Sbjct 581 TCGTCGTCATCGACTCCGTCGCAGCCCTCGTGCCGCGCGCCGAGATCGAGGGCGAGATGG 522 Query 66512 GGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCG 66571 | ||| |||||||||||| || || || |||||||||||||| | ||||||||||||| Sbjct 521 GTGACTCTCACGTCGGCCTCCAAGCTCGACTCATGTCGCAGGCGCTTCGCAAGCTCACCG 462 Query 66572 GCACCATCT-CCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 66630 | || |||| ||| |||| || | ||| |||||||| |||||||||||||| Sbjct 461 GTGGTCTCAGCCAG-ACCCACACCACGATGATCTTCATCAACCAGCTGCGCGAGAAGATC 403 Query 66631 GGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 66690 ||| ||| || |||| ||||||||| ||||||||||||| ||| ||||||| Sbjct 402 GGC---GTGTTCTTCGGCAGCCCCGAGACCACGGCGGGCGGCAAGGCGCTGAAGTTCTAC 346 Query 66691 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 66750 || || || ||| | || |||| ||||||| || |||||| ||| || || ||| Sbjct 345 GCGTCCGTGCGCCTCGACATCCGCCGCATCGAGACGCTGAAGGACGGCACCGACGCGGTC 286 Query 66751 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 66810 |||||||||||||| || |||||||||||||||||| |||| ||||| | | ||| Sbjct 285 GGCAACCGCACCCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTTCAAGCAGGCC 226 Query 66811 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 66870 |||||| | || | ||||| | |||||||| || |||| | || ||||| | | | Sbjct 225 GAGTTCGACATCCTCTACGGCGTCGGCATCTCCCGCGAGGGCAGCCTGATCGACTTCGGC 166 Query 66871 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTC 66930 || ||| ||| | || ||||||||||||||||||| || ||||| || | | | | Sbjct 165 GTCGAGCACGGCATCGTCAAGAAGTCGGGCGCCTGGTACACGTACGAGGGCGACCAGCTG 106 Query 66931 GCCCAGGGCAAGCCCAAGGCCG 66952 | |||||||||| ||||||| Sbjct 105 GGCCAGGGCAAGGAGAAGGCCG 84 >seq86780 Length=899 Score = 327 bits (362), Expect = 6e-85 Identities = 500/705 (71%), Gaps = 13/705 (2%) Strand=Plus/Minus Query 66217 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66276 || || ||||||||||| ||||| || || ||| | || || |||||||| | ||| Sbjct 882 GTCGAGATCTACGGCCCCGAATCGTCGGGCAAGACCACGCTCGCGCTCCACGCCATCGCC 823 Query 66277 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 66336 | |||||||||||||| |||| |||||| | | | || || ||||| | || || || Sbjct 822 GAGGCGCAGAAGGCCGGCGGCACCGCCGCGTTCGTGGATGCCGAGCATGCGCTCGATCCG 763 Query 66337 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGAC-AACCTCGTGGTGGTTCAGCCGGACAC 66395 | ||||||||| ||| || || || ||||| || ||| | || ||||| ||||| Sbjct 762 GTCTACGCCAAGAAGCTGGGCGTCAACATCGACGAAGCTCATCGTCAGCCAGCCCGACAC 703 Query 66396 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66455 ||||||||||| |||||||||| ||| || || ||| || | | | | | Sbjct 702 GGGCGAGCAGGCGCTGGAGATCGCGGACACGCTGGTGCGGTCGAACGCGTCGACGTGC-T 644 Query 66456 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 66515 || | || || || ||||| ||||||||||| || ||| |||| ||||| || || || Sbjct 643 GGTGATCGATTCGGTCGCGGCGCTGGTGCCGCGGGCGGAGATCGAGGGCGAGATGGGCGA 584 Query 66516 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCAC 66575 ||| || |||||||| || |||||||| ||| ||||| |||||||| |||| || | Sbjct 583 CAGCCATGTCGGCCTCCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGATCACGGGATC 524 Query 66576 CATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAA 66635 ||| | || |||| |||||| | ||| |||||||| | ||| ||||||||| Sbjct 523 GATCAGCCGCTCCAAGACGCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG--- 467 Query 66636 CGTGGGCTACGGC---CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGC 66692 |||| |||||| ||| || || |||||||||||||| || | | ||||||||| Sbjct 466 CGTGATGTACGGCAATCCG---GACACGACCACGGGCGGCAACGCGCTCAAGTTCTACGC 410 Query 66693 CTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGATGAGGCTGTCG 66751 || |||||| | || |||| |||| || | || ||||| | || || |||| Sbjct 409 GTCCGTCCGCCTCGACATCCGCCGCA-CGGGCCAGATCAAGGATCGTGACGATATCGTCG 351 Query 66752 GCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCG 66811 ||||| || || ||||||||||||||||||||| | || |||||| | | | || Sbjct 350 GCAACACGACGCGCGTGAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCG 291 Query 66812 AGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCG 66871 ||||| | || |||| || |||||| | || | || ||| ||||||| || | || Sbjct 290 AGTTCGACATCATGTATGGCGAGGGCGTGTCCAAGGTGGGCGAGATCCTCGATCTCGGCG 231 Query 66872 TGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66916 | | ||| ||||| |||| |||||||| ||||||| |||| Sbjct 230 TCAAGGCGGGGCTGGTCGAGAAATCGGGCGCGTGGTTCAGCTACG 186 >seq62508 Length=1551 Score = 327 bits (362), Expect = 6e-85 Identities = 528/753 (70%), Gaps = 17/753 (2%) Strand=Plus/Minus Query 66172 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66231 |||||| ||| |||||| |||| || ||| | ||||| ||| | || |||| || Sbjct 1319 CTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGTGTGATCGAGGTCTATGGT 1260 Query 66232 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66291 || || || || || ||| | || || || |||| | ||| | |||||||| | Sbjct 1259 CCCGAGTCGTCGGGCAAGACGACGCTCGCGCTGCACGTCATCGCCGAGTCGCAGAAGAAC 1200 Query 66292 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66351 || |||| ||||||| | ||||||| |||||| | || ||||| | || |||||| Sbjct 1199 GGCGGCACTGCCGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGGTCTATGCCAAGAAA 1140 Query 66352 CTCGGT-GTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 66410 || || || || |||| | || | ||| ||||| ||||| ||||| ||||| || Sbjct 1139 CTTGGGCGTCAACATCGATGAGCTGATCGTGTCGCAGCCCGACACCGGCGAACAGGCGCT 1080 Query 66411 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGT 66470 ||||||||| ||| || ||| || || | | | | | || || || || || Sbjct 1079 GGAGATCGTCGACACGCTGGTCCGCTCCAACGCGATCGACGTGCTGGTGGTCGATTCGGT 1020 Query 66471 GGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCT 66530 || || |||||||||||||| ||| |||| ||||| || || ||||| ||||||||||| Sbjct 1019 CGCCGCGCTGGTGCCGCGCGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCT 960 Query 66531 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCAC--- 66587 || ||||| || ||||||||| | |||||||||| || ||| | ||| | || | Sbjct 959 TCAGGCGCGGCTGATGTCGCAGAGCTTGCGCAAGCTGACGGGCTCGATCAGCCGCTCGCG 900 Query 66588 CAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGG 66647 | || | ||| ||| |||||||| | ||| |||||||||| ||| ||||| Sbjct 899 CTGCATGGTGA---TCTTCATCAACCAGCTCCGCATGAAGATCGGC---GTGATGTACGG 846 Query 66648 CCCGAAC---GAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCAT 66704 | ||| ||||| ||||| |||||||| || ||| ||||||||||| || ||| | Sbjct 845 C---AACCCGGAGACGACCACCGGCGGCAACGCGCTGAAATTCTACGCCTCGGTTCGCCT 789 Query 66705 GGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCG 66764 || |||| |||| || | | ||||| |||| |||| ||||||||| ||||| Sbjct 788 CGACATCCGCCGCACCGGCGCGATCAAGGATCGCGACGAGGTCGTCGGCAACGCGACCCG 729 Query 66765 GGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGT 66824 |||||||| |||||||||||| | || |||||| | | | ||||||| | || | Sbjct 728 CGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCAT 669 Query 66825 GTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCC 66883 |||||| |||||| | || || | ||| |||||||||| | ||| | || | Sbjct 668 GTACGGCGAGGGCGTTCAGCAAGATCGGCGAGATCCTCGACCTCGGCGTCAAGGCCGGGC 609 Query 66884 TGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 66916 |||| ||||||||||||| ||||||| |||| Sbjct 608 TGGTCGAGAAGTCGGGCGCGTGGTTCAGCTACG 576 >seq94261 Length=791 Score = 279 bits (308), Expect = 3e-70 Identities = 429/609 (70%), Gaps = 5/609 (1%) Strand=Plus/Plus Query 66303 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 66362 ||||| | | || || |||||| |||| || || |||||| |||||| || | Sbjct 6 CGCCTTCGTGGATGCCGAGCACGCCCTCGATCCGATCTACGCCCGCAAGCTCGGCGTCAA 65 Query 66363 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66422 |||||| |||| || | ||||| ||||| ||||||||||| ||||||||| || Sbjct 66 TCTCGACGACCTGCTGATCTCGCAGCCCGACACCGGCGAGCAGGCGCTGGAGATCACCGA 125 Query 66423 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 66482 | || || || |||| | | | | | || || || || |||||||| ||| Sbjct 126 CACGCTGGTGCGCTCCGGCGCGATCGACGTGCTGGTGGTCGATTCGGTGGCGGCGCTGAC 185 Query 66483 GCC-GCGCGCCGAGCTCGAAGGCGACATCGGGGAC-AGTCACGTCGGCCTGCACGCGCGC 66540 ||| ||| |||||| |||| ||||| || || ||| || || |||||| || || ||| Sbjct 186 GCCCGCGGGCCGAGATCGAGGGCGAGATGGGCGACGAGCCAGCCCGGCCTCCAGGCCCGC 245 Query 66541 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACG 66600 || ||| |||||| |||||||||||||||| | ||||| || | ||| || | Sbjct 246 CTGATGAGCCAGGCCCTGCGCAAGCTCACCGGTTCGATCTCGCGCTCGAACTGCATGGTG 305 Query 66601 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACC 66660 ||| |||||||| | || |||||||||| ||| |||||| || ||||||| Sbjct 306 ATCTTCATCAACCAGATCCGGATGAAGATCGGC---GTGATGTACGGCTCGCCCGAGACC 362 Query 66661 ACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 66720 || || |||||||| || ||| |||||||||||| |||||| | || |||| |||||| Sbjct 363 ACGACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTCCGCCTCGACATCCGCCGCATC 422 Query 66721 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAG 66780 | ||| |||||| |||| ||||| ||||||||| ||| || |||||||| ||| Sbjct 423 TCGACCCTGAAGGACCGCGACGAGGCGATCGGCAACCAGGTCCGCGTCAAGGTCGTGAAG 482 Query 66781 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 66840 |||||| | || |||||| | | | ||||||| | || ||| ||| |||||| | Sbjct 483 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAGTTCGACATCATGTTCGGCGAGGGCGTG 542 Query 66841 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 66900 ||| | | ||| || ||||||| | ||| | ||| | || ||||||| ||| Sbjct 543 TCGAAGGTCGGCGAGCTGATCGACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGC 602 Query 66901 GCCTGGTTC 66909 ||||||||| Sbjct 603 GCCTGGTTC 611 >seq114502 Length=552 Score = 232 bits (256), Expect = 3e-56 Identities = 392/561 (70%), Gaps = 24/561 (4%) Strand=Plus/Plus Query 66145 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 66204 || || || || |||| || | | | ||||| || ||||||||||| || | ||| Sbjct 1 GAGGTGATCCCGTCCGGGTCCCTGGGTTTGGACCTGGCGCTGGGCATCGGCGGCTTGCCG 60 Query 66205 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 66264 ||||||| | | || |||||||| || ||| || || ||| | || || ||| Sbjct 61 CGGGGCCGCATCATCGAGATCTACGGGCCGGAAAGCTCCGGCAAGACCACGTTGGCGCTC 120 Query 66265 CACGCGGTGGCCAATGCGCAGAAGGCC--GGTGGCAACGCCGCCTACATCGACGCTGAGC 66322 |||||| | ||| | |||||| ||| || |||| | |||| |||||| || |||| Sbjct 121 CACGCGATTGCCGAAGCGCAG--CGCCGGGGCGGCACCTGTGCCTTCATCGATGCGGAGC 178 Query 66323 ACTCCCTGGACCCTGAGTACGC---CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGG 66379 || | |||||||| ||||| ||| ||| || |||||| | ||||||||| || Sbjct 179 ACGCGCTGGACCCGATCTACGCGCGCAA---GCTGGGCGTGGACGTGGACAACCTCCTGC 235 Query 66380 TGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTG 66439 || ||||||||| ||| |||||||| |||||||||| ||| || || || | Sbjct 236 TGAGCCAGCCGGACGGTGGTGAGCAGGCGCTGGAGATCGCAGACACGCTGGTTCGCTCGG 295 Query 66440 GCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66499 ||| | | | | || || ||| || ||||| ||||||||||| || || || | Sbjct 296 GCGCCATCGACGTGCTGGTGGTGGACAGCGTCGCGGCGCTGGTGCCGCGGGCGGAACTGG 355 Query 66500 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGC 66559 ||||||| || || ||||| |||||||||||||| || || |||||| |||||| ||| Sbjct 356 AAGGCGAGATGGGCGACAGCCACGTCGGCCTGCATGCCCGGCTCATGAGCCAGGCCCTGC 415 Query 66560 GCAAGCTCACCGGCACCATCTCCAGCAC---CAACACGCTGACGCTCTGGGTCAACCAGT 66616 ||||||| || |||| | | | | | || || ||| | ||| |||||||| Sbjct 416 GCAAGCTGACGGGCAGCGTGGCGCGGTCGCGCACCATGCTCA---TCTTCCTCAACCAGA 472 Query 66617 TGCGCGAGAAGATCGGC--AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAA 66674 | || |||||||||| | || ||| || |||||| ||||||||||||||||| Sbjct 473 TCCGGTTGAAGATCGGCGTGATGTCGGCAAC--CCCGAA----ACCACCACGGGCGGCAA 526 Query 66675 GGCTTTGAGGTTCTACGCCTC 66695 || ||| ||||||||| || Sbjct 527 CGCGCTGAAGTTCTACGCGTC 547 >seq81249 Length=1001 Score = 140 bits (154), Expect = 2e-28 Identities = 208/288 (72%), Gaps = 14/288 (5%) Strand=Plus/Minus Query 58698 TCCACCTCGGCGACTGCCGGGATATCCTCGCCGAACTTGAA-GACGCCAGCGTCGACTCC 58756 || ||||||||||||||| || ||||| | ||| || |||| |||||| || || Sbjct 287 TCTACCTCGGCGACTGCCTCGACGTCCTC-CGGAAGCTGCCCGACGGCAGCGTGCACGCC 229 Query 58757 ATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGACGGCT---CG 58813 |||||||||| |||||||||| || | ||||||||| | ||||| ||| | Sbjct 228 GTCGTCACCGATCCGCCCTACGCCCTCGACTTCATGGGCCACGGCTGGGATCGCTACACC 169 Query 58814 GGCATCGCTTTCGAT-----GT-CGAGATGTGGGA-GC--AATGTCTGCGGGTCCTCAAG 58864 | || ||| | || |||| ||||| || | || || || ||||||| Sbjct 168 CCCGGCGAGTTCCAGCACTGGTGCGAGCAGTGGGCCGCCGAGTGCCTCCGCATCCTCAAA 109 Query 58865 CCCGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTCGCGTCGGCC 58924 ||||| ||||| || |||||||||||||| | ||||||| ||||| ||||| | | Sbjct 108 CCCGGCGGGCAGCTCCTCGCCTTCGGCGGTACTCGCACCTTCCACCGCCTCGCTGCCGGA 49 Query 58925 ATCGAGGACGCGGGCTTCGAGATTCGTGACTCCATCGCCTGGCTCTAC 58972 ||||||||||| || |||||||| || ||||| ||||| ||||||||| Sbjct 48 ATCGAGGACGCCGGATTCGAGATCCGCGACTCGATCGCGTGGCTCTAC 1 >seq109048 Length=609 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60036 CTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCGACAAGCGCACCGTCATCGAGGTGGAG 60095 |||||||||||||| ||||||||| |||||||| |||||||||||||||||| | || Sbjct 602 CTCAAGCAGCGCTCGTTCGAGACCCGTGAGGGCGAGAAGCGCACCGTCATCGAGCTCGAC 543 Query 60096 GTAGACGAGATCGGCCCGTCGCTG 60119 || || ||| |||||||||||||| Sbjct 542 GTCGAGGAGGTCGGCCCGTCGCTG 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244222528976876